Experiment: m.b. Chlorite 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07685 and CA264_07690 overlap by 23 nucleotides CA264_07690 and CA264_07695 are separated by 31 nucleotides CA264_07695 and CA264_07700 are separated by 103 nucleotides CA264_07700 and CA264_07705 are separated by 78 nucleotides CA264_07705 and CA264_07710 are separated by 338 nucleotides
CA264_07685: CA264_07685 - aminotransferase class I and II, at 1,783,016 to 1,783,816
_07685
CA264_07690: CA264_07690 - hypothetical protein, at 1,783,794 to 1,784,177
_07690
CA264_07695: CA264_07695 - thioesterase, at 1,784,209 to 1,784,616
_07695
CA264_07700: CA264_07700 - hypothetical protein, at 1,784,720 to 1,784,923
_07700
CA264_07705: CA264_07705 - hypothetical protein, at 1,785,002 to 1,785,199
_07705
CA264_07710: CA264_07710 - SusC/RagA family TonB-linked outer membrane protein, at 1,785,538 to 1,788,660
_07710
Position (kb)
1784
1785 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1783.366 kb on - strand, within CA264_07685 at 1783.374 kb on + strand, within CA264_07685 at 1783.733 kb on + strand, within CA264_07685 at 1783.734 kb on - strand, within CA264_07685 at 1783.766 kb on - strand at 1783.773 kb on + strand at 1783.777 kb on + strand at 1783.777 kb on + strand at 1783.811 kb on - strand at 1784.176 kb on - strand at 1784.216 kb on + strand at 1784.216 kb on + strand at 1784.217 kb on - strand at 1784.228 kb on + strand at 1784.228 kb on + strand at 1784.228 kb on + strand at 1784.229 kb on - strand at 1784.229 kb on - strand at 1784.388 kb on - strand, within CA264_07695 at 1784.390 kb on - strand, within CA264_07695 at 1784.400 kb on - strand, within CA264_07695 at 1784.400 kb on - strand, within CA264_07695 at 1784.400 kb on - strand, within CA264_07695 at 1784.445 kb on + strand, within CA264_07695 at 1784.542 kb on - strand, within CA264_07695 at 1784.549 kb on - strand, within CA264_07695 at 1784.594 kb on - strand at 1784.615 kb on - strand at 1784.627 kb on + strand at 1784.640 kb on + strand at 1784.715 kb on - strand at 1784.715 kb on - strand at 1784.775 kb on + strand, within CA264_07700 at 1784.775 kb on + strand, within CA264_07700 at 1784.775 kb on + strand, within CA264_07700 at 1784.775 kb on + strand, within CA264_07700 at 1784.792 kb on + strand, within CA264_07700 at 1784.792 kb on + strand, within CA264_07700 at 1784.799 kb on + strand, within CA264_07700 at 1784.799 kb on + strand, within CA264_07700 at 1784.800 kb on - strand, within CA264_07700 at 1784.827 kb on - strand, within CA264_07700 at 1784.827 kb on - strand, within CA264_07700 at 1784.827 kb on - strand, within CA264_07700 at 1784.849 kb on - strand, within CA264_07700 at 1784.892 kb on + strand, within CA264_07700 at 1784.893 kb on - strand, within CA264_07700 at 1784.898 kb on + strand, within CA264_07700 at 1784.898 kb on + strand, within CA264_07700 at 1784.898 kb on + strand, within CA264_07700 at 1784.898 kb on + strand, within CA264_07700 at 1784.898 kb on + strand, within CA264_07700 at 1784.898 kb on + strand, within CA264_07700 at 1784.899 kb on - strand, within CA264_07700 at 1784.899 kb on - strand, within CA264_07700 at 1784.899 kb on - strand, within CA264_07700 at 1784.899 kb on - strand, within CA264_07700 at 1784.899 kb on - strand, within CA264_07700 at 1784.903 kb on - strand at 1784.904 kb on + strand at 1784.905 kb on - strand at 1784.919 kb on + strand at 1784.919 kb on + strand at 1784.920 kb on - strand at 1784.927 kb on + strand at 1784.928 kb on - strand at 1784.947 kb on + strand at 1784.947 kb on + strand at 1784.948 kb on - strand at 1784.948 kb on - strand at 1784.960 kb on + strand at 1784.961 kb on - strand at 1784.961 kb on - strand at 1784.965 kb on + strand at 1784.966 kb on - strand at 1784.966 kb on - strand at 1785.012 kb on + strand at 1785.013 kb on - strand at 1785.077 kb on - strand, within CA264_07705 at 1785.141 kb on - strand, within CA264_07705 at 1785.141 kb on - strand, within CA264_07705 at 1785.141 kb on - strand, within CA264_07705 at 1785.143 kb on - strand, within CA264_07705 at 1785.229 kb on - strand at 1785.244 kb on - strand at 1785.244 kb on - strand at 1785.261 kb on - strand at 1785.276 kb on + strand at 1785.280 kb on + strand at 1785.280 kb on + strand at 1785.291 kb on - strand at 1785.323 kb on + strand at 1785.324 kb on - strand at 1785.363 kb on + strand at 1785.363 kb on + strand at 1785.363 kb on + strand at 1785.384 kb on + strand at 1785.385 kb on - strand at 1785.385 kb on - strand at 1785.431 kb on + strand at 1785.431 kb on + strand at 1785.431 kb on + strand at 1785.432 kb on - strand at 1785.485 kb on - strand at 1785.502 kb on + strand at 1785.502 kb on + strand at 1785.502 kb on + strand at 1785.503 kb on - strand at 1785.503 kb on - strand at 1785.507 kb on - strand at 1785.520 kb on + strand at 1785.521 kb on - strand at 1785.534 kb on + strand at 1785.537 kb on + strand at 1785.558 kb on - strand at 1785.579 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM remove 1,783,366 - CA264_07685 0.44 -0.0 1,783,374 + CA264_07685 0.45 -0.5 1,783,733 + CA264_07685 0.90 +0.2 1,783,734 - CA264_07685 0.90 -0.2 1,783,766 - +1.3 1,783,773 + +1.3 1,783,777 + +0.9 1,783,777 + +0.6 1,783,811 - -0.2 1,784,176 - +0.0 1,784,216 + +1.3 1,784,216 + +0.4 1,784,217 - -0.7 1,784,228 + -0.3 1,784,228 + -0.1 1,784,228 + +1.5 1,784,229 - -0.1 1,784,229 - -0.3 1,784,388 - CA264_07695 0.44 -0.2 1,784,390 - CA264_07695 0.44 +0.5 1,784,400 - CA264_07695 0.47 +0.8 1,784,400 - CA264_07695 0.47 +0.2 1,784,400 - CA264_07695 0.47 +1.1 1,784,445 + CA264_07695 0.58 -0.1 1,784,542 - CA264_07695 0.82 +1.1 1,784,549 - CA264_07695 0.83 -1.9 1,784,594 - -0.3 1,784,615 - +0.5 1,784,627 + +1.2 1,784,640 + -0.5 1,784,715 - -0.2 1,784,715 - +0.5 1,784,775 + CA264_07700 0.27 -0.7 1,784,775 + CA264_07700 0.27 +1.0 1,784,775 + CA264_07700 0.27 -0.1 1,784,775 + CA264_07700 0.27 +1.6 1,784,792 + CA264_07700 0.35 +1.7 1,784,792 + CA264_07700 0.35 -0.2 1,784,799 + CA264_07700 0.39 +1.3 1,784,799 + CA264_07700 0.39 +0.5 1,784,800 - CA264_07700 0.39 -0.7 1,784,827 - CA264_07700 0.52 +0.3 1,784,827 - CA264_07700 0.52 +0.2 1,784,827 - CA264_07700 0.52 -1.7 1,784,849 - CA264_07700 0.63 +0.4 1,784,892 + CA264_07700 0.84 +0.4 1,784,893 - CA264_07700 0.85 +0.8 1,784,898 + CA264_07700 0.87 -0.2 1,784,898 + CA264_07700 0.87 +0.2 1,784,898 + CA264_07700 0.87 +0.1 1,784,898 + CA264_07700 0.87 +0.2 1,784,898 + CA264_07700 0.87 -0.4 1,784,898 + CA264_07700 0.87 +0.3 1,784,899 - CA264_07700 0.88 -1.4 1,784,899 - CA264_07700 0.88 -0.9 1,784,899 - CA264_07700 0.88 +0.0 1,784,899 - CA264_07700 0.88 +0.4 1,784,899 - CA264_07700 0.88 +1.2 1,784,903 - +0.3 1,784,904 + -0.6 1,784,905 - +0.5 1,784,919 + +0.1 1,784,919 + -0.5 1,784,920 - +0.1 1,784,927 + +1.6 1,784,928 - -0.5 1,784,947 + -0.6 1,784,947 + +0.6 1,784,948 - -0.2 1,784,948 - -1.0 1,784,960 + +0.1 1,784,961 - -0.0 1,784,961 - -0.5 1,784,965 + +1.0 1,784,966 - +0.9 1,784,966 - -1.0 1,785,012 + +0.9 1,785,013 - -0.2 1,785,077 - CA264_07705 0.38 -0.1 1,785,141 - CA264_07705 0.70 -0.5 1,785,141 - CA264_07705 0.70 -0.2 1,785,141 - CA264_07705 0.70 -0.3 1,785,143 - CA264_07705 0.71 -1.8 1,785,229 - -1.6 1,785,244 - +0.3 1,785,244 - +0.3 1,785,261 - -0.1 1,785,276 + +0.2 1,785,280 + +0.4 1,785,280 + -0.7 1,785,291 - -0.4 1,785,323 + +0.5 1,785,324 - -0.7 1,785,363 + -0.3 1,785,363 + -0.3 1,785,363 + -0.1 1,785,384 + +0.5 1,785,385 - +0.5 1,785,385 - +0.1 1,785,431 + +0.1 1,785,431 + +0.2 1,785,431 + -0.6 1,785,432 - -0.8 1,785,485 - +2.3 1,785,502 + -0.4 1,785,502 + -1.2 1,785,502 + +0.2 1,785,503 - +1.6 1,785,503 - +0.3 1,785,507 - -0.4 1,785,520 + -0.2 1,785,521 - +0.8 1,785,534 + +0.0 1,785,537 + -0.9 1,785,558 - +0.1 1,785,579 - -0.1
Or see this region's nucleotide sequence