Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_11385

Experiment: m.b. Chlorite 0.2 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_11380 and CA264_11385 are separated by 469 nucleotidesCA264_11385 and CA264_11390 are separated by 300 nucleotides CA264_11380: CA264_11380 - hypothetical protein, at 2,636,207 to 2,637,736 _11380 CA264_11385: CA264_11385 - hypothetical protein, at 2,638,206 to 2,638,529 _11385 CA264_11390: CA264_11390 - hypothetical protein, at 2,638,830 to 2,639,228 _11390 Position (kb) 2638 2639Strain fitness (log2 ratio) -2 -1 0 1 2at 2637.213 kb on + strand, within CA264_11380at 2637.243 kb on + strand, within CA264_11380at 2637.322 kb on + strand, within CA264_11380at 2637.337 kb on - strand, within CA264_11380at 2637.376 kb on - strand, within CA264_11380at 2637.376 kb on - strand, within CA264_11380at 2637.384 kb on + strand, within CA264_11380at 2637.385 kb on - strand, within CA264_11380at 2637.486 kb on + strand, within CA264_11380at 2637.543 kb on + strand, within CA264_11380at 2637.544 kb on - strand, within CA264_11380at 2637.544 kb on - strand, within CA264_11380at 2637.549 kb on - strand, within CA264_11380at 2637.549 kb on - strand, within CA264_11380at 2637.598 kb on - strandat 2637.716 kb on + strandat 2637.717 kb on - strandat 2637.749 kb on + strandat 2637.750 kb on - strandat 2637.750 kb on - strandat 2637.759 kb on + strandat 2637.771 kb on + strandat 2637.772 kb on - strandat 2637.785 kb on - strandat 2637.785 kb on - strandat 2637.788 kb on + strandat 2637.789 kb on - strandat 2637.812 kb on - strandat 2637.860 kb on + strandat 2637.860 kb on + strandat 2637.862 kb on + strandat 2637.863 kb on - strandat 2637.875 kb on + strandat 2637.925 kb on + strandat 2637.972 kb on + strandat 2637.990 kb on + strandat 2637.991 kb on - strandat 2637.992 kb on + strandat 2637.992 kb on + strandat 2637.993 kb on - strandat 2637.993 kb on - strandat 2637.993 kb on - strandat 2638.068 kb on + strandat 2638.068 kb on + strandat 2638.068 kb on + strandat 2638.069 kb on - strandat 2638.093 kb on + strandat 2638.093 kb on + strandat 2638.094 kb on - strandat 2638.151 kb on - strandat 2638.269 kb on - strand, within CA264_11385at 2638.324 kb on + strand, within CA264_11385at 2638.397 kb on - strand, within CA264_11385at 2638.397 kb on - strand, within CA264_11385at 2638.397 kb on - strand, within CA264_11385at 2638.401 kb on + strand, within CA264_11385at 2638.402 kb on - strand, within CA264_11385at 2638.402 kb on - strand, within CA264_11385at 2638.410 kb on - strand, within CA264_11385at 2638.422 kb on + strand, within CA264_11385at 2638.510 kb on - strandat 2638.510 kb on - strandat 2638.525 kb on - strandat 2638.529 kb on + strandat 2638.530 kb on - strandat 2638.621 kb on - strandat 2638.629 kb on + strandat 2638.630 kb on - strandat 2638.641 kb on + strandat 2638.675 kb on + strandat 2638.675 kb on + strandat 2638.676 kb on - strandat 2638.676 kb on - strandat 2638.676 kb on - strandat 2638.678 kb on + strandat 2638.679 kb on - strandat 2638.700 kb on - strandat 2638.714 kb on - strandat 2638.723 kb on + strandat 2638.724 kb on - strandat 2638.758 kb on - strandat 2638.774 kb on - strandat 2638.777 kb on - strandat 2638.778 kb on + strandat 2638.778 kb on + strandat 2638.779 kb on - strandat 2638.781 kb on - strandat 2638.787 kb on + strandat 2638.787 kb on + strandat 2638.787 kb on + strandat 2638.788 kb on - strandat 2638.826 kb on + strandat 2638.826 kb on + strandat 2638.826 kb on + strandat 2638.826 kb on + strandat 2638.827 kb on - strandat 2638.827 kb on - strandat 2638.827 kb on - strandat 2638.829 kb on + strandat 2638.829 kb on + strandat 2638.830 kb on - strandat 2639.086 kb on - strand, within CA264_11390at 2639.218 kb on + strandat 2639.219 kb on - strandat 2639.313 kb on + strandat 2639.313 kb on + strandat 2639.341 kb on + strandat 2639.342 kb on - strandat 2639.342 kb on - strandat 2639.342 kb on - strandat 2639.346 kb on - strandat 2639.372 kb on + strandat 2639.372 kb on + strandat 2639.382 kb on + strandat 2639.382 kb on + strandat 2639.383 kb on - strandat 2639.383 kb on - strandat 2639.391 kb on - strandat 2639.391 kb on - strandat 2639.391 kb on - strandat 2639.392 kb on + strandat 2639.393 kb on - strandat 2639.408 kb on + strandat 2639.417 kb on - strandat 2639.460 kb on + strandat 2639.461 kb on - strandat 2639.461 kb on - strandat 2639.466 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM
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2,637,213 + CA264_11380 0.66 +1.8
2,637,243 + CA264_11380 0.68 -0.3
2,637,322 + CA264_11380 0.73 +0.0
2,637,337 - CA264_11380 0.74 -0.3
2,637,376 - CA264_11380 0.76 -0.4
2,637,376 - CA264_11380 0.76 +1.6
2,637,384 + CA264_11380 0.77 -0.8
2,637,385 - CA264_11380 0.77 -0.5
2,637,486 + CA264_11380 0.84 -0.2
2,637,543 + CA264_11380 0.87 -0.1
2,637,544 - CA264_11380 0.87 -0.4
2,637,544 - CA264_11380 0.87 -0.6
2,637,549 - CA264_11380 0.88 -0.6
2,637,549 - CA264_11380 0.88 +0.3
2,637,598 - +0.2
2,637,716 + +0.1
2,637,717 - -0.4
2,637,749 + +0.3
2,637,750 - +0.7
2,637,750 - +0.1
2,637,759 + -1.3
2,637,771 + -0.2
2,637,772 - -0.1
2,637,785 - -0.1
2,637,785 - +0.4
2,637,788 + +0.7
2,637,789 - +0.1
2,637,812 - +0.5
2,637,860 + -2.1
2,637,860 + -1.0
2,637,862 + -0.3
2,637,863 - -0.4
2,637,875 + -1.0
2,637,925 + +0.3
2,637,972 + -0.3
2,637,990 + -0.7
2,637,991 - -0.6
2,637,992 + +0.3
2,637,992 + +0.1
2,637,993 - -0.3
2,637,993 - +0.9
2,637,993 - +0.7
2,638,068 + -2.4
2,638,068 + -0.4
2,638,068 + -0.4
2,638,069 - -1.4
2,638,093 + -0.5
2,638,093 + -0.3
2,638,094 - -0.2
2,638,151 - +0.1
2,638,269 - CA264_11385 0.19 +0.5
2,638,324 + CA264_11385 0.36 +0.1
2,638,397 - CA264_11385 0.59 +0.3
2,638,397 - CA264_11385 0.59 -0.1
2,638,397 - CA264_11385 0.59 -1.2
2,638,401 + CA264_11385 0.60 +0.0
2,638,402 - CA264_11385 0.60 -0.5
2,638,402 - CA264_11385 0.60 -0.5
2,638,410 - CA264_11385 0.63 -1.7
2,638,422 + CA264_11385 0.67 -0.0
2,638,510 - -0.5
2,638,510 - -1.4
2,638,525 - -0.2
2,638,529 + -1.2
2,638,530 - -0.7
2,638,621 - -0.1
2,638,629 + -0.2
2,638,630 - -0.6
2,638,641 + +0.6
2,638,675 + +0.8
2,638,675 + -0.6
2,638,676 - +0.2
2,638,676 - +0.2
2,638,676 - +1.6
2,638,678 + +0.4
2,638,679 - +1.3
2,638,700 - +0.5
2,638,714 - -0.4
2,638,723 + +0.8
2,638,724 - -0.3
2,638,758 - -0.3
2,638,774 - +0.1
2,638,777 - +0.0
2,638,778 + +0.7
2,638,778 + +0.5
2,638,779 - +0.5
2,638,781 - +0.1
2,638,787 + -0.6
2,638,787 + -0.5
2,638,787 + +0.4
2,638,788 - -0.2
2,638,826 + -1.9
2,638,826 + -0.4
2,638,826 + -0.2
2,638,826 + -1.8
2,638,827 - +0.8
2,638,827 - -0.5
2,638,827 - -0.4
2,638,829 + -1.5
2,638,829 + -0.2
2,638,830 - -0.2
2,639,086 - CA264_11390 0.64 +0.6
2,639,218 + -0.4
2,639,219 - -0.4
2,639,313 + +0.0
2,639,313 + -0.8
2,639,341 + -1.3
2,639,342 - -0.1
2,639,342 - -0.8
2,639,342 - -0.2
2,639,346 - +0.1
2,639,372 + +0.5
2,639,372 + -0.2
2,639,382 + -0.2
2,639,382 + -0.7
2,639,383 - -1.0
2,639,383 - -0.4
2,639,391 - -1.2
2,639,391 - -0.4
2,639,391 - -1.1
2,639,392 + -0.1
2,639,393 - +1.9
2,639,408 + -0.2
2,639,417 - -0.5
2,639,460 + +0.4
2,639,461 - +0.5
2,639,461 - +0.2
2,639,466 - +0.5

Or see this region's nucleotide sequence