Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0320 and EX28DRAFT_0321 are separated by 631 nucleotides EX28DRAFT_0321 and EX28DRAFT_0322 are separated by 15 nucleotides EX28DRAFT_0322 and EX28DRAFT_0323 are separated by 89 nucleotides
EX28DRAFT_0320: EX28DRAFT_0320 - Transcriptional regulator, at 281,048 to 281,986
_0320
EX28DRAFT_0321: EX28DRAFT_0321 - NADH:ubiquinone oxidoreductase subunit 3 (chain A), at 282,618 to 283,058
_0321
EX28DRAFT_0322: EX28DRAFT_0322 - NADH-quinone oxidoreductase, B subunit, at 283,074 to 283,748
_0322
EX28DRAFT_0323: EX28DRAFT_0323 - NADH (or F420H2) dehydrogenase, subunit C, at 283,838 to 285,640
_0323
Position (kb) 282
283
284 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 281.696 kb on + strand, within EX28DRAFT_0320 at 281.696 kb on + strand, within EX28DRAFT_0320 at 281.838 kb on - strand, within EX28DRAFT_0320 at 281.912 kb on - strand at 281.936 kb on - strand at 282.209 kb on + strand at 282.525 kb on - strand at 282.535 kb on + strand at 282.535 kb on + strand at 282.596 kb on + strand at 282.624 kb on - strand at 282.678 kb on - strand, within EX28DRAFT_0321 at 283.037 kb on + strand at 283.082 kb on + strand at 283.186 kb on - strand, within EX28DRAFT_0322 at 283.236 kb on - strand, within EX28DRAFT_0322 at 283.487 kb on + strand, within EX28DRAFT_0322 at 283.491 kb on + strand, within EX28DRAFT_0322 at 283.500 kb on + strand, within EX28DRAFT_0322 at 283.501 kb on - strand, within EX28DRAFT_0322 at 283.529 kb on + strand, within EX28DRAFT_0322 at 283.545 kb on + strand, within EX28DRAFT_0322 at 283.545 kb on + strand, within EX28DRAFT_0322 at 283.545 kb on + strand, within EX28DRAFT_0322 at 283.545 kb on + strand, within EX28DRAFT_0322 at 283.579 kb on - strand, within EX28DRAFT_0322 at 283.709 kb on + strand at 283.710 kb on - strand at 283.760 kb on - strand at 283.782 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 281,696 + EX28DRAFT_0320 0.69 -0.1 281,696 + EX28DRAFT_0320 0.69 -0.3 281,838 - EX28DRAFT_0320 0.84 +0.1 281,912 - -0.2 281,936 - -0.2 282,209 + +1.0 282,525 - -5.0 282,535 + -1.5 282,535 + -1.5 282,596 + -0.7 282,624 - -1.3 282,678 - EX28DRAFT_0321 0.14 -2.2 283,037 + -1.4 283,082 + -0.4 283,186 - EX28DRAFT_0322 0.17 -3.1 283,236 - EX28DRAFT_0322 0.24 -3.9 283,487 + EX28DRAFT_0322 0.61 -2.1 283,491 + EX28DRAFT_0322 0.62 -2.3 283,500 + EX28DRAFT_0322 0.63 -1.5 283,501 - EX28DRAFT_0322 0.63 -2.0 283,529 + EX28DRAFT_0322 0.67 -2.0 283,545 + EX28DRAFT_0322 0.70 -2.2 283,545 + EX28DRAFT_0322 0.70 -2.5 283,545 + EX28DRAFT_0322 0.70 -2.3 283,545 + EX28DRAFT_0322 0.70 -2.3 283,579 - EX28DRAFT_0322 0.75 -1.6 283,709 + -0.9 283,710 - -2.2 283,760 - -1.4 283,782 + -3.2
Or see this region's nucleotide sequence