Experiment: m.b. Chlorite 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_10440 and CA264_10445 are separated by 98 nucleotides CA264_10445 and CA264_10450 are separated by 94 nucleotides CA264_10450 and CA264_10455 are separated by 379 nucleotides
CA264_10440: CA264_10440 - LysR family transcriptional regulator, at 2,424,053 to 2,424,946
_10440
CA264_10445: CA264_10445 - hypothetical protein, at 2,425,045 to 2,425,299
_10445
CA264_10450: CA264_10450 - N-acetyltransferase, at 2,425,394 to 2,425,921
_10450
CA264_10455: CA264_10455 - hypothetical protein, at 2,426,301 to 2,426,630
_10455
Position (kb)
2425
2426 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2424.397 kb on + strand, within CA264_10440 at 2424.397 kb on + strand, within CA264_10440 at 2424.466 kb on - strand, within CA264_10440 at 2424.482 kb on + strand, within CA264_10440 at 2424.531 kb on + strand, within CA264_10440 at 2424.532 kb on - strand, within CA264_10440 at 2424.532 kb on - strand, within CA264_10440 at 2424.597 kb on - strand, within CA264_10440 at 2424.723 kb on - strand, within CA264_10440 at 2424.740 kb on + strand, within CA264_10440 at 2424.813 kb on - strand, within CA264_10440 at 2424.929 kb on + strand at 2424.930 kb on - strand at 2424.982 kb on + strand at 2424.996 kb on + strand at 2425.059 kb on + strand at 2425.059 kb on + strand at 2425.059 kb on + strand at 2425.059 kb on + strand at 2425.059 kb on + strand at 2425.060 kb on - strand at 2425.060 kb on - strand at 2425.060 kb on - strand at 2425.063 kb on + strand at 2425.063 kb on + strand at 2425.063 kb on + strand at 2425.065 kb on + strand at 2425.066 kb on - strand at 2425.125 kb on + strand, within CA264_10445 at 2425.126 kb on - strand, within CA264_10445 at 2425.175 kb on + strand, within CA264_10445 at 2425.175 kb on + strand, within CA264_10445 at 2425.266 kb on - strand, within CA264_10445 at 2425.285 kb on + strand at 2425.292 kb on + strand at 2425.292 kb on + strand at 2425.332 kb on + strand at 2425.333 kb on - strand at 2425.336 kb on + strand at 2425.336 kb on + strand at 2425.352 kb on + strand at 2425.366 kb on - strand at 2425.368 kb on + strand at 2425.368 kb on + strand at 2425.368 kb on + strand at 2425.368 kb on + strand at 2425.369 kb on - strand at 2425.369 kb on - strand at 2425.372 kb on - strand at 2425.378 kb on + strand at 2425.378 kb on + strand at 2425.379 kb on - strand at 2425.379 kb on - strand at 2425.410 kb on + strand at 2425.410 kb on + strand at 2425.410 kb on + strand at 2425.411 kb on - strand at 2425.493 kb on - strand, within CA264_10450 at 2425.580 kb on + strand, within CA264_10450 at 2425.614 kb on - strand, within CA264_10450 at 2425.623 kb on + strand, within CA264_10450 at 2425.675 kb on - strand, within CA264_10450 at 2425.685 kb on + strand, within CA264_10450 at 2425.685 kb on + strand, within CA264_10450 at 2425.692 kb on + strand, within CA264_10450 at 2425.714 kb on + strand, within CA264_10450 at 2425.774 kb on + strand, within CA264_10450 at 2425.782 kb on + strand, within CA264_10450 at 2425.888 kb on + strand at 2425.889 kb on - strand at 2425.890 kb on + strand at 2425.890 kb on + strand at 2425.891 kb on - strand at 2425.891 kb on - strand at 2425.970 kb on + strand at 2426.075 kb on + strand at 2426.077 kb on + strand at 2426.086 kb on + strand at 2426.087 kb on - strand at 2426.093 kb on - strand at 2426.153 kb on - strand at 2426.197 kb on + strand at 2426.197 kb on + strand at 2426.210 kb on + strand at 2426.211 kb on - strand at 2426.214 kb on + strand at 2426.214 kb on + strand at 2426.214 kb on + strand at 2426.215 kb on - strand at 2426.221 kb on + strand at 2426.222 kb on - strand at 2426.228 kb on + strand at 2426.229 kb on - strand at 2426.229 kb on - strand at 2426.232 kb on + strand at 2426.232 kb on + strand at 2426.233 kb on - strand at 2426.233 kb on - strand at 2426.293 kb on + strand at 2426.299 kb on + strand at 2426.299 kb on + strand at 2426.303 kb on - strand at 2426.309 kb on - strand at 2426.310 kb on + strand at 2426.310 kb on + strand at 2426.311 kb on - strand at 2426.391 kb on + strand, within CA264_10455 at 2426.392 kb on - strand, within CA264_10455 at 2426.404 kb on - strand, within CA264_10455 at 2426.411 kb on + strand, within CA264_10455 at 2426.460 kb on - strand, within CA264_10455 at 2426.496 kb on - strand, within CA264_10455 at 2426.551 kb on - strand, within CA264_10455 at 2426.574 kb on - strand, within CA264_10455 at 2426.574 kb on - strand, within CA264_10455 at 2426.582 kb on + strand, within CA264_10455 at 2426.583 kb on - strand, within CA264_10455 at 2426.586 kb on + strand, within CA264_10455 at 2426.609 kb on + strand at 2426.622 kb on - strand at 2426.635 kb on + strand at 2426.649 kb on - strand at 2426.713 kb on + strand at 2426.716 kb on - strand at 2426.716 kb on - strand at 2426.734 kb on - strand at 2426.751 kb on - strand at 2426.751 kb on - strand at 2426.751 kb on - strand at 2426.775 kb on + strand at 2426.776 kb on - strand at 2426.777 kb on + strand at 2426.785 kb on - strand at 2426.838 kb on + strand at 2426.841 kb on + strand at 2426.843 kb on + strand at 2426.869 kb on - strand at 2426.891 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM remove 2,424,397 + CA264_10440 0.38 -0.6 2,424,397 + CA264_10440 0.38 +0.5 2,424,466 - CA264_10440 0.46 -1.4 2,424,482 + CA264_10440 0.48 -0.1 2,424,531 + CA264_10440 0.53 +0.3 2,424,532 - CA264_10440 0.54 -0.5 2,424,532 - CA264_10440 0.54 +0.6 2,424,597 - CA264_10440 0.61 +0.4 2,424,723 - CA264_10440 0.75 -1.0 2,424,740 + CA264_10440 0.77 +0.9 2,424,813 - CA264_10440 0.85 +0.1 2,424,929 + -0.8 2,424,930 - +0.1 2,424,982 + -0.2 2,424,996 + -0.5 2,425,059 + -0.1 2,425,059 + +1.8 2,425,059 + -1.2 2,425,059 + +0.2 2,425,059 + -0.5 2,425,060 - -0.2 2,425,060 - -0.2 2,425,060 - +0.7 2,425,063 + -0.5 2,425,063 + -0.2 2,425,063 + -0.5 2,425,065 + +0.1 2,425,066 - +0.2 2,425,125 + CA264_10445 0.31 +0.8 2,425,126 - CA264_10445 0.32 +0.2 2,425,175 + CA264_10445 0.51 -1.0 2,425,175 + CA264_10445 0.51 -0.3 2,425,266 - CA264_10445 0.87 +0.9 2,425,285 + -0.7 2,425,292 + -0.1 2,425,292 + -0.7 2,425,332 + -0.2 2,425,333 - +0.2 2,425,336 + -0.4 2,425,336 + -0.6 2,425,352 + +0.1 2,425,366 - +0.4 2,425,368 + +1.3 2,425,368 + +0.1 2,425,368 + -0.3 2,425,368 + -1.2 2,425,369 - -0.3 2,425,369 - -0.1 2,425,372 - +0.5 2,425,378 + -0.4 2,425,378 + +0.1 2,425,379 - +0.8 2,425,379 - +0.0 2,425,410 + +0.7 2,425,410 + -0.5 2,425,410 + -0.2 2,425,411 - -0.2 2,425,493 - CA264_10450 0.19 -0.6 2,425,580 + CA264_10450 0.35 +0.5 2,425,614 - CA264_10450 0.42 -0.5 2,425,623 + CA264_10450 0.43 +0.3 2,425,675 - CA264_10450 0.53 -1.2 2,425,685 + CA264_10450 0.55 -0.4 2,425,685 + CA264_10450 0.55 -1.2 2,425,692 + CA264_10450 0.56 -0.8 2,425,714 + CA264_10450 0.61 -1.5 2,425,774 + CA264_10450 0.72 -0.1 2,425,782 + CA264_10450 0.73 -0.6 2,425,888 + -0.6 2,425,889 - +0.5 2,425,890 + -0.4 2,425,890 + -0.8 2,425,891 - +2.5 2,425,891 - -0.0 2,425,970 + +0.2 2,426,075 + -0.2 2,426,077 + +0.6 2,426,086 + +0.2 2,426,087 - -0.2 2,426,093 - +0.5 2,426,153 - +0.2 2,426,197 + -0.6 2,426,197 + +0.2 2,426,210 + -0.6 2,426,211 - -0.3 2,426,214 + +0.8 2,426,214 + -2.0 2,426,214 + +0.4 2,426,215 - -0.6 2,426,221 + +0.1 2,426,222 - -0.2 2,426,228 + -0.3 2,426,229 - +0.1 2,426,229 - -0.7 2,426,232 + -0.1 2,426,232 + +1.3 2,426,233 - -0.7 2,426,233 - +0.2 2,426,293 + +0.2 2,426,299 + +1.6 2,426,299 + -1.0 2,426,303 - -0.5 2,426,309 - -1.6 2,426,310 + -0.7 2,426,310 + -0.8 2,426,311 - +1.0 2,426,391 + CA264_10455 0.27 -0.8 2,426,392 - CA264_10455 0.28 -0.2 2,426,404 - CA264_10455 0.31 +1.9 2,426,411 + CA264_10455 0.33 -0.4 2,426,460 - CA264_10455 0.48 +0.0 2,426,496 - CA264_10455 0.59 -1.7 2,426,551 - CA264_10455 0.76 -0.4 2,426,574 - CA264_10455 0.83 +1.2 2,426,574 - CA264_10455 0.83 +0.3 2,426,582 + CA264_10455 0.85 -0.5 2,426,583 - CA264_10455 0.85 +0.9 2,426,586 + CA264_10455 0.86 +0.0 2,426,609 + +0.1 2,426,622 - +1.1 2,426,635 + -2.5 2,426,649 - -1.6 2,426,713 + +1.2 2,426,716 - -0.1 2,426,716 - -0.4 2,426,734 - -0.3 2,426,751 - +0.2 2,426,751 - +0.6 2,426,751 - +1.2 2,426,775 + -0.5 2,426,776 - +0.3 2,426,777 + +0.4 2,426,785 - -0.2 2,426,838 + +0.1 2,426,841 + -0.5 2,426,843 + +0.8 2,426,869 - -1.2 2,426,891 - +1.0
Or see this region's nucleotide sequence