Experiment: m.b. Chlorite 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18850 and CA264_18855 are separated by 392 nucleotides CA264_18855 and CA264_18860 are separated by 132 nucleotides
CA264_18850: CA264_18850 - 1-deoxy-D-xylulose-5-phosphate synthase, at 4,374,311 to 4,376,227
_18850
CA264_18855: CA264_18855 - chromosome segregation protein ScpA, at 4,376,620 to 4,377,366
_18855
CA264_18860: CA264_18860 - TIGR00374 family protein, at 4,377,499 to 4,378,560
_18860
Position (kb)
4376
4377
4378 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4376.240 kb on - strand at 4376.241 kb on + strand at 4376.242 kb on - strand at 4376.242 kb on - strand at 4376.273 kb on + strand at 4376.277 kb on + strand at 4376.315 kb on + strand at 4376.359 kb on - strand at 4376.364 kb on + strand at 4376.373 kb on + strand at 4376.374 kb on - strand at 4376.375 kb on + strand at 4376.382 kb on - strand at 4376.382 kb on - strand at 4376.382 kb on - strand at 4376.382 kb on - strand at 4376.385 kb on + strand at 4376.386 kb on - strand at 4376.386 kb on - strand at 4376.386 kb on - strand at 4376.386 kb on - strand at 4376.387 kb on + strand at 4376.392 kb on - strand at 4376.456 kb on - strand at 4376.460 kb on - strand at 4376.460 kb on - strand at 4376.484 kb on + strand at 4376.578 kb on + strand at 4376.580 kb on + strand at 4376.592 kb on + strand at 4376.770 kb on - strand, within CA264_18855 at 4376.775 kb on + strand, within CA264_18855 at 4376.899 kb on + strand, within CA264_18855 at 4376.970 kb on - strand, within CA264_18855 at 4377.046 kb on - strand, within CA264_18855 at 4377.119 kb on - strand, within CA264_18855 at 4377.365 kb on - strand at 4377.418 kb on - strand at 4377.421 kb on + strand at 4377.425 kb on - strand at 4377.465 kb on - strand at 4377.496 kb on + strand at 4377.496 kb on + strand at 4377.497 kb on - strand at 4377.497 kb on - strand at 4377.497 kb on - strand at 4377.497 kb on - strand at 4377.573 kb on - strand at 4377.611 kb on + strand, within CA264_18860 at 4377.694 kb on + strand, within CA264_18860 at 4377.694 kb on + strand, within CA264_18860 at 4377.694 kb on + strand, within CA264_18860 at 4377.695 kb on - strand at 4377.696 kb on + strand, within CA264_18860 at 4377.696 kb on + strand, within CA264_18860 at 4377.697 kb on - strand, within CA264_18860 at 4377.868 kb on + strand, within CA264_18860 at 4377.869 kb on - strand, within CA264_18860 at 4377.869 kb on - strand, within CA264_18860 at 4377.869 kb on - strand, within CA264_18860 at 4377.906 kb on + strand, within CA264_18860 at 4377.906 kb on + strand, within CA264_18860 at 4378.007 kb on - strand, within CA264_18860 at 4378.011 kb on + strand, within CA264_18860 at 4378.012 kb on - strand, within CA264_18860 at 4378.012 kb on - strand, within CA264_18860 at 4378.016 kb on - strand, within CA264_18860 at 4378.016 kb on - strand, within CA264_18860 at 4378.016 kb on - strand, within CA264_18860 at 4378.026 kb on + strand, within CA264_18860 at 4378.026 kb on + strand, within CA264_18860 at 4378.027 kb on - strand, within CA264_18860 at 4378.027 kb on - strand, within CA264_18860 at 4378.027 kb on - strand, within CA264_18860 at 4378.033 kb on + strand, within CA264_18860 at 4378.035 kb on + strand, within CA264_18860 at 4378.035 kb on + strand, within CA264_18860 at 4378.035 kb on + strand, within CA264_18860 at 4378.036 kb on - strand, within CA264_18860 at 4378.051 kb on + strand, within CA264_18860 at 4378.052 kb on - strand, within CA264_18860 at 4378.052 kb on - strand, within CA264_18860 at 4378.052 kb on - strand, within CA264_18860 at 4378.052 kb on - strand, within CA264_18860 at 4378.052 kb on - strand, within CA264_18860 at 4378.052 kb on - strand, within CA264_18860 at 4378.052 kb on - strand, within CA264_18860 at 4378.197 kb on + strand, within CA264_18860 at 4378.198 kb on - strand, within CA264_18860 at 4378.198 kb on - strand, within CA264_18860 at 4378.202 kb on - strand, within CA264_18860 at 4378.249 kb on + strand, within CA264_18860
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM remove 4,376,240 - -0.2 4,376,241 + -0.7 4,376,242 - -1.6 4,376,242 - -0.5 4,376,273 + -0.0 4,376,277 + -1.6 4,376,315 + -0.1 4,376,359 - -0.9 4,376,364 + +0.4 4,376,373 + -0.9 4,376,374 - -1.6 4,376,375 + -0.2 4,376,382 - +0.2 4,376,382 - -1.6 4,376,382 - -2.0 4,376,382 - -1.0 4,376,385 + -0.1 4,376,386 - -0.3 4,376,386 - -0.4 4,376,386 - -0.5 4,376,386 - -1.0 4,376,387 + -1.2 4,376,392 - -0.1 4,376,456 - -1.6 4,376,460 - -1.2 4,376,460 - -1.4 4,376,484 + -1.4 4,376,578 + +0.2 4,376,580 + +0.4 4,376,592 + -1.1 4,376,770 - CA264_18855 0.20 -1.8 4,376,775 + CA264_18855 0.21 -1.4 4,376,899 + CA264_18855 0.37 -1.2 4,376,970 - CA264_18855 0.47 +1.2 4,377,046 - CA264_18855 0.57 -0.6 4,377,119 - CA264_18855 0.67 -1.2 4,377,365 - +0.3 4,377,418 - -0.4 4,377,421 + -0.5 4,377,425 - -2.6 4,377,465 - -0.4 4,377,496 + -1.5 4,377,496 + -0.3 4,377,497 - +0.2 4,377,497 - -0.8 4,377,497 - -0.2 4,377,497 - +0.0 4,377,573 - -0.1 4,377,611 + CA264_18860 0.11 +0.5 4,377,694 + CA264_18860 0.18 -0.7 4,377,694 + CA264_18860 0.18 -0.1 4,377,694 + CA264_18860 0.18 -0.2 4,377,695 - +1.4 4,377,696 + CA264_18860 0.19 -0.5 4,377,696 + CA264_18860 0.19 -0.1 4,377,697 - CA264_18860 0.19 +1.0 4,377,868 + CA264_18860 0.35 +0.1 4,377,869 - CA264_18860 0.35 +0.3 4,377,869 - CA264_18860 0.35 -2.0 4,377,869 - CA264_18860 0.35 -0.4 4,377,906 + CA264_18860 0.38 +0.3 4,377,906 + CA264_18860 0.38 +0.9 4,378,007 - CA264_18860 0.48 -0.3 4,378,011 + CA264_18860 0.48 -0.1 4,378,012 - CA264_18860 0.48 +1.8 4,378,012 - CA264_18860 0.48 -1.5 4,378,016 - CA264_18860 0.49 -1.5 4,378,016 - CA264_18860 0.49 -0.8 4,378,016 - CA264_18860 0.49 +0.2 4,378,026 + CA264_18860 0.50 +0.4 4,378,026 + CA264_18860 0.50 -0.4 4,378,027 - CA264_18860 0.50 +1.3 4,378,027 - CA264_18860 0.50 -1.8 4,378,027 - CA264_18860 0.50 -0.2 4,378,033 + CA264_18860 0.50 -0.1 4,378,035 + CA264_18860 0.50 +0.5 4,378,035 + CA264_18860 0.50 -0.8 4,378,035 + CA264_18860 0.50 +0.5 4,378,036 - CA264_18860 0.51 +0.7 4,378,051 + CA264_18860 0.52 -0.3 4,378,052 - CA264_18860 0.52 +0.1 4,378,052 - CA264_18860 0.52 -0.9 4,378,052 - CA264_18860 0.52 -0.4 4,378,052 - CA264_18860 0.52 +0.1 4,378,052 - CA264_18860 0.52 -0.8 4,378,052 - CA264_18860 0.52 -1.5 4,378,052 - CA264_18860 0.52 -0.8 4,378,197 + CA264_18860 0.66 -0.2 4,378,198 - CA264_18860 0.66 -1.0 4,378,198 - CA264_18860 0.66 -0.0 4,378,202 - CA264_18860 0.66 -0.4 4,378,249 + CA264_18860 0.71 +0.1
Or see this region's nucleotide sequence