Experiment: m.b. Chlorite 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_19550 and CA264_19555 are separated by 70 nucleotides CA264_19555 and CA264_19560 are separated by 412 nucleotides CA264_19560 and CA264_19565 are separated by 116 nucleotides CA264_19565 and CA264_19570 overlap by 17 nucleotides
CA264_19550: CA264_19550 - diaminopimelate epimerase, at 4,516,230 to 4,517,015
_19550
CA264_19555: CA264_19555 - GNAT family N-acetyltransferase, at 4,517,086 to 4,517,601
_19555
CA264_19560: CA264_19560 - preprotein translocase subunit SecA, at 4,518,014 to 4,521,385
_19560
CA264_19565: CA264_19565 - 2-deoxyribose-5-phosphate aldolase, at 4,521,502 to 4,522,173
_19565
CA264_19570: CA264_19570 - sporulation protein, at 4,522,157 to 4,522,675
_19570
Position (kb)
4518
4519
4520
4521
4522 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 4517.014 kb on - strand at 4517.107 kb on - strand at 4517.110 kb on + strand at 4517.111 kb on - strand at 4517.111 kb on - strand at 4517.250 kb on + strand, within CA264_19555 at 4517.251 kb on - strand, within CA264_19555 at 4517.254 kb on + strand, within CA264_19555 at 4517.255 kb on - strand, within CA264_19555 at 4517.255 kb on - strand, within CA264_19555 at 4517.305 kb on - strand, within CA264_19555 at 4517.305 kb on - strand, within CA264_19555 at 4517.367 kb on - strand, within CA264_19555 at 4517.439 kb on + strand, within CA264_19555 at 4517.439 kb on + strand, within CA264_19555 at 4517.439 kb on + strand, within CA264_19555 at 4517.439 kb on + strand, within CA264_19555 at 4517.440 kb on - strand, within CA264_19555 at 4517.440 kb on - strand, within CA264_19555 at 4517.460 kb on - strand, within CA264_19555 at 4517.461 kb on + strand, within CA264_19555 at 4517.461 kb on + strand, within CA264_19555 at 4517.462 kb on - strand, within CA264_19555 at 4517.580 kb on - strand at 4517.580 kb on - strand at 4517.612 kb on + strand at 4517.613 kb on - strand at 4517.677 kb on - strand at 4517.677 kb on - strand at 4517.691 kb on - strand at 4517.699 kb on - strand at 4517.699 kb on - strand at 4517.730 kb on - strand at 4517.730 kb on - strand at 4517.774 kb on + strand at 4517.817 kb on - strand at 4517.817 kb on - strand at 4517.820 kb on + strand at 4517.820 kb on + strand at 4517.821 kb on - strand at 4517.824 kb on - strand at 4517.831 kb on - strand at 4517.835 kb on + strand at 4517.854 kb on - strand at 4517.857 kb on + strand at 4517.864 kb on + strand at 4517.865 kb on - strand at 4517.866 kb on + strand at 4517.867 kb on - strand at 4517.869 kb on + strand at 4517.869 kb on + strand at 4517.869 kb on + strand at 4517.870 kb on - strand at 4517.871 kb on + strand at 4517.883 kb on - strand at 4517.928 kb on - strand at 4517.930 kb on + strand at 4517.940 kb on + strand at 4517.944 kb on + strand at 4517.945 kb on - strand at 4517.947 kb on - strand at 4517.996 kb on + strand at 4518.007 kb on + strand at 4518.007 kb on + strand at 4518.010 kb on - strand at 4518.010 kb on - strand at 4518.010 kb on - strand at 4518.010 kb on - strand at 4521.156 kb on + strand at 4521.208 kb on + strand at 4521.296 kb on + strand at 4521.383 kb on + strand at 4521.402 kb on + strand at 4521.496 kb on - strand at 4521.497 kb on + strand at 4521.497 kb on + strand at 4521.526 kb on + strand at 4521.526 kb on + strand at 4521.526 kb on + strand at 4521.526 kb on + strand at 4521.526 kb on + strand at 4521.527 kb on - strand at 4521.528 kb on + strand at 4521.529 kb on - strand at 4521.530 kb on + strand at 4521.530 kb on + strand at 4521.530 kb on + strand at 4521.601 kb on + strand, within CA264_19565 at 4521.632 kb on - strand, within CA264_19565 at 4521.678 kb on - strand, within CA264_19565 at 4521.713 kb on - strand, within CA264_19565 at 4521.730 kb on + strand, within CA264_19565 at 4521.818 kb on - strand, within CA264_19565 at 4521.818 kb on - strand, within CA264_19565 at 4521.828 kb on - strand, within CA264_19565 at 4521.964 kb on + strand, within CA264_19565 at 4521.978 kb on + strand, within CA264_19565 at 4521.978 kb on + strand, within CA264_19565 at 4522.056 kb on - strand, within CA264_19565 at 4522.124 kb on + strand at 4522.141 kb on - strand at 4522.142 kb on + strand at 4522.143 kb on - strand at 4522.143 kb on - strand at 4522.149 kb on - strand at 4522.149 kb on - strand at 4522.149 kb on - strand at 4522.152 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM remove 4,517,014 - -2.8 4,517,107 - -2.1 4,517,110 + -0.8 4,517,111 - -3.4 4,517,111 - -3.2 4,517,250 + CA264_19555 0.32 -0.5 4,517,251 - CA264_19555 0.32 -3.2 4,517,254 + CA264_19555 0.33 -2.0 4,517,255 - CA264_19555 0.33 -3.2 4,517,255 - CA264_19555 0.33 -3.2 4,517,305 - CA264_19555 0.42 -1.7 4,517,305 - CA264_19555 0.42 -3.3 4,517,367 - CA264_19555 0.54 -0.4 4,517,439 + CA264_19555 0.68 +0.2 4,517,439 + CA264_19555 0.68 -1.4 4,517,439 + CA264_19555 0.68 -1.4 4,517,439 + CA264_19555 0.68 -0.3 4,517,440 - CA264_19555 0.69 -1.0 4,517,440 - CA264_19555 0.69 -2.8 4,517,460 - CA264_19555 0.72 -2.7 4,517,461 + CA264_19555 0.73 -0.7 4,517,461 + CA264_19555 0.73 -1.6 4,517,462 - CA264_19555 0.73 -2.9 4,517,580 - -3.0 4,517,580 - -2.4 4,517,612 + -1.6 4,517,613 - -3.2 4,517,677 - -1.9 4,517,677 - -1.2 4,517,691 - -2.5 4,517,699 - -4.5 4,517,699 - -3.3 4,517,730 - -3.5 4,517,730 - -1.6 4,517,774 + -1.0 4,517,817 - -4.8 4,517,817 - -2.0 4,517,820 + -1.4 4,517,820 + +1.0 4,517,821 - -0.8 4,517,824 - -0.4 4,517,831 - -3.0 4,517,835 + +0.1 4,517,854 - -2.0 4,517,857 + -0.2 4,517,864 + +0.0 4,517,865 - +0.3 4,517,866 + +0.1 4,517,867 - -3.2 4,517,869 + -1.8 4,517,869 + -2.2 4,517,869 + -0.8 4,517,870 - -2.4 4,517,871 + -3.0 4,517,883 - -2.9 4,517,928 - -2.2 4,517,930 + -0.4 4,517,940 + -0.7 4,517,944 + +0.8 4,517,945 - -1.0 4,517,947 - -3.1 4,517,996 + -0.4 4,518,007 + -1.4 4,518,007 + -2.4 4,518,010 - -1.7 4,518,010 - -2.3 4,518,010 - -2.1 4,518,010 - -3.3 4,521,156 + -0.7 4,521,208 + -2.0 4,521,296 + +0.0 4,521,383 + -0.4 4,521,402 + -0.4 4,521,496 - -2.7 4,521,497 + -0.9 4,521,497 + -0.4 4,521,526 + -0.6 4,521,526 + -0.5 4,521,526 + -0.4 4,521,526 + -0.7 4,521,526 + -0.1 4,521,527 - -1.2 4,521,528 + -0.1 4,521,529 - -0.5 4,521,530 + +0.7 4,521,530 + -1.0 4,521,530 + +0.3 4,521,601 + CA264_19565 0.15 -1.3 4,521,632 - CA264_19565 0.19 -0.5 4,521,678 - CA264_19565 0.26 -0.5 4,521,713 - CA264_19565 0.31 +0.4 4,521,730 + CA264_19565 0.34 +0.8 4,521,818 - CA264_19565 0.47 -0.0 4,521,818 - CA264_19565 0.47 -0.1 4,521,828 - CA264_19565 0.49 +0.8 4,521,964 + CA264_19565 0.69 +0.1 4,521,978 + CA264_19565 0.71 -0.3 4,521,978 + CA264_19565 0.71 -2.4 4,522,056 - CA264_19565 0.82 -0.1 4,522,124 + +1.1 4,522,141 - -0.2 4,522,142 + -1.2 4,522,143 - -1.4 4,522,143 - -0.3 4,522,149 - +0.5 4,522,149 - +0.0 4,522,149 - -0.1 4,522,152 + -0.7
Or see this region's nucleotide sequence