Experiment: m.b. Chlorite 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18865 and CA264_18870 are separated by 109 nucleotides CA264_18870 and CA264_18875 are separated by 127 nucleotides CA264_18875 and CA264_18880 are separated by 37 nucleotides
CA264_18865: CA264_18865 - monooxygenase, at 4,378,657 to 4,379,799
_18865
CA264_18870: CA264_18870 - hypothetical protein, at 4,379,909 to 4,380,424
_18870
CA264_18875: CA264_18875 - N-acetyltransferase, at 4,380,552 to 4,381,082
_18875
CA264_18880: CA264_18880 - hypothetical protein, at 4,381,120 to 4,381,404
_18880
Position (kb)
4379
4380
4381 Strain fitness (log2 ratio)
-2
-1
0
1 at 4378.934 kb on - strand, within CA264_18865 at 4378.934 kb on - strand, within CA264_18865 at 4378.979 kb on + strand, within CA264_18865 at 4379.016 kb on - strand, within CA264_18865 at 4379.016 kb on - strand, within CA264_18865 at 4379.026 kb on - strand, within CA264_18865 at 4379.122 kb on - strand, within CA264_18865 at 4379.133 kb on - strand, within CA264_18865 at 4379.213 kb on + strand, within CA264_18865 at 4379.214 kb on - strand, within CA264_18865 at 4379.214 kb on - strand, within CA264_18865 at 4379.219 kb on + strand, within CA264_18865 at 4379.220 kb on - strand, within CA264_18865 at 4379.456 kb on + strand, within CA264_18865 at 4379.456 kb on + strand, within CA264_18865 at 4379.526 kb on + strand, within CA264_18865 at 4379.527 kb on - strand, within CA264_18865 at 4379.623 kb on + strand, within CA264_18865 at 4379.623 kb on + strand, within CA264_18865 at 4379.809 kb on - strand at 4379.809 kb on - strand at 4379.819 kb on + strand at 4379.819 kb on + strand at 4379.838 kb on - strand at 4379.854 kb on + strand at 4379.860 kb on + strand at 4379.873 kb on + strand at 4379.893 kb on + strand at 4379.920 kb on + strand at 4379.921 kb on - strand at 4379.922 kb on + strand at 4379.944 kb on - strand at 4380.042 kb on + strand, within CA264_18870 at 4380.087 kb on - strand, within CA264_18870 at 4380.209 kb on + strand, within CA264_18870 at 4380.209 kb on + strand, within CA264_18870 at 4380.209 kb on + strand, within CA264_18870 at 4380.209 kb on + strand, within CA264_18870 at 4380.210 kb on - strand, within CA264_18870 at 4380.210 kb on - strand, within CA264_18870 at 4380.210 kb on - strand, within CA264_18870 at 4380.219 kb on - strand, within CA264_18870 at 4380.219 kb on - strand, within CA264_18870 at 4380.248 kb on + strand, within CA264_18870 at 4380.265 kb on + strand, within CA264_18870 at 4380.265 kb on + strand, within CA264_18870 at 4380.276 kb on - strand, within CA264_18870 at 4380.293 kb on - strand, within CA264_18870 at 4380.307 kb on + strand, within CA264_18870 at 4380.386 kb on + strand at 4380.388 kb on + strand at 4380.388 kb on + strand at 4380.423 kb on - strand at 4380.469 kb on + strand at 4380.525 kb on + strand at 4380.526 kb on - strand at 4380.575 kb on + strand at 4380.575 kb on + strand at 4380.576 kb on - strand at 4380.642 kb on + strand at 4380.686 kb on + strand, within CA264_18875 at 4380.694 kb on - strand, within CA264_18875 at 4380.735 kb on + strand, within CA264_18875 at 4380.736 kb on - strand, within CA264_18875 at 4380.772 kb on - strand, within CA264_18875 at 4380.990 kb on + strand, within CA264_18875 at 4380.996 kb on + strand, within CA264_18875 at 4380.996 kb on + strand, within CA264_18875 at 4381.042 kb on - strand at 4381.047 kb on + strand at 4381.048 kb on - strand at 4381.133 kb on + strand at 4381.137 kb on + strand at 4381.138 kb on - strand at 4381.138 kb on - strand at 4381.151 kb on + strand, within CA264_18880 at 4381.151 kb on + strand, within CA264_18880 at 4381.300 kb on + strand, within CA264_18880 at 4381.338 kb on + strand, within CA264_18880 at 4381.354 kb on - strand, within CA264_18880 at 4381.362 kb on - strand, within CA264_18880 at 4381.380 kb on - strand at 4381.392 kb on - strand at 4381.407 kb on + strand at 4381.408 kb on - strand at 4381.410 kb on - strand at 4381.410 kb on - strand at 4381.410 kb on - strand at 4381.410 kb on - strand at 4381.410 kb on - strand at 4381.412 kb on - strand at 4381.415 kb on + strand at 4381.416 kb on - strand at 4381.416 kb on - strand at 4381.416 kb on - strand at 4381.419 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM remove 4,378,934 - CA264_18865 0.24 -0.3 4,378,934 - CA264_18865 0.24 +1.1 4,378,979 + CA264_18865 0.28 -0.5 4,379,016 - CA264_18865 0.31 -0.0 4,379,016 - CA264_18865 0.31 +1.5 4,379,026 - CA264_18865 0.32 +1.6 4,379,122 - CA264_18865 0.41 +0.8 4,379,133 - CA264_18865 0.42 -0.1 4,379,213 + CA264_18865 0.49 +0.3 4,379,214 - CA264_18865 0.49 -0.4 4,379,214 - CA264_18865 0.49 -0.6 4,379,219 + CA264_18865 0.49 +0.2 4,379,220 - CA264_18865 0.49 +0.6 4,379,456 + CA264_18865 0.70 +0.2 4,379,456 + CA264_18865 0.70 +0.7 4,379,526 + CA264_18865 0.76 +0.4 4,379,527 - CA264_18865 0.76 +0.8 4,379,623 + CA264_18865 0.85 -0.1 4,379,623 + CA264_18865 0.85 -0.1 4,379,809 - +0.2 4,379,809 - +0.1 4,379,819 + -0.3 4,379,819 + +0.8 4,379,838 - +0.2 4,379,854 + +0.8 4,379,860 + -0.1 4,379,873 + +0.8 4,379,893 + -0.2 4,379,920 + +0.2 4,379,921 - -0.1 4,379,922 + +0.2 4,379,944 - -0.0 4,380,042 + CA264_18870 0.26 -0.1 4,380,087 - CA264_18870 0.34 -0.8 4,380,209 + CA264_18870 0.58 +0.2 4,380,209 + CA264_18870 0.58 -0.6 4,380,209 + CA264_18870 0.58 +0.2 4,380,209 + CA264_18870 0.58 -0.2 4,380,210 - CA264_18870 0.58 -0.2 4,380,210 - CA264_18870 0.58 +0.4 4,380,210 - CA264_18870 0.58 -0.1 4,380,219 - CA264_18870 0.60 -1.8 4,380,219 - CA264_18870 0.60 +0.3 4,380,248 + CA264_18870 0.66 -1.9 4,380,265 + CA264_18870 0.69 -0.8 4,380,265 + CA264_18870 0.69 +0.1 4,380,276 - CA264_18870 0.71 +0.1 4,380,293 - CA264_18870 0.74 -0.0 4,380,307 + CA264_18870 0.77 +0.8 4,380,386 + -0.6 4,380,388 + -0.6 4,380,388 + -0.7 4,380,423 - -0.3 4,380,469 + +0.1 4,380,525 + +0.7 4,380,526 - +0.0 4,380,575 + +0.2 4,380,575 + +1.0 4,380,576 - +0.7 4,380,642 + +0.8 4,380,686 + CA264_18875 0.25 +1.4 4,380,694 - CA264_18875 0.27 +1.3 4,380,735 + CA264_18875 0.34 -0.5 4,380,736 - CA264_18875 0.35 -0.1 4,380,772 - CA264_18875 0.41 -0.0 4,380,990 + CA264_18875 0.82 -0.1 4,380,996 + CA264_18875 0.84 +0.2 4,380,996 + CA264_18875 0.84 +0.9 4,381,042 - -0.1 4,381,047 + +0.5 4,381,048 - -0.1 4,381,133 + -0.8 4,381,137 + -0.4 4,381,138 - +0.2 4,381,138 - -0.6 4,381,151 + CA264_18880 0.11 -0.1 4,381,151 + CA264_18880 0.11 -0.3 4,381,300 + CA264_18880 0.63 -0.3 4,381,338 + CA264_18880 0.76 -0.7 4,381,354 - CA264_18880 0.82 +0.5 4,381,362 - CA264_18880 0.85 -1.1 4,381,380 - +0.9 4,381,392 - -0.1 4,381,407 + -0.6 4,381,408 - -0.3 4,381,410 - -1.1 4,381,410 - +0.7 4,381,410 - -0.4 4,381,410 - +0.2 4,381,410 - -1.1 4,381,412 - -0.1 4,381,415 + -1.1 4,381,416 - -1.0 4,381,416 - +0.8 4,381,416 - -0.7 4,381,419 + +0.1
Or see this region's nucleotide sequence