Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_16815

Experiment: m.b. Chlorite 0.2 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_16810 and CA264_16815 are separated by 513 nucleotidesCA264_16815 and CA264_16820 are separated by 272 nucleotides CA264_16810: CA264_16810 - hypothetical protein, at 3,923,227 to 3,924,711 _16810 CA264_16815: CA264_16815 - hypothetical protein, at 3,925,225 to 3,925,629 _16815 CA264_16820: CA264_16820 - hypothetical protein, at 3,925,902 to 3,926,468 _16820 Position (kb) 3925 3926Strain fitness (log2 ratio) -2 -1 0 1at 3924.243 kb on - strand, within CA264_16810at 3924.248 kb on - strand, within CA264_16810at 3924.249 kb on + strand, within CA264_16810at 3924.250 kb on - strand, within CA264_16810at 3924.287 kb on + strand, within CA264_16810at 3924.288 kb on - strand, within CA264_16810at 3924.288 kb on - strand, within CA264_16810at 3924.291 kb on + strand, within CA264_16810at 3924.291 kb on + strand, within CA264_16810at 3924.291 kb on + strand, within CA264_16810at 3924.292 kb on - strand, within CA264_16810at 3924.294 kb on + strand, within CA264_16810at 3924.338 kb on + strand, within CA264_16810at 3924.338 kb on + strand, within CA264_16810at 3924.338 kb on + strand, within CA264_16810at 3924.342 kb on - strand, within CA264_16810at 3924.353 kb on + strand, within CA264_16810at 3924.377 kb on + strand, within CA264_16810at 3924.387 kb on - strand, within CA264_16810at 3924.402 kb on + strand, within CA264_16810at 3924.402 kb on + strand, within CA264_16810at 3924.458 kb on + strand, within CA264_16810at 3924.458 kb on + strand, within CA264_16810at 3924.480 kb on + strand, within CA264_16810at 3924.480 kb on + strand, within CA264_16810at 3924.480 kb on + strand, within CA264_16810at 3924.525 kb on - strand, within CA264_16810at 3924.553 kb on - strand, within CA264_16810at 3924.568 kb on + strandat 3924.568 kb on + strandat 3924.568 kb on + strandat 3924.568 kb on + strandat 3924.569 kb on - strandat 3924.569 kb on - strandat 3924.569 kb on - strandat 3924.569 kb on - strandat 3924.598 kb on + strandat 3924.611 kb on + strandat 3924.629 kb on + strandat 3924.630 kb on - strandat 3924.630 kb on - strandat 3924.674 kb on + strandat 3924.678 kb on + strandat 3924.678 kb on + strandat 3924.681 kb on + strandat 3924.682 kb on - strandat 3924.682 kb on - strandat 3924.713 kb on + strandat 3924.714 kb on - strandat 3924.726 kb on + strandat 3924.849 kb on - strandat 3924.868 kb on + strandat 3924.877 kb on - strandat 3924.905 kb on + strandat 3924.905 kb on + strandat 3924.907 kb on + strandat 3924.908 kb on - strandat 3924.908 kb on - strandat 3925.017 kb on - strandat 3925.019 kb on - strandat 3925.027 kb on - strandat 3925.058 kb on + strandat 3925.081 kb on + strandat 3925.092 kb on + strandat 3925.093 kb on - strandat 3925.114 kb on - strandat 3925.114 kb on - strandat 3925.114 kb on - strandat 3925.127 kb on + strandat 3925.138 kb on + strandat 3925.138 kb on + strandat 3925.149 kb on + strandat 3925.192 kb on + strandat 3925.298 kb on + strand, within CA264_16815at 3925.298 kb on + strand, within CA264_16815at 3925.298 kb on + strand, within CA264_16815at 3925.299 kb on - strand, within CA264_16815at 3925.299 kb on - strand, within CA264_16815at 3925.299 kb on - strand, within CA264_16815at 3925.299 kb on - strand, within CA264_16815at 3925.406 kb on + strand, within CA264_16815at 3925.406 kb on + strand, within CA264_16815at 3925.406 kb on + strand, within CA264_16815at 3925.441 kb on + strand, within CA264_16815at 3925.441 kb on + strand, within CA264_16815at 3925.518 kb on - strand, within CA264_16815at 3925.620 kb on - strandat 3925.696 kb on + strandat 3925.696 kb on + strandat 3925.733 kb on - strandat 3925.903 kb on + strandat 3925.917 kb on - strandat 3925.924 kb on - strandat 3925.924 kb on - strandat 3925.928 kb on + strandat 3926.054 kb on - strand, within CA264_16820at 3926.135 kb on + strand, within CA264_16820at 3926.147 kb on + strand, within CA264_16820at 3926.148 kb on - strand, within CA264_16820at 3926.149 kb on + strand, within CA264_16820at 3926.149 kb on + strand, within CA264_16820at 3926.203 kb on + strand, within CA264_16820at 3926.252 kb on - strand, within CA264_16820at 3926.279 kb on + strand, within CA264_16820at 3926.287 kb on + strand, within CA264_16820at 3926.288 kb on - strand, within CA264_16820at 3926.288 kb on - strand, within CA264_16820at 3926.288 kb on - strand, within CA264_16820at 3926.372 kb on + strand, within CA264_16820at 3926.373 kb on - strand, within CA264_16820at 3926.417 kb on + strandat 3926.507 kb on - strandat 3926.507 kb on - strandat 3926.521 kb on - strandat 3926.521 kb on - strandat 3926.566 kb on - strandat 3926.583 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM
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3,924,243 - CA264_16810 0.68 +0.3
3,924,248 - CA264_16810 0.69 -0.7
3,924,249 + CA264_16810 0.69 +0.5
3,924,250 - CA264_16810 0.69 +0.3
3,924,287 + CA264_16810 0.71 -0.4
3,924,288 - CA264_16810 0.71 +0.0
3,924,288 - CA264_16810 0.71 -0.5
3,924,291 + CA264_16810 0.72 -0.4
3,924,291 + CA264_16810 0.72 -0.3
3,924,291 + CA264_16810 0.72 -1.8
3,924,292 - CA264_16810 0.72 -0.3
3,924,294 + CA264_16810 0.72 +0.5
3,924,338 + CA264_16810 0.75 -0.2
3,924,338 + CA264_16810 0.75 +0.8
3,924,338 + CA264_16810 0.75 +0.1
3,924,342 - CA264_16810 0.75 +1.1
3,924,353 + CA264_16810 0.76 +0.1
3,924,377 + CA264_16810 0.77 -0.8
3,924,387 - CA264_16810 0.78 -0.0
3,924,402 + CA264_16810 0.79 -1.1
3,924,402 + CA264_16810 0.79 -0.3
3,924,458 + CA264_16810 0.83 +0.3
3,924,458 + CA264_16810 0.83 -0.4
3,924,480 + CA264_16810 0.84 -0.2
3,924,480 + CA264_16810 0.84 +0.5
3,924,480 + CA264_16810 0.84 -1.5
3,924,525 - CA264_16810 0.87 -0.5
3,924,553 - CA264_16810 0.89 -0.6
3,924,568 + -0.2
3,924,568 + +0.0
3,924,568 + +0.6
3,924,568 + -0.4
3,924,569 - -0.3
3,924,569 - +0.2
3,924,569 - +0.5
3,924,569 - +0.7
3,924,598 + +0.8
3,924,611 + +0.5
3,924,629 + +1.1
3,924,630 - +0.5
3,924,630 - -0.2
3,924,674 + -0.6
3,924,678 + -0.2
3,924,678 + -0.6
3,924,681 + -0.4
3,924,682 - +0.2
3,924,682 - +0.5
3,924,713 + -1.0
3,924,714 - -0.1
3,924,726 + -0.4
3,924,849 - -0.8
3,924,868 + -0.2
3,924,877 - -1.0
3,924,905 + -0.1
3,924,905 + +0.3
3,924,907 + +0.2
3,924,908 - +1.3
3,924,908 - -1.8
3,925,017 - +0.0
3,925,019 - +1.1
3,925,027 - +0.1
3,925,058 + +0.2
3,925,081 + +0.8
3,925,092 + +0.1
3,925,093 - -1.8
3,925,114 - +0.1
3,925,114 - +0.1
3,925,114 - +0.7
3,925,127 + +0.3
3,925,138 + +1.7
3,925,138 + -0.4
3,925,149 + +0.5
3,925,192 + +0.4
3,925,298 + CA264_16815 0.18 +0.8
3,925,298 + CA264_16815 0.18 -0.6
3,925,298 + CA264_16815 0.18 +0.1
3,925,299 - CA264_16815 0.18 +0.6
3,925,299 - CA264_16815 0.18 -0.3
3,925,299 - CA264_16815 0.18 +0.3
3,925,299 - CA264_16815 0.18 +1.4
3,925,406 + CA264_16815 0.45 -0.1
3,925,406 + CA264_16815 0.45 +0.6
3,925,406 + CA264_16815 0.45 -0.0
3,925,441 + CA264_16815 0.53 +0.3
3,925,441 + CA264_16815 0.53 -0.1
3,925,518 - CA264_16815 0.72 +0.1
3,925,620 - -0.1
3,925,696 + -0.4
3,925,696 + -0.3
3,925,733 - -0.1
3,925,903 + +0.7
3,925,917 - -0.2
3,925,924 - -0.5
3,925,924 - +0.1
3,925,928 + -1.1
3,926,054 - CA264_16820 0.27 +0.8
3,926,135 + CA264_16820 0.41 -0.6
3,926,147 + CA264_16820 0.43 +0.1
3,926,148 - CA264_16820 0.43 +0.0
3,926,149 + CA264_16820 0.44 -0.5
3,926,149 + CA264_16820 0.44 -0.4
3,926,203 + CA264_16820 0.53 +0.3
3,926,252 - CA264_16820 0.62 -0.6
3,926,279 + CA264_16820 0.66 -1.8
3,926,287 + CA264_16820 0.68 +0.8
3,926,288 - CA264_16820 0.68 +0.7
3,926,288 - CA264_16820 0.68 -0.3
3,926,288 - CA264_16820 0.68 +0.4
3,926,372 + CA264_16820 0.83 -0.3
3,926,373 - CA264_16820 0.83 +0.4
3,926,417 + +0.9
3,926,507 - -0.1
3,926,507 - -0.0
3,926,521 - -1.8
3,926,521 - -1.7
3,926,566 - +0.7
3,926,583 + +0.6

Or see this region's nucleotide sequence