Experiment: m.b. Chlorite 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17740 and CA264_17745 are separated by 91 nucleotides CA264_17745 and CA264_17750 are separated by 12 nucleotides CA264_17750 and CA264_17755 are separated by 147 nucleotides
CA264_17740: CA264_17740 - AraC family transcriptional regulator, at 4,128,615 to 4,129,133
_17740
CA264_17745: CA264_17745 - TetR family transcriptional regulator, at 4,129,225 to 4,129,836
_17745
CA264_17750: CA264_17750 - hypothetical protein, at 4,129,849 to 4,130,259
_17750
CA264_17755: CA264_17755 - ABC transporter, at 4,130,407 to 4,132,191
_17755
Position (kb)
4129
4130
4131 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4128.849 kb on + strand, within CA264_17740 at 4128.921 kb on - strand, within CA264_17740 at 4129.021 kb on - strand, within CA264_17740 at 4129.021 kb on - strand, within CA264_17740 at 4129.021 kb on - strand, within CA264_17740 at 4129.074 kb on + strand, within CA264_17740 at 4129.074 kb on + strand, within CA264_17740 at 4129.078 kb on + strand, within CA264_17740 at 4129.078 kb on + strand, within CA264_17740 at 4129.079 kb on - strand, within CA264_17740 at 4129.138 kb on + strand at 4129.139 kb on - strand at 4129.156 kb on - strand at 4129.158 kb on + strand at 4129.158 kb on + strand at 4129.158 kb on + strand at 4129.158 kb on + strand at 4129.158 kb on + strand at 4129.159 kb on - strand at 4129.159 kb on - strand at 4129.159 kb on - strand at 4129.159 kb on - strand at 4129.162 kb on - strand at 4129.162 kb on - strand at 4129.164 kb on - strand at 4129.212 kb on + strand at 4129.212 kb on + strand at 4129.213 kb on - strand at 4129.213 kb on - strand at 4129.216 kb on + strand at 4129.217 kb on - strand at 4129.217 kb on - strand at 4129.293 kb on - strand, within CA264_17745 at 4129.357 kb on + strand, within CA264_17745 at 4129.360 kb on + strand, within CA264_17745 at 4129.360 kb on + strand, within CA264_17745 at 4129.361 kb on - strand, within CA264_17745 at 4129.366 kb on + strand, within CA264_17745 at 4129.484 kb on - strand, within CA264_17745 at 4129.505 kb on - strand, within CA264_17745 at 4129.613 kb on - strand, within CA264_17745 at 4129.792 kb on + strand at 4129.793 kb on - strand at 4129.850 kb on + strand at 4129.850 kb on + strand at 4129.851 kb on - strand at 4129.865 kb on + strand at 4129.865 kb on + strand at 4129.865 kb on + strand at 4129.865 kb on + strand at 4129.874 kb on - strand at 4129.894 kb on + strand, within CA264_17750 at 4129.895 kb on - strand, within CA264_17750 at 4129.967 kb on + strand, within CA264_17750 at 4130.059 kb on + strand, within CA264_17750 at 4130.061 kb on + strand, within CA264_17750 at 4130.062 kb on - strand, within CA264_17750 at 4130.062 kb on - strand, within CA264_17750 at 4130.062 kb on - strand, within CA264_17750 at 4130.237 kb on - strand at 4130.237 kb on - strand at 4130.283 kb on + strand at 4130.283 kb on + strand at 4130.284 kb on - strand at 4130.291 kb on - strand at 4130.304 kb on + strand at 4130.308 kb on + strand at 4130.309 kb on - strand at 4130.362 kb on + strand at 4130.363 kb on - strand at 4130.469 kb on + strand at 4130.565 kb on + strand at 4130.566 kb on - strand at 4130.730 kb on + strand, within CA264_17755 at 4130.731 kb on - strand, within CA264_17755 at 4130.790 kb on - strand, within CA264_17755
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM remove 4,128,849 + CA264_17740 0.45 +0.2 4,128,921 - CA264_17740 0.59 +2.1 4,129,021 - CA264_17740 0.78 -0.7 4,129,021 - CA264_17740 0.78 -0.4 4,129,021 - CA264_17740 0.78 -0.3 4,129,074 + CA264_17740 0.88 +0.5 4,129,074 + CA264_17740 0.88 -0.5 4,129,078 + CA264_17740 0.89 -1.9 4,129,078 + CA264_17740 0.89 -0.6 4,129,079 - CA264_17740 0.89 +1.8 4,129,138 + -0.5 4,129,139 - -0.4 4,129,156 - -0.8 4,129,158 + -1.5 4,129,158 + +0.2 4,129,158 + +1.4 4,129,158 + -0.6 4,129,158 + +0.3 4,129,159 - +0.2 4,129,159 - +0.1 4,129,159 - +0.5 4,129,159 - +1.2 4,129,162 - +0.3 4,129,162 - +0.2 4,129,164 - +0.7 4,129,212 + +2.4 4,129,212 + -0.5 4,129,213 - +0.6 4,129,213 - -0.4 4,129,216 + +0.2 4,129,217 - +0.1 4,129,217 - +0.6 4,129,293 - CA264_17745 0.11 +0.8 4,129,357 + CA264_17745 0.22 +0.0 4,129,360 + CA264_17745 0.22 +0.1 4,129,360 + CA264_17745 0.22 +1.4 4,129,361 - CA264_17745 0.22 -1.5 4,129,366 + CA264_17745 0.23 +0.1 4,129,484 - CA264_17745 0.42 +0.2 4,129,505 - CA264_17745 0.46 +0.0 4,129,613 - CA264_17745 0.63 +0.4 4,129,792 + -0.0 4,129,793 - -0.1 4,129,850 + +0.2 4,129,850 + +0.3 4,129,851 - -0.2 4,129,865 + +0.4 4,129,865 + -0.2 4,129,865 + -0.8 4,129,865 + +1.7 4,129,874 - -0.7 4,129,894 + CA264_17750 0.11 +0.3 4,129,895 - CA264_17750 0.11 -0.4 4,129,967 + CA264_17750 0.29 -0.1 4,130,059 + CA264_17750 0.51 +0.9 4,130,061 + CA264_17750 0.52 +1.5 4,130,062 - CA264_17750 0.52 +0.9 4,130,062 - CA264_17750 0.52 +0.3 4,130,062 - CA264_17750 0.52 +0.2 4,130,237 - -0.4 4,130,237 - -0.4 4,130,283 + -1.4 4,130,283 + +1.2 4,130,284 - +0.7 4,130,291 - -0.2 4,130,304 + +0.1 4,130,308 + +2.1 4,130,309 - -0.7 4,130,362 + -0.8 4,130,363 - -0.5 4,130,469 + +0.3 4,130,565 + -0.3 4,130,566 - +0.8 4,130,730 + CA264_17755 0.18 +0.1 4,130,731 - CA264_17755 0.18 -0.7 4,130,790 - CA264_17755 0.21 -1.5
Or see this region's nucleotide sequence