Experiment: m.b. Chlorite 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18860 and CA264_18865 are separated by 96 nucleotides CA264_18865 and CA264_18870 are separated by 109 nucleotides CA264_18870 and CA264_18875 are separated by 127 nucleotides
CA264_18860: CA264_18860 - TIGR00374 family protein, at 4,377,499 to 4,378,560
_18860
CA264_18865: CA264_18865 - monooxygenase, at 4,378,657 to 4,379,799
_18865
CA264_18870: CA264_18870 - hypothetical protein, at 4,379,909 to 4,380,424
_18870
CA264_18875: CA264_18875 - N-acetyltransferase, at 4,380,552 to 4,381,082
_18875
Position (kb)
4378
4379
4380 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4377.694 kb on + strand, within CA264_18860 at 4377.694 kb on + strand, within CA264_18860 at 4377.694 kb on + strand, within CA264_18860 at 4377.695 kb on - strand at 4377.696 kb on + strand, within CA264_18860 at 4377.696 kb on + strand, within CA264_18860 at 4377.697 kb on - strand, within CA264_18860 at 4377.868 kb on + strand, within CA264_18860 at 4377.869 kb on - strand, within CA264_18860 at 4377.869 kb on - strand, within CA264_18860 at 4377.869 kb on - strand, within CA264_18860 at 4377.906 kb on + strand, within CA264_18860 at 4377.906 kb on + strand, within CA264_18860 at 4378.007 kb on - strand, within CA264_18860 at 4378.011 kb on + strand, within CA264_18860 at 4378.012 kb on - strand, within CA264_18860 at 4378.012 kb on - strand, within CA264_18860 at 4378.016 kb on - strand, within CA264_18860 at 4378.016 kb on - strand, within CA264_18860 at 4378.016 kb on - strand, within CA264_18860 at 4378.026 kb on + strand, within CA264_18860 at 4378.026 kb on + strand, within CA264_18860 at 4378.027 kb on - strand, within CA264_18860 at 4378.027 kb on - strand, within CA264_18860 at 4378.027 kb on - strand, within CA264_18860 at 4378.033 kb on + strand, within CA264_18860 at 4378.035 kb on + strand, within CA264_18860 at 4378.035 kb on + strand, within CA264_18860 at 4378.035 kb on + strand, within CA264_18860 at 4378.036 kb on - strand, within CA264_18860 at 4378.051 kb on + strand, within CA264_18860 at 4378.052 kb on - strand, within CA264_18860 at 4378.052 kb on - strand, within CA264_18860 at 4378.052 kb on - strand, within CA264_18860 at 4378.052 kb on - strand, within CA264_18860 at 4378.052 kb on - strand, within CA264_18860 at 4378.052 kb on - strand, within CA264_18860 at 4378.052 kb on - strand, within CA264_18860 at 4378.197 kb on + strand, within CA264_18860 at 4378.198 kb on - strand, within CA264_18860 at 4378.198 kb on - strand, within CA264_18860 at 4378.202 kb on - strand, within CA264_18860 at 4378.249 kb on + strand, within CA264_18860 at 4378.465 kb on + strand at 4378.468 kb on + strand at 4378.521 kb on - strand at 4378.559 kb on - strand at 4378.654 kb on + strand at 4378.655 kb on - strand at 4378.671 kb on - strand at 4378.673 kb on + strand at 4378.721 kb on + strand at 4378.740 kb on - strand at 4378.741 kb on + strand at 4378.741 kb on + strand at 4378.800 kb on + strand, within CA264_18865 at 4378.800 kb on + strand, within CA264_18865 at 4378.801 kb on - strand, within CA264_18865 at 4378.801 kb on - strand, within CA264_18865 at 4378.874 kb on + strand, within CA264_18865 at 4378.934 kb on - strand, within CA264_18865 at 4378.934 kb on - strand, within CA264_18865 at 4378.979 kb on + strand, within CA264_18865 at 4379.016 kb on - strand, within CA264_18865 at 4379.016 kb on - strand, within CA264_18865 at 4379.026 kb on - strand, within CA264_18865 at 4379.122 kb on - strand, within CA264_18865 at 4379.133 kb on - strand, within CA264_18865 at 4379.213 kb on + strand, within CA264_18865 at 4379.214 kb on - strand, within CA264_18865 at 4379.214 kb on - strand, within CA264_18865 at 4379.219 kb on + strand, within CA264_18865 at 4379.220 kb on - strand, within CA264_18865 at 4379.456 kb on + strand, within CA264_18865 at 4379.456 kb on + strand, within CA264_18865 at 4379.526 kb on + strand, within CA264_18865 at 4379.527 kb on - strand, within CA264_18865 at 4379.623 kb on + strand, within CA264_18865 at 4379.623 kb on + strand, within CA264_18865 at 4379.809 kb on - strand at 4379.809 kb on - strand at 4379.819 kb on + strand at 4379.819 kb on + strand at 4379.838 kb on - strand at 4379.854 kb on + strand at 4379.860 kb on + strand at 4379.873 kb on + strand at 4379.893 kb on + strand at 4379.920 kb on + strand at 4379.921 kb on - strand at 4379.922 kb on + strand at 4379.944 kb on - strand at 4380.042 kb on + strand, within CA264_18870 at 4380.087 kb on - strand, within CA264_18870 at 4380.209 kb on + strand, within CA264_18870 at 4380.209 kb on + strand, within CA264_18870 at 4380.209 kb on + strand, within CA264_18870 at 4380.209 kb on + strand, within CA264_18870 at 4380.210 kb on - strand, within CA264_18870 at 4380.210 kb on - strand, within CA264_18870 at 4380.210 kb on - strand, within CA264_18870 at 4380.219 kb on - strand, within CA264_18870 at 4380.219 kb on - strand, within CA264_18870 at 4380.248 kb on + strand, within CA264_18870 at 4380.265 kb on + strand, within CA264_18870 at 4380.265 kb on + strand, within CA264_18870 at 4380.276 kb on - strand, within CA264_18870 at 4380.293 kb on - strand, within CA264_18870 at 4380.307 kb on + strand, within CA264_18870 at 4380.386 kb on + strand at 4380.388 kb on + strand at 4380.388 kb on + strand at 4380.423 kb on - strand at 4380.469 kb on + strand at 4380.525 kb on + strand at 4380.526 kb on - strand at 4380.575 kb on + strand at 4380.575 kb on + strand at 4380.576 kb on - strand at 4380.642 kb on + strand at 4380.686 kb on + strand, within CA264_18875 at 4380.694 kb on - strand, within CA264_18875 at 4380.735 kb on + strand, within CA264_18875 at 4380.736 kb on - strand, within CA264_18875 at 4380.772 kb on - strand, within CA264_18875
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM remove 4,377,694 + CA264_18860 0.18 -0.7 4,377,694 + CA264_18860 0.18 -0.1 4,377,694 + CA264_18860 0.18 -0.2 4,377,695 - +1.4 4,377,696 + CA264_18860 0.19 -0.5 4,377,696 + CA264_18860 0.19 -0.1 4,377,697 - CA264_18860 0.19 +1.0 4,377,868 + CA264_18860 0.35 +0.1 4,377,869 - CA264_18860 0.35 +0.3 4,377,869 - CA264_18860 0.35 -2.0 4,377,869 - CA264_18860 0.35 -0.4 4,377,906 + CA264_18860 0.38 +0.3 4,377,906 + CA264_18860 0.38 +0.9 4,378,007 - CA264_18860 0.48 -0.3 4,378,011 + CA264_18860 0.48 -0.1 4,378,012 - CA264_18860 0.48 +1.8 4,378,012 - CA264_18860 0.48 -1.5 4,378,016 - CA264_18860 0.49 -1.5 4,378,016 - CA264_18860 0.49 -0.8 4,378,016 - CA264_18860 0.49 +0.2 4,378,026 + CA264_18860 0.50 +0.4 4,378,026 + CA264_18860 0.50 -0.4 4,378,027 - CA264_18860 0.50 +1.3 4,378,027 - CA264_18860 0.50 -1.8 4,378,027 - CA264_18860 0.50 -0.2 4,378,033 + CA264_18860 0.50 -0.1 4,378,035 + CA264_18860 0.50 +0.5 4,378,035 + CA264_18860 0.50 -0.8 4,378,035 + CA264_18860 0.50 +0.5 4,378,036 - CA264_18860 0.51 +0.7 4,378,051 + CA264_18860 0.52 -0.3 4,378,052 - CA264_18860 0.52 +0.1 4,378,052 - CA264_18860 0.52 -0.9 4,378,052 - CA264_18860 0.52 -0.4 4,378,052 - CA264_18860 0.52 +0.1 4,378,052 - CA264_18860 0.52 -0.8 4,378,052 - CA264_18860 0.52 -1.5 4,378,052 - CA264_18860 0.52 -0.8 4,378,197 + CA264_18860 0.66 -0.2 4,378,198 - CA264_18860 0.66 -1.0 4,378,198 - CA264_18860 0.66 -0.0 4,378,202 - CA264_18860 0.66 -0.4 4,378,249 + CA264_18860 0.71 +0.1 4,378,465 + +0.3 4,378,468 + -0.9 4,378,521 - +0.0 4,378,559 - -0.7 4,378,654 + +0.0 4,378,655 - -0.3 4,378,671 - -1.6 4,378,673 + +1.1 4,378,721 + -0.3 4,378,740 - -0.4 4,378,741 + -1.4 4,378,741 + -0.1 4,378,800 + CA264_18865 0.13 -0.4 4,378,800 + CA264_18865 0.13 -1.0 4,378,801 - CA264_18865 0.13 -1.1 4,378,801 - CA264_18865 0.13 -0.7 4,378,874 + CA264_18865 0.19 -0.2 4,378,934 - CA264_18865 0.24 -0.3 4,378,934 - CA264_18865 0.24 +1.1 4,378,979 + CA264_18865 0.28 -0.5 4,379,016 - CA264_18865 0.31 -0.0 4,379,016 - CA264_18865 0.31 +1.5 4,379,026 - CA264_18865 0.32 +1.6 4,379,122 - CA264_18865 0.41 +0.8 4,379,133 - CA264_18865 0.42 -0.1 4,379,213 + CA264_18865 0.49 +0.3 4,379,214 - CA264_18865 0.49 -0.4 4,379,214 - CA264_18865 0.49 -0.6 4,379,219 + CA264_18865 0.49 +0.2 4,379,220 - CA264_18865 0.49 +0.6 4,379,456 + CA264_18865 0.70 +0.2 4,379,456 + CA264_18865 0.70 +0.7 4,379,526 + CA264_18865 0.76 +0.4 4,379,527 - CA264_18865 0.76 +0.8 4,379,623 + CA264_18865 0.85 -0.1 4,379,623 + CA264_18865 0.85 -0.1 4,379,809 - +0.2 4,379,809 - +0.1 4,379,819 + -0.3 4,379,819 + +0.8 4,379,838 - +0.2 4,379,854 + +0.8 4,379,860 + -0.1 4,379,873 + +0.8 4,379,893 + -0.2 4,379,920 + +0.2 4,379,921 - -0.1 4,379,922 + +0.2 4,379,944 - -0.0 4,380,042 + CA264_18870 0.26 -0.1 4,380,087 - CA264_18870 0.34 -0.8 4,380,209 + CA264_18870 0.58 +0.2 4,380,209 + CA264_18870 0.58 -0.6 4,380,209 + CA264_18870 0.58 +0.2 4,380,209 + CA264_18870 0.58 -0.2 4,380,210 - CA264_18870 0.58 -0.2 4,380,210 - CA264_18870 0.58 +0.4 4,380,210 - CA264_18870 0.58 -0.1 4,380,219 - CA264_18870 0.60 -1.8 4,380,219 - CA264_18870 0.60 +0.3 4,380,248 + CA264_18870 0.66 -1.9 4,380,265 + CA264_18870 0.69 -0.8 4,380,265 + CA264_18870 0.69 +0.1 4,380,276 - CA264_18870 0.71 +0.1 4,380,293 - CA264_18870 0.74 -0.0 4,380,307 + CA264_18870 0.77 +0.8 4,380,386 + -0.6 4,380,388 + -0.6 4,380,388 + -0.7 4,380,423 - -0.3 4,380,469 + +0.1 4,380,525 + +0.7 4,380,526 - +0.0 4,380,575 + +0.2 4,380,575 + +1.0 4,380,576 - +0.7 4,380,642 + +0.8 4,380,686 + CA264_18875 0.25 +1.4 4,380,694 - CA264_18875 0.27 +1.3 4,380,735 + CA264_18875 0.34 -0.5 4,380,736 - CA264_18875 0.35 -0.1 4,380,772 - CA264_18875 0.41 -0.0
Or see this region's nucleotide sequence