Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0327 and EX28DRAFT_0328 overlap by 4 nucleotides EX28DRAFT_0328 and EX28DRAFT_0329 are separated by 13 nucleotides EX28DRAFT_0329 and EX28DRAFT_0330 are separated by 10 nucleotides
EX28DRAFT_0327: EX28DRAFT_0327 - NADH-quinone oxidoreductase, chain G, at 287,533 to 290,256
_0327
EX28DRAFT_0328: EX28DRAFT_0328 - NADH:ubiquinone oxidoreductase subunit 1 (chain H), at 290,253 to 291,230
_0328
EX28DRAFT_0329: EX28DRAFT_0329 - NADH-quinone oxidoreductase, chain I, at 291,244 to 291,786
_0329
EX28DRAFT_0330: EX28DRAFT_0330 - NADH:ubiquinone oxidoreductase subunit 6 (chain J), at 291,797 to 292,351
_0330
Position (kb) 290
291
292 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 289.442 kb on - strand, within EX28DRAFT_0327 at 289.444 kb on + strand, within EX28DRAFT_0327 at 289.877 kb on + strand, within EX28DRAFT_0327 at 290.044 kb on + strand at 290.045 kb on - strand at 290.110 kb on - strand at 290.110 kb on - strand at 290.110 kb on - strand at 290.190 kb on + strand at 290.843 kb on + strand, within EX28DRAFT_0328 at 291.142 kb on + strand at 291.237 kb on - strand at 291.238 kb on + strand at 291.251 kb on + strand at 291.285 kb on - strand at 291.358 kb on + strand, within EX28DRAFT_0329 at 291.358 kb on + strand, within EX28DRAFT_0329 at 291.359 kb on - strand, within EX28DRAFT_0329 at 291.465 kb on + strand, within EX28DRAFT_0329 at 291.465 kb on + strand, within EX28DRAFT_0329 at 291.616 kb on + strand, within EX28DRAFT_0329 at 291.616 kb on + strand, within EX28DRAFT_0329 at 291.617 kb on - strand, within EX28DRAFT_0329 at 291.638 kb on - strand, within EX28DRAFT_0329 at 291.685 kb on + strand, within EX28DRAFT_0329 at 291.754 kb on - strand at 291.812 kb on + strand at 291.812 kb on + strand at 291.888 kb on - strand, within EX28DRAFT_0330 at 291.891 kb on + strand, within EX28DRAFT_0330 at 292.186 kb on + strand, within EX28DRAFT_0330
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 289,442 - EX28DRAFT_0327 0.70 -4.6 289,444 + EX28DRAFT_0327 0.70 -3.7 289,877 + EX28DRAFT_0327 0.86 -1.7 290,044 + -2.1 290,045 - -1.4 290,110 - -4.0 290,110 - -0.4 290,110 - -2.9 290,190 + -1.6 290,843 + EX28DRAFT_0328 0.60 -2.4 291,142 + -1.6 291,237 - -2.0 291,238 + -2.6 291,251 + -2.6 291,285 - -0.4 291,358 + EX28DRAFT_0329 0.21 -2.1 291,358 + EX28DRAFT_0329 0.21 -2.0 291,359 - EX28DRAFT_0329 0.21 -1.7 291,465 + EX28DRAFT_0329 0.41 -2.7 291,465 + EX28DRAFT_0329 0.41 -0.1 291,616 + EX28DRAFT_0329 0.69 -1.6 291,616 + EX28DRAFT_0329 0.69 -3.6 291,617 - EX28DRAFT_0329 0.69 -2.2 291,638 - EX28DRAFT_0329 0.73 -2.0 291,685 + EX28DRAFT_0329 0.81 -1.9 291,754 - -2.5 291,812 + -4.0 291,812 + -1.3 291,888 - EX28DRAFT_0330 0.16 -3.5 291,891 + EX28DRAFT_0330 0.17 -2.4 292,186 + EX28DRAFT_0330 0.70 -2.5
Or see this region's nucleotide sequence