Experiment: m.b. Chlorite 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_15535 and CA264_15540 are separated by 140 nucleotides CA264_15540 and CA264_15545 are separated by 145 nucleotides CA264_15545 and CA264_15550 are separated by 185 nucleotides
CA264_15535: CA264_15535 - hypothetical protein, at 3,635,627 to 3,637,801
_15535
CA264_15540: CA264_15540 - hypothetical protein, at 3,637,942 to 3,638,724
_15540
CA264_15545: CA264_15545 - YajQ family cyclic di-GMP-binding protein, at 3,638,870 to 3,639,367
_15545
CA264_15550: CA264_15550 - GNAT family N-acetyltransferase, at 3,639,553 to 3,639,984
_15550
Position (kb)
3637
3638
3639 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3637.122 kb on + strand, within CA264_15535 at 3637.140 kb on + strand, within CA264_15535 at 3637.141 kb on - strand, within CA264_15535 at 3637.284 kb on + strand, within CA264_15535 at 3637.488 kb on + strand, within CA264_15535 at 3637.489 kb on - strand, within CA264_15535 at 3637.722 kb on - strand at 3637.724 kb on + strand at 3637.724 kb on + strand at 3637.724 kb on + strand at 3637.725 kb on - strand at 3637.728 kb on + strand at 3637.815 kb on - strand at 3637.826 kb on - strand at 3637.826 kb on - strand at 3637.836 kb on + strand at 3637.836 kb on + strand at 3637.837 kb on - strand at 3637.936 kb on - strand at 3637.936 kb on - strand at 3637.939 kb on + strand at 3637.940 kb on - strand at 3638.067 kb on + strand, within CA264_15540 at 3638.067 kb on + strand, within CA264_15540 at 3638.068 kb on - strand, within CA264_15540 at 3638.112 kb on + strand, within CA264_15540 at 3638.112 kb on + strand, within CA264_15540 at 3638.182 kb on + strand, within CA264_15540 at 3638.186 kb on + strand, within CA264_15540 at 3638.187 kb on - strand, within CA264_15540 at 3638.187 kb on - strand, within CA264_15540 at 3638.187 kb on - strand, within CA264_15540 at 3638.479 kb on - strand, within CA264_15540 at 3638.533 kb on - strand, within CA264_15540 at 3638.533 kb on - strand, within CA264_15540 at 3638.646 kb on + strand at 3638.646 kb on + strand at 3638.646 kb on + strand at 3638.646 kb on + strand at 3638.646 kb on + strand at 3638.647 kb on - strand at 3638.647 kb on - strand at 3638.647 kb on - strand at 3638.653 kb on - strand at 3638.692 kb on + strand at 3638.693 kb on - strand at 3638.724 kb on + strand at 3638.724 kb on + strand at 3638.725 kb on - strand at 3638.730 kb on + strand at 3638.730 kb on + strand at 3638.730 kb on + strand at 3638.731 kb on - strand at 3638.766 kb on + strand at 3638.799 kb on + strand at 3638.799 kb on + strand at 3638.857 kb on + strand at 3639.017 kb on - strand, within CA264_15545 at 3639.074 kb on + strand, within CA264_15545 at 3639.111 kb on + strand, within CA264_15545 at 3639.246 kb on + strand, within CA264_15545 at 3639.251 kb on + strand, within CA264_15545 at 3639.252 kb on - strand, within CA264_15545 at 3639.252 kb on - strand, within CA264_15545 at 3639.339 kb on - strand at 3639.339 kb on - strand at 3639.339 kb on - strand at 3639.339 kb on - strand at 3639.348 kb on - strand at 3639.348 kb on - strand at 3639.433 kb on + strand at 3639.456 kb on - strand at 3639.504 kb on + strand at 3639.504 kb on + strand at 3639.535 kb on - strand at 3639.541 kb on - strand at 3639.552 kb on + strand at 3639.553 kb on - strand at 3639.553 kb on - strand at 3639.553 kb on - strand at 3639.563 kb on + strand at 3639.563 kb on + strand at 3639.563 kb on + strand at 3639.596 kb on - strand at 3639.599 kb on - strand, within CA264_15550 at 3639.695 kb on + strand, within CA264_15550
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM remove 3,637,122 + CA264_15535 0.69 -0.0 3,637,140 + CA264_15535 0.70 -0.1 3,637,141 - CA264_15535 0.70 -0.6 3,637,284 + CA264_15535 0.76 +0.1 3,637,488 + CA264_15535 0.86 -0.3 3,637,489 - CA264_15535 0.86 -0.4 3,637,722 - +0.0 3,637,724 + -0.8 3,637,724 + -0.1 3,637,724 + -0.7 3,637,725 - -2.0 3,637,728 + -0.7 3,637,815 - +0.1 3,637,826 - -1.2 3,637,826 - +0.3 3,637,836 + -0.1 3,637,836 + +0.0 3,637,837 - +0.2 3,637,936 - +0.9 3,637,936 - -0.3 3,637,939 + -0.9 3,637,940 - +1.2 3,638,067 + CA264_15540 0.16 +1.9 3,638,067 + CA264_15540 0.16 +0.5 3,638,068 - CA264_15540 0.16 +2.0 3,638,112 + CA264_15540 0.22 +0.2 3,638,112 + CA264_15540 0.22 +0.1 3,638,182 + CA264_15540 0.31 -1.1 3,638,186 + CA264_15540 0.31 -0.4 3,638,187 - CA264_15540 0.31 -1.3 3,638,187 - CA264_15540 0.31 -0.2 3,638,187 - CA264_15540 0.31 -0.3 3,638,479 - CA264_15540 0.69 -0.5 3,638,533 - CA264_15540 0.75 +0.3 3,638,533 - CA264_15540 0.75 +0.4 3,638,646 + -0.8 3,638,646 + +1.0 3,638,646 + +2.4 3,638,646 + +1.4 3,638,646 + -0.3 3,638,647 - +0.6 3,638,647 - -1.1 3,638,647 - +0.4 3,638,653 - +0.0 3,638,692 + -0.3 3,638,693 - +0.1 3,638,724 + -0.3 3,638,724 + +0.3 3,638,725 - +0.4 3,638,730 + -0.0 3,638,730 + -0.2 3,638,730 + -1.4 3,638,731 - +1.8 3,638,766 + +0.3 3,638,799 + -0.6 3,638,799 + +0.1 3,638,857 + -0.3 3,639,017 - CA264_15545 0.30 -0.4 3,639,074 + CA264_15545 0.41 -0.7 3,639,111 + CA264_15545 0.48 +0.4 3,639,246 + CA264_15545 0.76 -0.6 3,639,251 + CA264_15545 0.77 -0.5 3,639,252 - CA264_15545 0.77 -0.7 3,639,252 - CA264_15545 0.77 +0.8 3,639,339 - +0.2 3,639,339 - -0.2 3,639,339 - -0.4 3,639,339 - +0.2 3,639,348 - -0.6 3,639,348 - -0.2 3,639,433 + -0.9 3,639,456 - -0.4 3,639,504 + +0.9 3,639,504 + +1.1 3,639,535 - -1.3 3,639,541 - +0.6 3,639,552 + -0.5 3,639,553 - -1.1 3,639,553 - -0.2 3,639,553 - -0.6 3,639,563 + -0.3 3,639,563 + -0.3 3,639,563 + -0.4 3,639,596 - -1.3 3,639,599 - CA264_15550 0.11 -0.2 3,639,695 + CA264_15550 0.33 +0.3
Or see this region's nucleotide sequence