Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0325 and EX28DRAFT_0326 are separated by 6 nucleotides EX28DRAFT_0326 and EX28DRAFT_0327 are separated by 7 nucleotides EX28DRAFT_0327 and EX28DRAFT_0328 overlap by 4 nucleotides EX28DRAFT_0328 and EX28DRAFT_0329 are separated by 13 nucleotides
EX28DRAFT_0325: EX28DRAFT_0325 - NADH-quinone oxidoreductase, F subunit, at 286,140 to 287,477
_0325
EX28DRAFT_0326: EX28DRAFT_0326 - RNA, at 287,484 to 287,525
_0326
EX28DRAFT_0327: EX28DRAFT_0327 - NADH-quinone oxidoreductase, chain G, at 287,533 to 290,256
_0327
EX28DRAFT_0328: EX28DRAFT_0328 - NADH:ubiquinone oxidoreductase subunit 1 (chain H), at 290,253 to 291,230
_0328
EX28DRAFT_0329: EX28DRAFT_0329 - NADH-quinone oxidoreductase, chain I, at 291,244 to 291,786
_0329
Position (kb) 287
288
289
290
291 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 286.671 kb on + strand, within EX28DRAFT_0325 at 286.672 kb on - strand, within EX28DRAFT_0325 at 286.700 kb on + strand, within EX28DRAFT_0325 at 287.084 kb on + strand, within EX28DRAFT_0325 at 287.312 kb on - strand, within EX28DRAFT_0325 at 287.427 kb on - strand at 287.462 kb on + strand at 287.563 kb on + strand at 288.014 kb on - strand, within EX28DRAFT_0327 at 288.022 kb on + strand, within EX28DRAFT_0327 at 288.047 kb on + strand, within EX28DRAFT_0327 at 288.047 kb on + strand, within EX28DRAFT_0327 at 288.347 kb on - strand, within EX28DRAFT_0327 at 288.646 kb on + strand, within EX28DRAFT_0327 at 289.442 kb on - strand, within EX28DRAFT_0327 at 289.444 kb on + strand, within EX28DRAFT_0327 at 289.877 kb on + strand, within EX28DRAFT_0327 at 290.044 kb on + strand at 290.045 kb on - strand at 290.110 kb on - strand at 290.110 kb on - strand at 290.110 kb on - strand at 290.190 kb on + strand at 290.843 kb on + strand, within EX28DRAFT_0328 at 291.142 kb on + strand at 291.237 kb on - strand at 291.238 kb on + strand at 291.251 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 286,671 + EX28DRAFT_0325 0.40 -1.5 286,672 - EX28DRAFT_0325 0.40 -1.1 286,700 + EX28DRAFT_0325 0.42 -0.8 287,084 + EX28DRAFT_0325 0.71 -2.3 287,312 - EX28DRAFT_0325 0.88 -1.5 287,427 - -4.2 287,462 + +1.3 287,563 + -2.0 288,014 - EX28DRAFT_0327 0.18 -3.7 288,022 + EX28DRAFT_0327 0.18 -2.9 288,047 + EX28DRAFT_0327 0.19 -3.8 288,047 + EX28DRAFT_0327 0.19 -2.5 288,347 - EX28DRAFT_0327 0.30 -2.3 288,646 + EX28DRAFT_0327 0.41 -2.5 289,442 - EX28DRAFT_0327 0.70 -4.6 289,444 + EX28DRAFT_0327 0.70 -3.7 289,877 + EX28DRAFT_0327 0.86 -1.7 290,044 + -2.1 290,045 - -1.4 290,110 - -4.0 290,110 - -0.4 290,110 - -2.9 290,190 + -1.6 290,843 + EX28DRAFT_0328 0.60 -2.4 291,142 + -1.6 291,237 - -2.0 291,238 + -2.6 291,251 + -2.6
Or see this region's nucleotide sequence