Experiment: m.b. Chlorite 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09045 and CA264_09050 are separated by 22 nucleotides CA264_09050 and CA264_09055 are separated by 751 nucleotides
CA264_09045: CA264_09045 - SusC/RagA family protein, at 2,114,955 to 2,118,245
_09045
CA264_09050: CA264_09050 - hypothetical protein, at 2,118,268 to 2,119,308
_09050
CA264_09055: CA264_09055 - PAS domain-containing sensor histidine kinase, at 2,120,060 to 2,122,249
_09055
Position (kb)
2118
2119
2120 Strain fitness (log2 ratio)
-1
0
1 at 2117.466 kb on - strand, within CA264_09045 at 2117.674 kb on + strand, within CA264_09045 at 2117.678 kb on + strand, within CA264_09045 at 2117.715 kb on - strand, within CA264_09045 at 2117.788 kb on - strand, within CA264_09045 at 2117.905 kb on + strand, within CA264_09045 at 2117.905 kb on + strand, within CA264_09045 at 2117.905 kb on + strand, within CA264_09045 at 2117.905 kb on + strand, within CA264_09045 at 2117.906 kb on - strand, within CA264_09045 at 2117.916 kb on + strand, within CA264_09045 at 2117.924 kb on + strand at 2117.925 kb on - strand at 2117.925 kb on - strand at 2118.055 kb on + strand at 2118.056 kb on - strand at 2118.056 kb on - strand at 2118.114 kb on + strand at 2118.117 kb on + strand at 2118.155 kb on - strand at 2118.155 kb on - strand at 2118.258 kb on - strand at 2118.374 kb on + strand, within CA264_09050 at 2118.382 kb on - strand, within CA264_09050 at 2118.432 kb on - strand, within CA264_09050 at 2118.643 kb on + strand, within CA264_09050 at 2118.669 kb on + strand, within CA264_09050 at 2118.700 kb on + strand, within CA264_09050 at 2118.750 kb on + strand, within CA264_09050 at 2118.913 kb on + strand, within CA264_09050 at 2119.064 kb on + strand, within CA264_09050 at 2119.064 kb on + strand, within CA264_09050 at 2119.064 kb on - strand, within CA264_09050 at 2119.172 kb on - strand, within CA264_09050 at 2119.206 kb on - strand at 2119.296 kb on - strand at 2119.327 kb on - strand at 2119.340 kb on + strand at 2119.361 kb on + strand at 2119.363 kb on + strand at 2119.364 kb on - strand at 2119.485 kb on + strand at 2119.506 kb on - strand at 2119.571 kb on - strand at 2119.571 kb on - strand at 2119.592 kb on + strand at 2119.619 kb on + strand at 2119.622 kb on - strand at 2119.722 kb on - strand at 2119.838 kb on - strand at 2119.846 kb on - strand at 2119.846 kb on - strand at 2119.853 kb on + strand at 2119.854 kb on - strand at 2119.898 kb on + strand at 2119.920 kb on - strand at 2119.926 kb on - strand at 2119.931 kb on - strand at 2119.936 kb on + strand at 2119.937 kb on - strand at 2119.944 kb on - strand at 2119.944 kb on - strand at 2119.949 kb on - strand at 2119.955 kb on + strand at 2119.955 kb on + strand at 2119.967 kb on + strand at 2119.992 kb on - strand at 2120.019 kb on - strand at 2120.019 kb on - strand at 2120.021 kb on + strand at 2120.023 kb on + strand at 2120.023 kb on + strand at 2120.023 kb on + strand at 2120.023 kb on + strand at 2120.024 kb on - strand at 2120.024 kb on - strand at 2120.024 kb on - strand at 2120.053 kb on + strand at 2120.053 kb on + strand at 2120.054 kb on - strand at 2120.055 kb on + strand at 2120.055 kb on + strand at 2120.055 kb on + strand at 2120.055 kb on + strand at 2120.055 kb on + strand at 2120.055 kb on + strand at 2120.059 kb on + strand at 2120.059 kb on + strand at 2120.060 kb on - strand at 2120.060 kb on - strand at 2120.077 kb on - strand at 2120.224 kb on + strand at 2120.224 kb on + strand at 2120.224 kb on + strand at 2120.226 kb on + strand at 2120.226 kb on + strand at 2120.251 kb on - strand at 2120.251 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM remove 2,117,466 - CA264_09045 0.76 +1.3 2,117,674 + CA264_09045 0.83 -0.5 2,117,678 + CA264_09045 0.83 -0.4 2,117,715 - CA264_09045 0.84 +0.3 2,117,788 - CA264_09045 0.86 -1.3 2,117,905 + CA264_09045 0.90 -0.4 2,117,905 + CA264_09045 0.90 +1.0 2,117,905 + CA264_09045 0.90 -0.2 2,117,905 + CA264_09045 0.90 -1.1 2,117,906 - CA264_09045 0.90 +0.8 2,117,916 + CA264_09045 0.90 -1.7 2,117,924 + +0.3 2,117,925 - -1.5 2,117,925 - -0.7 2,118,055 + +0.4 2,118,056 - -0.3 2,118,056 - -0.0 2,118,114 + +0.5 2,118,117 + +0.0 2,118,155 - -1.0 2,118,155 - -0.7 2,118,258 - -0.4 2,118,374 + CA264_09050 0.10 -0.3 2,118,382 - CA264_09050 0.11 +0.4 2,118,432 - CA264_09050 0.16 +0.4 2,118,643 + CA264_09050 0.36 -0.3 2,118,669 + CA264_09050 0.39 +1.6 2,118,700 + CA264_09050 0.41 -0.4 2,118,750 + CA264_09050 0.46 +0.4 2,118,913 + CA264_09050 0.62 +0.2 2,119,064 + CA264_09050 0.76 +0.8 2,119,064 + CA264_09050 0.76 -0.6 2,119,064 - CA264_09050 0.76 +1.1 2,119,172 - CA264_09050 0.87 +1.1 2,119,206 - +0.1 2,119,296 - +1.3 2,119,327 - +0.1 2,119,340 + -0.4 2,119,361 + -1.0 2,119,363 + -0.2 2,119,364 - +0.6 2,119,485 + +0.2 2,119,506 - +0.2 2,119,571 - -1.3 2,119,571 - +0.2 2,119,592 + -0.4 2,119,619 + +0.2 2,119,622 - +0.2 2,119,722 - -0.2 2,119,838 - -0.3 2,119,846 - -0.8 2,119,846 - +0.2 2,119,853 + -0.4 2,119,854 - -0.1 2,119,898 + -0.8 2,119,920 - +0.9 2,119,926 - +0.3 2,119,931 - -1.6 2,119,936 + +0.6 2,119,937 - +0.2 2,119,944 - -0.7 2,119,944 - -0.4 2,119,949 - -0.2 2,119,955 + -0.7 2,119,955 + -0.8 2,119,967 + +0.1 2,119,992 - -0.3 2,120,019 - +0.8 2,120,019 - -0.7 2,120,021 + +0.1 2,120,023 + +0.3 2,120,023 + -0.8 2,120,023 + -0.6 2,120,023 + -0.1 2,120,024 - +0.5 2,120,024 - +1.2 2,120,024 - -1.2 2,120,053 + +0.2 2,120,053 + -0.0 2,120,054 - -1.7 2,120,055 + -0.1 2,120,055 + +0.6 2,120,055 + -1.2 2,120,055 + -0.5 2,120,055 + +0.6 2,120,055 + -0.6 2,120,059 + +0.4 2,120,059 + +0.2 2,120,060 - -0.0 2,120,060 - +0.4 2,120,077 - -0.2 2,120,224 + -0.3 2,120,224 + +0.1 2,120,224 + -0.5 2,120,226 + -1.6 2,120,226 + -0.5 2,120,251 - -0.7 2,120,251 - -0.1
Or see this region's nucleotide sequence