Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0165 and EX28DRAFT_0166 are separated by 3 nucleotides EX28DRAFT_0166 and EX28DRAFT_0167 are separated by 207 nucleotides EX28DRAFT_0167 and EX28DRAFT_0168 overlap by 4 nucleotides
EX28DRAFT_0165: EX28DRAFT_0165 - exopolyphosphatase, at 112,247 to 113,785
_0165
EX28DRAFT_0166: EX28DRAFT_0166 - polyphosphate kinase 1, at 113,789 to 115,849
_0166
EX28DRAFT_0167: EX28DRAFT_0167 - phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent, at 116,057 to 116,698
_0167
EX28DRAFT_0168: EX28DRAFT_0168 - phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1), at 116,695 to 117,732
_0168
Position (kb)
113
114
115
116 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 112.809 kb on + strand, within EX28DRAFT_0165 at 112.926 kb on - strand, within EX28DRAFT_0165 at 113.030 kb on - strand, within EX28DRAFT_0165 at 113.259 kb on + strand, within EX28DRAFT_0165 at 113.589 kb on - strand, within EX28DRAFT_0165 at 113.770 kb on + strand at 113.786 kb on - strand at 113.823 kb on + strand at 113.898 kb on + strand at 113.899 kb on - strand at 113.899 kb on - strand at 113.899 kb on - strand at 114.036 kb on + strand, within EX28DRAFT_0166 at 114.036 kb on + strand, within EX28DRAFT_0166 at 114.037 kb on - strand, within EX28DRAFT_0166 at 114.037 kb on - strand, within EX28DRAFT_0166 at 114.046 kb on + strand, within EX28DRAFT_0166 at 114.067 kb on + strand, within EX28DRAFT_0166 at 114.068 kb on - strand, within EX28DRAFT_0166 at 114.208 kb on - strand, within EX28DRAFT_0166 at 114.208 kb on - strand, within EX28DRAFT_0166 at 114.313 kb on - strand, within EX28DRAFT_0166 at 114.453 kb on + strand, within EX28DRAFT_0166 at 114.454 kb on - strand, within EX28DRAFT_0166 at 114.735 kb on + strand, within EX28DRAFT_0166 at 114.825 kb on + strand, within EX28DRAFT_0166 at 114.825 kb on + strand, within EX28DRAFT_0166 at 114.825 kb on + strand, within EX28DRAFT_0166 at 114.825 kb on + strand, within EX28DRAFT_0166 at 114.826 kb on - strand, within EX28DRAFT_0166 at 114.826 kb on - strand, within EX28DRAFT_0166 at 114.949 kb on + strand, within EX28DRAFT_0166 at 115.015 kb on + strand, within EX28DRAFT_0166 at 115.153 kb on - strand, within EX28DRAFT_0166 at 115.249 kb on + strand, within EX28DRAFT_0166 at 115.389 kb on + strand, within EX28DRAFT_0166 at 115.389 kb on + strand, within EX28DRAFT_0166 at 115.390 kb on - strand, within EX28DRAFT_0166 at 115.444 kb on + strand, within EX28DRAFT_0166 at 115.462 kb on - strand, within EX28DRAFT_0166 at 115.462 kb on - strand, within EX28DRAFT_0166 at 115.567 kb on - strand, within EX28DRAFT_0166 at 115.644 kb on - strand at 115.701 kb on + strand at 115.702 kb on - strand at 115.726 kb on - strand at 115.787 kb on + strand at 115.788 kb on - strand at 115.798 kb on + strand at 115.814 kb on + strand at 115.814 kb on + strand at 115.828 kb on + strand at 115.830 kb on + strand at 115.831 kb on - strand at 115.885 kb on + strand at 115.886 kb on - strand at 115.886 kb on - strand at 115.903 kb on - strand at 115.925 kb on + strand at 115.925 kb on + strand at 115.926 kb on - strand at 115.926 kb on - strand at 116.015 kb on + strand at 116.015 kb on + strand at 116.015 kb on + strand at 116.015 kb on + strand at 116.015 kb on + strand at 116.016 kb on - strand at 116.051 kb on - strand at 116.051 kb on - strand at 116.058 kb on + strand at 116.433 kb on + strand, within EX28DRAFT_0167
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 112,809 + EX28DRAFT_0165 0.37 -0.4 112,926 - EX28DRAFT_0165 0.44 -0.3 113,030 - EX28DRAFT_0165 0.51 -0.4 113,259 + EX28DRAFT_0165 0.66 -0.3 113,589 - EX28DRAFT_0165 0.87 +0.4 113,770 + +0.1 113,786 - -0.1 113,823 + -1.7 113,898 + -1.6 113,899 - -2.9 113,899 - -2.3 113,899 - -4.1 114,036 + EX28DRAFT_0166 0.12 +1.0 114,036 + EX28DRAFT_0166 0.12 -1.2 114,037 - EX28DRAFT_0166 0.12 -2.2 114,037 - EX28DRAFT_0166 0.12 -2.1 114,046 + EX28DRAFT_0166 0.12 -3.5 114,067 + EX28DRAFT_0166 0.13 -4.8 114,068 - EX28DRAFT_0166 0.14 -2.2 114,208 - EX28DRAFT_0166 0.20 -1.6 114,208 - EX28DRAFT_0166 0.20 -1.5 114,313 - EX28DRAFT_0166 0.25 -2.1 114,453 + EX28DRAFT_0166 0.32 -0.6 114,454 - EX28DRAFT_0166 0.32 -1.4 114,735 + EX28DRAFT_0166 0.46 -3.1 114,825 + EX28DRAFT_0166 0.50 -2.5 114,825 + EX28DRAFT_0166 0.50 -1.4 114,825 + EX28DRAFT_0166 0.50 -1.2 114,825 + EX28DRAFT_0166 0.50 -0.4 114,826 - EX28DRAFT_0166 0.50 +2.0 114,826 - EX28DRAFT_0166 0.50 -2.6 114,949 + EX28DRAFT_0166 0.56 -1.2 115,015 + EX28DRAFT_0166 0.59 -3.9 115,153 - EX28DRAFT_0166 0.66 -2.2 115,249 + EX28DRAFT_0166 0.71 -2.8 115,389 + EX28DRAFT_0166 0.78 -2.8 115,389 + EX28DRAFT_0166 0.78 +1.6 115,390 - EX28DRAFT_0166 0.78 -3.4 115,444 + EX28DRAFT_0166 0.80 -1.0 115,462 - EX28DRAFT_0166 0.81 -4.0 115,462 - EX28DRAFT_0166 0.81 -0.0 115,567 - EX28DRAFT_0166 0.86 -0.9 115,644 - -3.1 115,701 + -3.7 115,702 - -1.5 115,726 - -2.8 115,787 + -1.6 115,788 - -2.5 115,798 + -2.0 115,814 + -0.0 115,814 + -2.5 115,828 + -1.2 115,830 + -1.2 115,831 - -2.1 115,885 + -1.4 115,886 - -2.6 115,886 - -0.4 115,903 - -1.2 115,925 + -2.4 115,925 + +0.0 115,926 - -1.0 115,926 - +0.6 116,015 + +0.8 116,015 + +0.4 116,015 + +0.4 116,015 + -0.7 116,015 + -0.1 116,016 - +1.1 116,051 - +0.3 116,051 - +0.6 116,058 + -0.2 116,433 + EX28DRAFT_0167 0.59 -1.0
Or see this region's nucleotide sequence