Experiment: m.b. Chlorite 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_19830 and CA264_19835 are separated by 2 nucleotides CA264_19835 and CA264_19840 are separated by 18 nucleotides CA264_19840 and CA264_19845 are separated by 55 nucleotides
CA264_19830: CA264_19830 - hypothetical protein, at 4,575,837 to 4,577,285
_19830
CA264_19835: CA264_19835 - chorismate synthase, at 4,577,288 to 4,578,367
_19835
CA264_19840: CA264_19840 - hypothetical protein, at 4,578,386 to 4,578,619
_19840
CA264_19845: CA264_19845 - hypothetical protein, at 4,578,675 to 4,579,271
_19845
Position (kb)
4577
4578
4579 Strain fitness (log2 ratio)
-1
0
1
2 at 4576.303 kb on + strand, within CA264_19830 at 4576.304 kb on - strand, within CA264_19830 at 4576.392 kb on + strand, within CA264_19830 at 4576.393 kb on - strand, within CA264_19830 at 4576.567 kb on - strand, within CA264_19830 at 4576.567 kb on - strand, within CA264_19830 at 4576.639 kb on - strand, within CA264_19830 at 4576.639 kb on - strand, within CA264_19830 at 4576.641 kb on - strand, within CA264_19830 at 4576.701 kb on + strand, within CA264_19830 at 4576.829 kb on + strand, within CA264_19830 at 4576.829 kb on + strand, within CA264_19830 at 4576.829 kb on + strand, within CA264_19830 at 4576.830 kb on - strand, within CA264_19830 at 4576.830 kb on - strand, within CA264_19830 at 4576.833 kb on + strand, within CA264_19830 at 4577.043 kb on + strand, within CA264_19830 at 4577.043 kb on + strand, within CA264_19830 at 4577.048 kb on + strand, within CA264_19830 at 4577.067 kb on + strand, within CA264_19830 at 4577.158 kb on - strand at 4577.158 kb on - strand at 4577.284 kb on - strand at 4577.287 kb on + strand at 4578.354 kb on + strand at 4578.355 kb on - strand at 4578.365 kb on + strand at 4578.366 kb on - strand at 4578.391 kb on + strand at 4578.392 kb on - strand at 4578.392 kb on - strand at 4578.439 kb on - strand, within CA264_19840 at 4578.542 kb on - strand, within CA264_19840 at 4578.601 kb on + strand at 4578.657 kb on + strand at 4578.658 kb on - strand at 4578.677 kb on - strand at 4578.677 kb on - strand at 4578.707 kb on + strand at 4578.707 kb on + strand at 4578.812 kb on - strand, within CA264_19845 at 4578.842 kb on + strand, within CA264_19845 at 4578.842 kb on + strand, within CA264_19845 at 4578.843 kb on - strand, within CA264_19845 at 4578.873 kb on - strand, within CA264_19845 at 4578.878 kb on + strand, within CA264_19845 at 4578.879 kb on - strand, within CA264_19845 at 4578.915 kb on + strand, within CA264_19845 at 4578.915 kb on + strand, within CA264_19845 at 4578.915 kb on + strand, within CA264_19845 at 4578.916 kb on - strand, within CA264_19845 at 4578.916 kb on - strand, within CA264_19845 at 4578.965 kb on + strand, within CA264_19845 at 4578.966 kb on - strand, within CA264_19845 at 4578.970 kb on + strand, within CA264_19845 at 4578.970 kb on + strand, within CA264_19845 at 4578.971 kb on - strand, within CA264_19845 at 4578.984 kb on + strand, within CA264_19845 at 4578.985 kb on - strand, within CA264_19845 at 4578.985 kb on - strand, within CA264_19845 at 4578.985 kb on - strand, within CA264_19845 at 4578.985 kb on - strand, within CA264_19845 at 4578.985 kb on - strand, within CA264_19845 at 4578.985 kb on - strand, within CA264_19845 at 4578.985 kb on - strand, within CA264_19845 at 4578.985 kb on - strand, within CA264_19845 at 4578.985 kb on - strand, within CA264_19845 at 4578.985 kb on - strand, within CA264_19845 at 4578.985 kb on - strand, within CA264_19845 at 4578.986 kb on + strand, within CA264_19845 at 4579.006 kb on + strand, within CA264_19845 at 4579.007 kb on - strand, within CA264_19845 at 4579.023 kb on + strand, within CA264_19845 at 4579.024 kb on - strand, within CA264_19845 at 4579.024 kb on - strand, within CA264_19845 at 4579.024 kb on - strand, within CA264_19845 at 4579.113 kb on + strand, within CA264_19845 at 4579.113 kb on + strand, within CA264_19845 at 4579.117 kb on + strand, within CA264_19845 at 4579.117 kb on + strand, within CA264_19845 at 4579.117 kb on + strand, within CA264_19845 at 4579.118 kb on - strand, within CA264_19845 at 4579.118 kb on - strand, within CA264_19845 at 4579.118 kb on - strand, within CA264_19845 at 4579.118 kb on - strand, within CA264_19845 at 4579.208 kb on + strand, within CA264_19845 at 4579.208 kb on + strand, within CA264_19845 at 4579.208 kb on + strand, within CA264_19845 at 4579.209 kb on - strand, within CA264_19845 at 4579.283 kb on - strand at 4579.302 kb on - strand at 4579.304 kb on - strand at 4579.306 kb on - strand at 4579.306 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM remove 4,576,303 + CA264_19830 0.32 +0.7 4,576,304 - CA264_19830 0.32 +0.3 4,576,392 + CA264_19830 0.38 +0.2 4,576,393 - CA264_19830 0.38 +0.0 4,576,567 - CA264_19830 0.50 -0.8 4,576,567 - CA264_19830 0.50 -0.4 4,576,639 - CA264_19830 0.55 +0.6 4,576,639 - CA264_19830 0.55 +0.9 4,576,641 - CA264_19830 0.55 +0.5 4,576,701 + CA264_19830 0.60 -0.0 4,576,829 + CA264_19830 0.68 -1.0 4,576,829 + CA264_19830 0.68 +0.5 4,576,829 + CA264_19830 0.68 -0.2 4,576,830 - CA264_19830 0.69 +0.6 4,576,830 - CA264_19830 0.69 +1.2 4,576,833 + CA264_19830 0.69 -1.6 4,577,043 + CA264_19830 0.83 +0.3 4,577,043 + CA264_19830 0.83 -0.5 4,577,048 + CA264_19830 0.84 -0.8 4,577,067 + CA264_19830 0.85 -0.1 4,577,158 - -0.0 4,577,158 - -1.1 4,577,284 - +0.8 4,577,287 + +0.4 4,578,354 + +0.0 4,578,355 - +0.6 4,578,365 + +0.8 4,578,366 - +1.1 4,578,391 + -0.9 4,578,392 - -0.0 4,578,392 - +0.1 4,578,439 - CA264_19840 0.23 -0.1 4,578,542 - CA264_19840 0.67 +0.2 4,578,601 + +0.2 4,578,657 + +0.2 4,578,658 - +0.4 4,578,677 - +0.8 4,578,677 - -0.3 4,578,707 + +2.4 4,578,707 + +0.2 4,578,812 - CA264_19845 0.23 +0.9 4,578,842 + CA264_19845 0.28 +0.3 4,578,842 + CA264_19845 0.28 -0.5 4,578,843 - CA264_19845 0.28 -0.7 4,578,873 - CA264_19845 0.33 +0.9 4,578,878 + CA264_19845 0.34 +0.5 4,578,879 - CA264_19845 0.34 +0.1 4,578,915 + CA264_19845 0.40 +0.2 4,578,915 + CA264_19845 0.40 -0.4 4,578,915 + CA264_19845 0.40 -0.4 4,578,916 - CA264_19845 0.40 -1.6 4,578,916 - CA264_19845 0.40 +1.3 4,578,965 + CA264_19845 0.49 -0.2 4,578,966 - CA264_19845 0.49 -0.9 4,578,970 + CA264_19845 0.49 +0.1 4,578,970 + CA264_19845 0.49 -0.2 4,578,971 - CA264_19845 0.50 +0.3 4,578,984 + CA264_19845 0.52 -0.2 4,578,985 - CA264_19845 0.52 +0.1 4,578,985 - CA264_19845 0.52 -0.1 4,578,985 - CA264_19845 0.52 -0.4 4,578,985 - CA264_19845 0.52 +0.1 4,578,985 - CA264_19845 0.52 +1.1 4,578,985 - CA264_19845 0.52 +0.4 4,578,985 - CA264_19845 0.52 +0.7 4,578,985 - CA264_19845 0.52 +1.1 4,578,985 - CA264_19845 0.52 -0.3 4,578,985 - CA264_19845 0.52 -0.2 4,578,985 - CA264_19845 0.52 +0.3 4,578,986 + CA264_19845 0.52 -1.1 4,579,006 + CA264_19845 0.55 +1.1 4,579,007 - CA264_19845 0.56 +0.4 4,579,023 + CA264_19845 0.58 +0.6 4,579,024 - CA264_19845 0.58 +0.3 4,579,024 - CA264_19845 0.58 -0.6 4,579,024 - CA264_19845 0.58 +0.8 4,579,113 + CA264_19845 0.73 -0.1 4,579,113 + CA264_19845 0.73 +1.3 4,579,117 + CA264_19845 0.74 +0.9 4,579,117 + CA264_19845 0.74 -1.2 4,579,117 + CA264_19845 0.74 +1.2 4,579,118 - CA264_19845 0.74 -0.0 4,579,118 - CA264_19845 0.74 -0.3 4,579,118 - CA264_19845 0.74 -0.7 4,579,118 - CA264_19845 0.74 -0.3 4,579,208 + CA264_19845 0.89 -1.2 4,579,208 + CA264_19845 0.89 -0.2 4,579,208 + CA264_19845 0.89 +0.1 4,579,209 - CA264_19845 0.89 +0.6 4,579,283 - +1.4 4,579,302 - +0.3 4,579,304 - -0.2 4,579,306 - -0.6 4,579,306 - +0.1
Or see this region's nucleotide sequence