Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0350 and EX28DRAFT_0351 are separated by 11 nucleotides EX28DRAFT_0351 and EX28DRAFT_0352 are separated by 105 nucleotides EX28DRAFT_0352 and EX28DRAFT_0353 overlap by 1 nucleotides
EX28DRAFT_0350: EX28DRAFT_0350 - glycerol-3-phosphate transporter, at 313,886 to 315,238
_0350
EX28DRAFT_0351: EX28DRAFT_0351 - Glycerophosphoryl diester phosphodiesterase, at 315,250 to 316,308
_0351
EX28DRAFT_0352: EX28DRAFT_0352 - Ferredoxin, at 316,414 to 316,668
_0352
EX28DRAFT_0353: EX28DRAFT_0353 - Ribonucleotide reductase, beta subunit, at 316,668 to 317,798
_0353
Position (kb) 315
316
317 Strain fitness (log2 ratio) -1
0
1
2
3
4
5 at 314.252 kb on - strand, within EX28DRAFT_0350 at 314.252 kb on - strand, within EX28DRAFT_0350 at 314.252 kb on - strand, within EX28DRAFT_0350 at 314.456 kb on + strand, within EX28DRAFT_0350 at 314.456 kb on + strand, within EX28DRAFT_0350 at 314.457 kb on - strand, within EX28DRAFT_0350 at 314.457 kb on - strand, within EX28DRAFT_0350 at 314.457 kb on - strand, within EX28DRAFT_0350 at 314.457 kb on - strand, within EX28DRAFT_0350 at 314.457 kb on - strand, within EX28DRAFT_0350 at 314.458 kb on + strand, within EX28DRAFT_0350 at 314.459 kb on - strand, within EX28DRAFT_0350 at 314.459 kb on - strand, within EX28DRAFT_0350 at 314.576 kb on + strand, within EX28DRAFT_0350 at 314.628 kb on - strand, within EX28DRAFT_0350 at 314.682 kb on - strand, within EX28DRAFT_0350 at 314.777 kb on + strand, within EX28DRAFT_0350 at 314.777 kb on + strand, within EX28DRAFT_0350 at 314.783 kb on + strand, within EX28DRAFT_0350 at 314.784 kb on - strand, within EX28DRAFT_0350 at 314.869 kb on + strand, within EX28DRAFT_0350 at 314.869 kb on + strand, within EX28DRAFT_0350 at 314.870 kb on - strand, within EX28DRAFT_0350 at 314.932 kb on - strand, within EX28DRAFT_0350 at 314.969 kb on + strand, within EX28DRAFT_0350 at 314.969 kb on + strand, within EX28DRAFT_0350 at 315.102 kb on - strand, within EX28DRAFT_0350 at 315.108 kb on + strand at 315.108 kb on + strand at 315.109 kb on - strand at 315.169 kb on - strand at 315.236 kb on + strand at 315.262 kb on + strand at 315.262 kb on + strand at 315.262 kb on + strand at 315.263 kb on - strand at 315.266 kb on + strand at 315.267 kb on - strand at 315.331 kb on - strand at 315.369 kb on + strand, within EX28DRAFT_0351 at 315.369 kb on + strand, within EX28DRAFT_0351 at 315.412 kb on + strand, within EX28DRAFT_0351 at 315.412 kb on + strand, within EX28DRAFT_0351 at 315.472 kb on + strand, within EX28DRAFT_0351 at 315.473 kb on - strand, within EX28DRAFT_0351 at 315.670 kb on - strand, within EX28DRAFT_0351 at 315.943 kb on + strand, within EX28DRAFT_0351 at 315.998 kb on - strand, within EX28DRAFT_0351 at 316.004 kb on - strand, within EX28DRAFT_0351 at 316.199 kb on - strand, within EX28DRAFT_0351 at 316.222 kb on + strand at 316.222 kb on + strand at 316.235 kb on - strand at 316.237 kb on - strand at 316.278 kb on + strand at 316.312 kb on + strand at 316.312 kb on + strand at 316.313 kb on - strand at 316.378 kb on - strand at 316.548 kb on - strand, within EX28DRAFT_0352 at 316.566 kb on - strand, within EX28DRAFT_0352 at 316.566 kb on - strand, within EX28DRAFT_0352 at 316.570 kb on + strand, within EX28DRAFT_0352 at 316.570 kb on + strand, within EX28DRAFT_0352 at 316.571 kb on - strand, within EX28DRAFT_0352 at 316.571 kb on - strand, within EX28DRAFT_0352 at 316.576 kb on + strand, within EX28DRAFT_0352 at 316.577 kb on - strand, within EX28DRAFT_0352
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 314,252 - EX28DRAFT_0350 0.27 +3.4 314,252 - EX28DRAFT_0350 0.27 +3.7 314,252 - EX28DRAFT_0350 0.27 +3.0 314,456 + EX28DRAFT_0350 0.42 +3.4 314,456 + EX28DRAFT_0350 0.42 +3.0 314,457 - EX28DRAFT_0350 0.42 +3.0 314,457 - EX28DRAFT_0350 0.42 +3.4 314,457 - EX28DRAFT_0350 0.42 +3.2 314,457 - EX28DRAFT_0350 0.42 +3.2 314,457 - EX28DRAFT_0350 0.42 +2.9 314,458 + EX28DRAFT_0350 0.42 +3.2 314,459 - EX28DRAFT_0350 0.42 +3.9 314,459 - EX28DRAFT_0350 0.42 +2.8 314,576 + EX28DRAFT_0350 0.51 +3.2 314,628 - EX28DRAFT_0350 0.55 +3.0 314,682 - EX28DRAFT_0350 0.59 +2.9 314,777 + EX28DRAFT_0350 0.66 +3.1 314,777 + EX28DRAFT_0350 0.66 +3.2 314,783 + EX28DRAFT_0350 0.66 +5.7 314,784 - EX28DRAFT_0350 0.66 +3.2 314,869 + EX28DRAFT_0350 0.73 +2.7 314,869 + EX28DRAFT_0350 0.73 +3.4 314,870 - EX28DRAFT_0350 0.73 +2.4 314,932 - EX28DRAFT_0350 0.77 +3.3 314,969 + EX28DRAFT_0350 0.80 +3.3 314,969 + EX28DRAFT_0350 0.80 +3.1 315,102 - EX28DRAFT_0350 0.90 +2.5 315,108 + +3.0 315,108 + +2.6 315,109 - +3.9 315,169 - +3.1 315,236 + +1.3 315,262 + +1.4 315,262 + +2.6 315,262 + +1.8 315,263 - -0.2 315,266 + +1.9 315,267 - +0.5 315,331 - +1.9 315,369 + EX28DRAFT_0351 0.11 +0.9 315,369 + EX28DRAFT_0351 0.11 +1.2 315,412 + EX28DRAFT_0351 0.15 +2.5 315,412 + EX28DRAFT_0351 0.15 +1.8 315,472 + EX28DRAFT_0351 0.21 +0.5 315,473 - EX28DRAFT_0351 0.21 -0.1 315,670 - EX28DRAFT_0351 0.40 +0.7 315,943 + EX28DRAFT_0351 0.65 +0.6 315,998 - EX28DRAFT_0351 0.71 +0.6 316,004 - EX28DRAFT_0351 0.71 +0.6 316,199 - EX28DRAFT_0351 0.90 +0.4 316,222 + -0.4 316,222 + -0.3 316,235 - +0.8 316,237 - +1.3 316,278 + +0.1 316,312 + +0.2 316,312 + +0.4 316,313 - +0.3 316,378 - +0.4 316,548 - EX28DRAFT_0352 0.53 +0.2 316,566 - EX28DRAFT_0352 0.60 -0.1 316,566 - EX28DRAFT_0352 0.60 -0.2 316,570 + EX28DRAFT_0352 0.61 -0.8 316,570 + EX28DRAFT_0352 0.61 -0.2 316,571 - EX28DRAFT_0352 0.62 +0.1 316,571 - EX28DRAFT_0352 0.62 -0.6 316,576 + EX28DRAFT_0352 0.64 -0.2 316,577 - EX28DRAFT_0352 0.64 -0.1
Or see this region's nucleotide sequence