Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_0058
Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MS_media with arsenate 5 mM |
|---|---|---|---|---|---|
| remove | |||||
| 101 | + | EX28DRAFT_0058 | 0.81 | +0.4 | |
| 124 | + | +0.5 | |||
| 124 | + | +0.3 | |||
| 319 | + | +0.2 | |||
| 535 | + | +0.5 | |||
| 632 | + | +0.4 | |||
| 632 | + | +0.1 | |||
| 633 | - | +0.0 | |||
| 657 | - | EX28DRAFT_0060 | 0.10 | -0.5 | |
| 657 | - | EX28DRAFT_0060 | 0.10 | -0.3 | |
| 705 | + | EX28DRAFT_0060 | 0.14 | -1.3 | |
| 802 | + | EX28DRAFT_0060 | 0.22 | -1.6 | |
| 803 | - | EX28DRAFT_0060 | 0.22 | -0.2 | |
| 803 | - | EX28DRAFT_0060 | 0.22 | +0.1 | |
| 878 | - | EX28DRAFT_0060 | 0.28 | +0.2 | |
| 895 | - | EX28DRAFT_0060 | 0.29 | -0.9 | |
| 897 | + | EX28DRAFT_0060 | 0.29 | +0.6 | |
| 897 | + | EX28DRAFT_0060 | 0.29 | +0.5 | |
| 897 | + | EX28DRAFT_0060 | 0.29 | +0.3 | |
| 901 | - | EX28DRAFT_0060 | 0.29 | +0.4 | |
| 913 | - | EX28DRAFT_0060 | 0.30 | -1.1 | |
| 959 | + | EX28DRAFT_0060 | 0.34 | +0.3 | |
| 959 | + | EX28DRAFT_0060 | 0.34 | -0.0 | |
| 988 | + | EX28DRAFT_0060 | 0.36 | -0.1 | |
| 1,014 | - | EX28DRAFT_0060 | 0.38 | +0.5 | |
| 1,014 | - | EX28DRAFT_0060 | 0.38 | +0.1 |
Or see this region's nucleotide sequence