Experiment: m.b. Chlorite 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_19825 and CA264_19830 are separated by 531 nucleotides CA264_19830 and CA264_19835 are separated by 2 nucleotides
CA264_19825: CA264_19825 - Tat (twin-arginine translocation) pathway signal sequence containing protein, at 4,574,637 to 4,575,305
_19825
CA264_19830: CA264_19830 - hypothetical protein, at 4,575,837 to 4,577,285
_19830
CA264_19835: CA264_19835 - chorismate synthase, at 4,577,288 to 4,578,367
_19835
Position (kb)
4575
4576
4577
4578 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4574.840 kb on - strand, within CA264_19825 at 4574.955 kb on + strand, within CA264_19825 at 4574.955 kb on + strand, within CA264_19825 at 4574.955 kb on + strand, within CA264_19825 at 4575.031 kb on - strand, within CA264_19825 at 4575.031 kb on - strand, within CA264_19825 at 4575.110 kb on + strand, within CA264_19825 at 4575.142 kb on + strand, within CA264_19825 at 4575.148 kb on + strand, within CA264_19825 at 4575.149 kb on - strand, within CA264_19825 at 4575.250 kb on - strand at 4575.354 kb on - strand at 4575.390 kb on + strand at 4575.390 kb on + strand at 4575.468 kb on - strand at 4575.557 kb on + strand at 4575.557 kb on + strand at 4575.557 kb on + strand at 4575.557 kb on + strand at 4575.560 kb on - strand at 4575.561 kb on + strand at 4575.561 kb on + strand at 4575.562 kb on - strand at 4575.567 kb on + strand at 4575.570 kb on - strand at 4575.570 kb on - strand at 4575.600 kb on - strand at 4575.605 kb on - strand at 4575.612 kb on - strand at 4575.797 kb on + strand at 4575.878 kb on - strand at 4575.990 kb on + strand, within CA264_19830 at 4575.990 kb on + strand, within CA264_19830 at 4575.991 kb on - strand, within CA264_19830 at 4575.991 kb on - strand, within CA264_19830 at 4576.036 kb on - strand, within CA264_19830 at 4576.125 kb on + strand, within CA264_19830 at 4576.128 kb on - strand, within CA264_19830 at 4576.189 kb on + strand, within CA264_19830 at 4576.189 kb on + strand, within CA264_19830 at 4576.189 kb on + strand, within CA264_19830 at 4576.189 kb on + strand, within CA264_19830 at 4576.229 kb on + strand, within CA264_19830 at 4576.303 kb on + strand, within CA264_19830 at 4576.304 kb on - strand, within CA264_19830 at 4576.392 kb on + strand, within CA264_19830 at 4576.393 kb on - strand, within CA264_19830 at 4576.567 kb on - strand, within CA264_19830 at 4576.567 kb on - strand, within CA264_19830 at 4576.639 kb on - strand, within CA264_19830 at 4576.639 kb on - strand, within CA264_19830 at 4576.641 kb on - strand, within CA264_19830 at 4576.701 kb on + strand, within CA264_19830 at 4576.829 kb on + strand, within CA264_19830 at 4576.829 kb on + strand, within CA264_19830 at 4576.829 kb on + strand, within CA264_19830 at 4576.830 kb on - strand, within CA264_19830 at 4576.830 kb on - strand, within CA264_19830 at 4576.833 kb on + strand, within CA264_19830 at 4577.043 kb on + strand, within CA264_19830 at 4577.043 kb on + strand, within CA264_19830 at 4577.048 kb on + strand, within CA264_19830 at 4577.067 kb on + strand, within CA264_19830 at 4577.158 kb on - strand at 4577.158 kb on - strand at 4577.284 kb on - strand at 4577.287 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM remove 4,574,840 - CA264_19825 0.30 +1.3 4,574,955 + CA264_19825 0.48 +1.1 4,574,955 + CA264_19825 0.48 +1.4 4,574,955 + CA264_19825 0.48 +0.7 4,575,031 - CA264_19825 0.59 +1.0 4,575,031 - CA264_19825 0.59 +0.9 4,575,110 + CA264_19825 0.71 +0.5 4,575,142 + CA264_19825 0.75 +0.7 4,575,148 + CA264_19825 0.76 +1.2 4,575,149 - CA264_19825 0.77 +1.8 4,575,250 - +1.2 4,575,354 - +1.2 4,575,390 + +1.0 4,575,390 + +0.8 4,575,468 - +0.4 4,575,557 + +0.1 4,575,557 + +1.3 4,575,557 + -0.6 4,575,557 + +0.2 4,575,560 - +0.4 4,575,561 + -0.9 4,575,561 + -0.8 4,575,562 - +0.2 4,575,567 + +0.1 4,575,570 - -1.5 4,575,570 - -0.8 4,575,600 - -0.2 4,575,605 - +1.0 4,575,612 - -0.5 4,575,797 + -0.0 4,575,878 - +0.8 4,575,990 + CA264_19830 0.11 -1.2 4,575,990 + CA264_19830 0.11 +1.0 4,575,991 - CA264_19830 0.11 +0.6 4,575,991 - CA264_19830 0.11 -0.0 4,576,036 - CA264_19830 0.14 -0.8 4,576,125 + CA264_19830 0.20 -0.5 4,576,128 - CA264_19830 0.20 -0.1 4,576,189 + CA264_19830 0.24 -0.1 4,576,189 + CA264_19830 0.24 -0.2 4,576,189 + CA264_19830 0.24 -0.5 4,576,189 + CA264_19830 0.24 -1.9 4,576,229 + CA264_19830 0.27 +0.7 4,576,303 + CA264_19830 0.32 +0.7 4,576,304 - CA264_19830 0.32 +0.3 4,576,392 + CA264_19830 0.38 +0.2 4,576,393 - CA264_19830 0.38 +0.0 4,576,567 - CA264_19830 0.50 -0.8 4,576,567 - CA264_19830 0.50 -0.4 4,576,639 - CA264_19830 0.55 +0.6 4,576,639 - CA264_19830 0.55 +0.9 4,576,641 - CA264_19830 0.55 +0.5 4,576,701 + CA264_19830 0.60 -0.0 4,576,829 + CA264_19830 0.68 -1.0 4,576,829 + CA264_19830 0.68 +0.5 4,576,829 + CA264_19830 0.68 -0.2 4,576,830 - CA264_19830 0.69 +0.6 4,576,830 - CA264_19830 0.69 +1.2 4,576,833 + CA264_19830 0.69 -1.6 4,577,043 + CA264_19830 0.83 +0.3 4,577,043 + CA264_19830 0.83 -0.5 4,577,048 + CA264_19830 0.84 -0.8 4,577,067 + CA264_19830 0.85 -0.1 4,577,158 - -0.0 4,577,158 - -1.1 4,577,284 - +0.8 4,577,287 + +0.4
Or see this region's nucleotide sequence