Experiment: m.b. Chlorite 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_08875 and CA264_08880 are separated by 124 nucleotides CA264_08880 and CA264_08885 are separated by 1 nucleotides CA264_08885 and CA264_08890 overlap by 34 nucleotides CA264_08890 and CA264_08895 are separated by 8 nucleotides
CA264_08875: CA264_08875 - urocanate hydratase, at 2,072,468 to 2,074,171
_08875
CA264_08880: CA264_08880 - SAM-dependent methyltransferase, at 2,074,296 to 2,074,919
_08880
CA264_08885: CA264_08885 - hypothetical protein, at 2,074,921 to 2,075,862
_08885
CA264_08890: CA264_08890 - hypothetical protein, at 2,075,829 to 2,076,461
_08890
CA264_08895: CA264_08895 - hypothetical protein, at 2,076,470 to 2,076,946
_08895
Position (kb)
2074
2075
2076 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2073.972 kb on + strand, within CA264_08875 at 2074.030 kb on + strand at 2074.031 kb on - strand at 2074.092 kb on + strand at 2074.092 kb on + strand at 2074.092 kb on + strand at 2074.147 kb on + strand at 2074.147 kb on + strand at 2074.148 kb on - strand at 2074.148 kb on - strand at 2074.171 kb on + strand at 2074.171 kb on + strand at 2074.172 kb on - strand at 2074.172 kb on - strand at 2074.172 kb on - strand at 2074.175 kb on + strand at 2074.188 kb on - strand at 2074.192 kb on + strand at 2074.192 kb on + strand at 2074.232 kb on + strand at 2074.244 kb on + strand at 2074.245 kb on - strand at 2074.283 kb on + strand at 2074.394 kb on - strand, within CA264_08880 at 2074.432 kb on + strand, within CA264_08880 at 2074.433 kb on - strand, within CA264_08880 at 2074.437 kb on + strand, within CA264_08880 at 2074.438 kb on - strand, within CA264_08880 at 2074.492 kb on + strand, within CA264_08880 at 2074.522 kb on + strand, within CA264_08880 at 2074.552 kb on + strand, within CA264_08880 at 2074.552 kb on + strand, within CA264_08880 at 2074.553 kb on - strand, within CA264_08880 at 2074.681 kb on + strand, within CA264_08880 at 2074.764 kb on + strand, within CA264_08880 at 2074.918 kb on - strand at 2074.922 kb on + strand at 2075.000 kb on + strand at 2075.049 kb on - strand, within CA264_08885 at 2075.090 kb on - strand, within CA264_08885 at 2075.134 kb on - strand, within CA264_08885 at 2075.134 kb on - strand, within CA264_08885 at 2075.220 kb on + strand, within CA264_08885 at 2075.221 kb on - strand, within CA264_08885 at 2075.299 kb on + strand, within CA264_08885 at 2075.299 kb on + strand, within CA264_08885 at 2075.373 kb on + strand, within CA264_08885 at 2075.374 kb on - strand, within CA264_08885 at 2075.395 kb on + strand, within CA264_08885 at 2075.396 kb on - strand, within CA264_08885 at 2075.420 kb on + strand, within CA264_08885 at 2075.421 kb on - strand, within CA264_08885 at 2075.444 kb on - strand, within CA264_08885 at 2075.458 kb on - strand, within CA264_08885 at 2075.545 kb on + strand, within CA264_08885 at 2075.545 kb on + strand, within CA264_08885 at 2075.546 kb on - strand, within CA264_08885 at 2075.562 kb on + strand, within CA264_08885 at 2075.563 kb on - strand, within CA264_08885 at 2075.563 kb on - strand, within CA264_08885 at 2075.567 kb on + strand, within CA264_08885 at 2075.568 kb on - strand, within CA264_08885 at 2075.583 kb on + strand, within CA264_08885 at 2075.584 kb on - strand, within CA264_08885 at 2075.681 kb on + strand, within CA264_08885 at 2075.682 kb on - strand, within CA264_08885 at 2075.759 kb on - strand, within CA264_08885 at 2075.794 kb on - strand at 2075.794 kb on - strand at 2075.794 kb on - strand at 2075.862 kb on + strand at 2075.862 kb on + strand at 2075.905 kb on + strand, within CA264_08890 at 2076.036 kb on + strand, within CA264_08890 at 2076.037 kb on - strand, within CA264_08890 at 2076.100 kb on + strand, within CA264_08890 at 2076.131 kb on + strand, within CA264_08890 at 2076.195 kb on - strand, within CA264_08890 at 2076.220 kb on + strand, within CA264_08890 at 2076.220 kb on + strand, within CA264_08890 at 2076.221 kb on - strand, within CA264_08890 at 2076.221 kb on - strand, within CA264_08890 at 2076.286 kb on + strand, within CA264_08890 at 2076.286 kb on + strand, within CA264_08890 at 2076.287 kb on - strand, within CA264_08890 at 2076.288 kb on + strand, within CA264_08890 at 2076.289 kb on - strand, within CA264_08890 at 2076.492 kb on + strand at 2076.493 kb on - strand at 2076.493 kb on - strand at 2076.493 kb on - strand at 2076.544 kb on + strand, within CA264_08895 at 2076.545 kb on - strand, within CA264_08895 at 2076.545 kb on - strand, within CA264_08895 at 2076.545 kb on - strand, within CA264_08895 at 2076.579 kb on - strand, within CA264_08895 at 2076.579 kb on - strand, within CA264_08895 at 2076.597 kb on + strand, within CA264_08895 at 2076.598 kb on - strand, within CA264_08895 at 2076.858 kb on + strand, within CA264_08895 at 2076.859 kb on - strand, within CA264_08895 at 2076.861 kb on + strand, within CA264_08895
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM remove 2,073,972 + CA264_08875 0.88 -0.0 2,074,030 + +0.6 2,074,031 - -0.6 2,074,092 + -0.2 2,074,092 + +0.1 2,074,092 + -0.4 2,074,147 + -0.3 2,074,147 + -1.3 2,074,148 - +0.1 2,074,148 - -0.2 2,074,171 + -0.3 2,074,171 + -1.2 2,074,172 - -0.9 2,074,172 - -0.5 2,074,172 - -0.9 2,074,175 + -0.4 2,074,188 - -1.5 2,074,192 + -0.4 2,074,192 + -0.2 2,074,232 + -0.3 2,074,244 + -2.0 2,074,245 - -1.1 2,074,283 + -0.7 2,074,394 - CA264_08880 0.16 -0.9 2,074,432 + CA264_08880 0.22 +0.2 2,074,433 - CA264_08880 0.22 -0.6 2,074,437 + CA264_08880 0.23 -0.1 2,074,438 - CA264_08880 0.23 -1.8 2,074,492 + CA264_08880 0.31 -1.0 2,074,522 + CA264_08880 0.36 -2.0 2,074,552 + CA264_08880 0.41 -1.2 2,074,552 + CA264_08880 0.41 -0.4 2,074,553 - CA264_08880 0.41 -1.2 2,074,681 + CA264_08880 0.62 +0.1 2,074,764 + CA264_08880 0.75 -0.2 2,074,918 - -0.8 2,074,922 + -0.3 2,075,000 + -0.3 2,075,049 - CA264_08885 0.14 +0.3 2,075,090 - CA264_08885 0.18 -0.2 2,075,134 - CA264_08885 0.23 -0.3 2,075,134 - CA264_08885 0.23 +1.0 2,075,220 + CA264_08885 0.32 -0.4 2,075,221 - CA264_08885 0.32 -0.5 2,075,299 + CA264_08885 0.40 +1.1 2,075,299 + CA264_08885 0.40 -0.3 2,075,373 + CA264_08885 0.48 -0.6 2,075,374 - CA264_08885 0.48 -1.3 2,075,395 + CA264_08885 0.50 +0.4 2,075,396 - CA264_08885 0.50 +0.6 2,075,420 + CA264_08885 0.53 +0.1 2,075,421 - CA264_08885 0.53 -0.9 2,075,444 - CA264_08885 0.56 -0.8 2,075,458 - CA264_08885 0.57 -0.6 2,075,545 + CA264_08885 0.66 -0.2 2,075,545 + CA264_08885 0.66 -0.1 2,075,546 - CA264_08885 0.66 +0.0 2,075,562 + CA264_08885 0.68 -0.5 2,075,563 - CA264_08885 0.68 -0.4 2,075,563 - CA264_08885 0.68 -1.8 2,075,567 + CA264_08885 0.69 +0.5 2,075,568 - CA264_08885 0.69 -0.4 2,075,583 + CA264_08885 0.70 +0.4 2,075,584 - CA264_08885 0.70 +1.8 2,075,681 + CA264_08885 0.81 +0.2 2,075,682 - CA264_08885 0.81 -0.8 2,075,759 - CA264_08885 0.89 +0.5 2,075,794 - -1.5 2,075,794 - +1.1 2,075,794 - -0.2 2,075,862 + -0.6 2,075,862 + -0.5 2,075,905 + CA264_08890 0.12 -0.4 2,076,036 + CA264_08890 0.33 -0.3 2,076,037 - CA264_08890 0.33 -0.1 2,076,100 + CA264_08890 0.43 -0.3 2,076,131 + CA264_08890 0.48 +1.2 2,076,195 - CA264_08890 0.58 -0.6 2,076,220 + CA264_08890 0.62 -0.4 2,076,220 + CA264_08890 0.62 -0.0 2,076,221 - CA264_08890 0.62 -1.3 2,076,221 - CA264_08890 0.62 +0.5 2,076,286 + CA264_08890 0.72 -1.0 2,076,286 + CA264_08890 0.72 -0.4 2,076,287 - CA264_08890 0.72 -0.2 2,076,288 + CA264_08890 0.73 -0.3 2,076,289 - CA264_08890 0.73 +0.7 2,076,492 + -0.3 2,076,493 - +0.0 2,076,493 - -0.4 2,076,493 - -1.6 2,076,544 + CA264_08895 0.16 -0.3 2,076,545 - CA264_08895 0.16 -0.2 2,076,545 - CA264_08895 0.16 +0.2 2,076,545 - CA264_08895 0.16 +0.8 2,076,579 - CA264_08895 0.23 -0.1 2,076,579 - CA264_08895 0.23 -0.5 2,076,597 + CA264_08895 0.27 -0.2 2,076,598 - CA264_08895 0.27 +0.4 2,076,858 + CA264_08895 0.81 +0.7 2,076,859 - CA264_08895 0.82 -1.3 2,076,861 + CA264_08895 0.82 +0.8
Or see this region's nucleotide sequence