Experiment: m.b. Chlorite 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07855 and CA264_07860 are separated by 87 nucleotides CA264_07860 and CA264_07865 are separated by 226 nucleotides CA264_07865 and CA264_07870 are separated by 176 nucleotides
CA264_07855: CA264_07855 - ribonuclease BN, at 1,819,202 to 1,820,110
_07855
CA264_07860: CA264_07860 - SAM-dependent methyltransferase, at 1,820,198 to 1,820,911
_07860
CA264_07865: CA264_07865 - hypothetical protein, at 1,821,138 to 1,821,671
_07865
CA264_07870: CA264_07870 - LysR family transcriptional regulator, at 1,821,848 to 1,822,756
_07870
Position (kb)
1820
1821 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1819.199 kb on - strand at 1819.232 kb on + strand at 1819.295 kb on - strand, within CA264_07855 at 1819.319 kb on - strand, within CA264_07855 at 1819.321 kb on + strand, within CA264_07855 at 1819.322 kb on - strand, within CA264_07855 at 1819.329 kb on + strand, within CA264_07855 at 1819.329 kb on + strand, within CA264_07855 at 1819.330 kb on - strand, within CA264_07855 at 1819.330 kb on - strand, within CA264_07855 at 1819.330 kb on - strand, within CA264_07855 at 1819.330 kb on - strand, within CA264_07855 at 1819.332 kb on + strand, within CA264_07855 at 1819.333 kb on - strand, within CA264_07855 at 1819.374 kb on + strand, within CA264_07855 at 1819.374 kb on + strand, within CA264_07855 at 1819.374 kb on + strand, within CA264_07855 at 1819.375 kb on - strand, within CA264_07855 at 1819.405 kb on - strand, within CA264_07855 at 1819.405 kb on - strand, within CA264_07855 at 1819.419 kb on + strand, within CA264_07855 at 1819.419 kb on + strand, within CA264_07855 at 1819.573 kb on - strand, within CA264_07855 at 1819.713 kb on - strand, within CA264_07855 at 1819.817 kb on + strand, within CA264_07855 at 1819.817 kb on + strand, within CA264_07855 at 1819.818 kb on - strand, within CA264_07855 at 1819.898 kb on + strand, within CA264_07855 at 1819.898 kb on + strand, within CA264_07855 at 1819.899 kb on - strand, within CA264_07855 at 1819.899 kb on - strand, within CA264_07855 at 1820.031 kb on + strand at 1820.032 kb on - strand at 1820.063 kb on - strand at 1820.152 kb on - strand at 1820.153 kb on + strand at 1820.161 kb on - strand at 1820.166 kb on + strand at 1820.189 kb on - strand at 1820.281 kb on - strand, within CA264_07860 at 1820.343 kb on + strand, within CA264_07860 at 1820.344 kb on - strand, within CA264_07860 at 1820.344 kb on - strand, within CA264_07860 at 1820.353 kb on + strand, within CA264_07860 at 1820.354 kb on - strand, within CA264_07860 at 1820.354 kb on - strand, within CA264_07860 at 1820.356 kb on - strand, within CA264_07860 at 1820.418 kb on + strand, within CA264_07860 at 1820.419 kb on - strand, within CA264_07860 at 1820.424 kb on + strand, within CA264_07860 at 1820.424 kb on + strand, within CA264_07860 at 1820.424 kb on + strand, within CA264_07860 at 1820.424 kb on + strand, within CA264_07860 at 1820.424 kb on + strand, within CA264_07860 at 1820.425 kb on - strand, within CA264_07860 at 1820.429 kb on + strand, within CA264_07860 at 1820.429 kb on + strand, within CA264_07860 at 1820.429 kb on + strand, within CA264_07860 at 1820.430 kb on - strand, within CA264_07860 at 1820.554 kb on + strand, within CA264_07860 at 1820.714 kb on + strand, within CA264_07860 at 1820.908 kb on - strand at 1820.966 kb on + strand at 1820.970 kb on + strand at 1820.970 kb on + strand at 1820.970 kb on + strand at 1820.972 kb on + strand at 1820.973 kb on - strand at 1821.004 kb on - strand at 1821.040 kb on - strand at 1821.048 kb on + strand at 1821.053 kb on + strand at 1821.053 kb on + strand at 1821.054 kb on - strand at 1821.055 kb on + strand at 1821.057 kb on + strand at 1821.078 kb on + strand at 1821.082 kb on + strand at 1821.121 kb on - strand at 1821.122 kb on + strand at 1821.122 kb on + strand at 1821.162 kb on + strand at 1821.162 kb on + strand at 1821.163 kb on - strand at 1821.261 kb on - strand, within CA264_07865 at 1821.262 kb on + strand, within CA264_07865 at 1821.263 kb on - strand, within CA264_07865 at 1821.263 kb on - strand, within CA264_07865 at 1821.313 kb on - strand, within CA264_07865 at 1821.313 kb on - strand, within CA264_07865 at 1821.316 kb on + strand, within CA264_07865 at 1821.317 kb on - strand, within CA264_07865 at 1821.317 kb on - strand, within CA264_07865 at 1821.317 kb on - strand, within CA264_07865 at 1821.356 kb on + strand, within CA264_07865 at 1821.383 kb on + strand, within CA264_07865 at 1821.417 kb on + strand, within CA264_07865 at 1821.417 kb on + strand, within CA264_07865 at 1821.419 kb on + strand, within CA264_07865 at 1821.420 kb on - strand, within CA264_07865 at 1821.454 kb on - strand, within CA264_07865 at 1821.464 kb on - strand, within CA264_07865 at 1821.567 kb on + strand, within CA264_07865 at 1821.567 kb on + strand, within CA264_07865 at 1821.568 kb on - strand, within CA264_07865 at 1821.568 kb on - strand, within CA264_07865 at 1821.669 kb on + strand at 1821.669 kb on + strand at 1821.695 kb on - strand at 1821.717 kb on + strand at 1821.724 kb on + strand at 1821.756 kb on - strand at 1821.756 kb on - strand at 1821.767 kb on + strand at 1821.835 kb on - strand at 1821.883 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM remove 1,819,199 - -0.1 1,819,232 + +0.1 1,819,295 - CA264_07855 0.10 -1.3 1,819,319 - CA264_07855 0.13 +0.7 1,819,321 + CA264_07855 0.13 +0.5 1,819,322 - CA264_07855 0.13 -0.2 1,819,329 + CA264_07855 0.14 -1.0 1,819,329 + CA264_07855 0.14 -0.1 1,819,330 - CA264_07855 0.14 -2.3 1,819,330 - CA264_07855 0.14 -1.0 1,819,330 - CA264_07855 0.14 -0.9 1,819,330 - CA264_07855 0.14 +0.1 1,819,332 + CA264_07855 0.14 -0.3 1,819,333 - CA264_07855 0.14 -0.0 1,819,374 + CA264_07855 0.19 -0.6 1,819,374 + CA264_07855 0.19 -0.4 1,819,374 + CA264_07855 0.19 +0.6 1,819,375 - CA264_07855 0.19 +0.2 1,819,405 - CA264_07855 0.22 -0.1 1,819,405 - CA264_07855 0.22 +0.7 1,819,419 + CA264_07855 0.24 -0.3 1,819,419 + CA264_07855 0.24 +1.3 1,819,573 - CA264_07855 0.41 +0.5 1,819,713 - CA264_07855 0.56 +0.4 1,819,817 + CA264_07855 0.68 +0.1 1,819,817 + CA264_07855 0.68 -0.1 1,819,818 - CA264_07855 0.68 -0.4 1,819,898 + CA264_07855 0.77 -0.3 1,819,898 + CA264_07855 0.77 +0.2 1,819,899 - CA264_07855 0.77 +0.9 1,819,899 - CA264_07855 0.77 -0.1 1,820,031 + -0.0 1,820,032 - -0.5 1,820,063 - -1.7 1,820,152 - -0.0 1,820,153 + -0.5 1,820,161 - -0.9 1,820,166 + -0.0 1,820,189 - +0.6 1,820,281 - CA264_07860 0.12 -0.5 1,820,343 + CA264_07860 0.20 +2.3 1,820,344 - CA264_07860 0.20 -0.5 1,820,344 - CA264_07860 0.20 +0.2 1,820,353 + CA264_07860 0.22 -2.2 1,820,354 - CA264_07860 0.22 -0.9 1,820,354 - CA264_07860 0.22 -0.5 1,820,356 - CA264_07860 0.22 +1.5 1,820,418 + CA264_07860 0.31 -0.3 1,820,419 - CA264_07860 0.31 +0.8 1,820,424 + CA264_07860 0.32 +0.3 1,820,424 + CA264_07860 0.32 +0.0 1,820,424 + CA264_07860 0.32 +0.3 1,820,424 + CA264_07860 0.32 +0.7 1,820,424 + CA264_07860 0.32 +2.3 1,820,425 - CA264_07860 0.32 +0.7 1,820,429 + CA264_07860 0.32 +0.0 1,820,429 + CA264_07860 0.32 +0.3 1,820,429 + CA264_07860 0.32 -0.1 1,820,430 - CA264_07860 0.32 +0.4 1,820,554 + CA264_07860 0.50 -0.5 1,820,714 + CA264_07860 0.72 -0.7 1,820,908 - -1.2 1,820,966 + -0.2 1,820,970 + -1.7 1,820,970 + -2.3 1,820,970 + +0.3 1,820,972 + -1.0 1,820,973 - -0.0 1,821,004 - +0.3 1,821,040 - -0.2 1,821,048 + +1.3 1,821,053 + -1.0 1,821,053 + +1.2 1,821,054 - -0.3 1,821,055 + +1.1 1,821,057 + -1.5 1,821,078 + +0.4 1,821,082 + +0.4 1,821,121 - +0.9 1,821,122 + -1.1 1,821,122 + -0.4 1,821,162 + -0.2 1,821,162 + +0.1 1,821,163 - +0.2 1,821,261 - CA264_07865 0.23 +1.7 1,821,262 + CA264_07865 0.23 +0.9 1,821,263 - CA264_07865 0.23 -0.3 1,821,263 - CA264_07865 0.23 +0.2 1,821,313 - CA264_07865 0.33 +1.2 1,821,313 - CA264_07865 0.33 -1.0 1,821,316 + CA264_07865 0.33 -2.0 1,821,317 - CA264_07865 0.34 +0.3 1,821,317 - CA264_07865 0.34 +0.3 1,821,317 - CA264_07865 0.34 +0.1 1,821,356 + CA264_07865 0.41 -0.8 1,821,383 + CA264_07865 0.46 -0.4 1,821,417 + CA264_07865 0.52 -0.0 1,821,417 + CA264_07865 0.52 +0.3 1,821,419 + CA264_07865 0.53 +0.2 1,821,420 - CA264_07865 0.53 -0.0 1,821,454 - CA264_07865 0.59 +1.0 1,821,464 - CA264_07865 0.61 -0.1 1,821,567 + CA264_07865 0.80 +0.2 1,821,567 + CA264_07865 0.80 -0.5 1,821,568 - CA264_07865 0.81 +0.7 1,821,568 - CA264_07865 0.81 -0.2 1,821,669 + -0.3 1,821,669 + +1.0 1,821,695 - -0.7 1,821,717 + -0.5 1,821,724 + +0.0 1,821,756 - -0.1 1,821,756 - -0.7 1,821,767 + +0.2 1,821,835 - +1.0 1,821,883 - -0.0
Or see this region's nucleotide sequence