Experiment: m.b. Chlorite 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07475 and CA264_07480 are separated by 20 nucleotides CA264_07480 and CA264_07485 are separated by 3 nucleotides CA264_07485 and CA264_07490 are separated by 133 nucleotides
CA264_07475: CA264_07475 - hypothetical protein, at 1,730,961 to 1,732,550
_07475
CA264_07480: CA264_07480 - DUF58 domain-containing protein, at 1,732,571 to 1,733,482
_07480
CA264_07485: CA264_07485 - septal ring lytic transglycosylase RlpA family lipoprotein, at 1,733,486 to 1,733,899
_07485
CA264_07490: CA264_07490 - RNA-binding protein, at 1,734,033 to 1,734,362
_07490
Position (kb)
1732
1733
1734 Strain fitness (log2 ratio)
-2
-1
0
1 at 1731.573 kb on - strand, within CA264_07475 at 1731.648 kb on + strand, within CA264_07475 at 1731.655 kb on + strand, within CA264_07475 at 1731.761 kb on + strand, within CA264_07475 at 1731.765 kb on + strand, within CA264_07475 at 1731.765 kb on + strand, within CA264_07475 at 1731.765 kb on + strand, within CA264_07475 at 1731.766 kb on - strand, within CA264_07475 at 1731.768 kb on + strand, within CA264_07475 at 1731.768 kb on + strand, within CA264_07475 at 1731.769 kb on - strand, within CA264_07475 at 1731.904 kb on - strand, within CA264_07475 at 1731.925 kb on + strand, within CA264_07475 at 1731.926 kb on - strand, within CA264_07475 at 1732.125 kb on + strand, within CA264_07475 at 1732.126 kb on - strand, within CA264_07475 at 1732.126 kb on - strand, within CA264_07475 at 1732.339 kb on + strand, within CA264_07475 at 1732.352 kb on - strand, within CA264_07475 at 1732.378 kb on - strand, within CA264_07475 at 1732.378 kb on - strand, within CA264_07475 at 1732.437 kb on + strand at 1732.437 kb on + strand at 1732.438 kb on - strand at 1732.439 kb on + strand at 1732.440 kb on - strand at 1732.447 kb on + strand at 1732.447 kb on + strand at 1732.448 kb on - strand at 1732.475 kb on + strand at 1732.517 kb on - strand at 1732.593 kb on - strand at 1732.593 kb on - strand at 1732.605 kb on + strand at 1732.615 kb on + strand at 1732.616 kb on - strand at 1732.659 kb on + strand at 1732.714 kb on - strand, within CA264_07480 at 1732.780 kb on - strand, within CA264_07480 at 1732.842 kb on - strand, within CA264_07480 at 1732.910 kb on + strand, within CA264_07480 at 1732.910 kb on + strand, within CA264_07480 at 1732.910 kb on + strand, within CA264_07480 at 1733.203 kb on - strand, within CA264_07480 at 1733.205 kb on + strand, within CA264_07480 at 1733.205 kb on + strand, within CA264_07480 at 1733.206 kb on - strand, within CA264_07480 at 1733.209 kb on + strand, within CA264_07480 at 1733.263 kb on - strand, within CA264_07480 at 1733.338 kb on - strand, within CA264_07480 at 1733.453 kb on + strand at 1733.454 kb on - strand at 1733.495 kb on - strand at 1733.630 kb on + strand, within CA264_07485 at 1733.631 kb on - strand, within CA264_07485 at 1733.762 kb on - strand, within CA264_07485 at 1733.812 kb on - strand, within CA264_07485 at 1733.838 kb on + strand, within CA264_07485 at 1733.839 kb on - strand, within CA264_07485 at 1733.880 kb on - strand at 1733.891 kb on + strand at 1733.891 kb on + strand at 1733.894 kb on - strand at 1733.894 kb on - strand at 1733.900 kb on - strand at 1733.902 kb on + strand at 1733.903 kb on - strand at 1733.907 kb on + strand at 1733.974 kb on + strand at 1733.987 kb on + strand at 1733.987 kb on + strand at 1733.992 kb on + strand at 1734.233 kb on + strand, within CA264_07490 at 1734.350 kb on + strand at 1734.386 kb on + strand at 1734.386 kb on + strand at 1734.429 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM remove 1,731,573 - CA264_07475 0.38 +0.6 1,731,648 + CA264_07475 0.43 -0.4 1,731,655 + CA264_07475 0.44 -0.1 1,731,761 + CA264_07475 0.50 +0.3 1,731,765 + CA264_07475 0.51 +1.1 1,731,765 + CA264_07475 0.51 +1.3 1,731,765 + CA264_07475 0.51 -1.2 1,731,766 - CA264_07475 0.51 -0.4 1,731,768 + CA264_07475 0.51 -0.2 1,731,768 + CA264_07475 0.51 -0.2 1,731,769 - CA264_07475 0.51 +0.2 1,731,904 - CA264_07475 0.59 +0.9 1,731,925 + CA264_07475 0.61 +1.0 1,731,926 - CA264_07475 0.61 -0.1 1,732,125 + CA264_07475 0.73 +0.6 1,732,126 - CA264_07475 0.73 +0.8 1,732,126 - CA264_07475 0.73 +0.3 1,732,339 + CA264_07475 0.87 -0.0 1,732,352 - CA264_07475 0.87 -1.6 1,732,378 - CA264_07475 0.89 +0.6 1,732,378 - CA264_07475 0.89 -0.8 1,732,437 + -0.3 1,732,437 + -0.5 1,732,438 - +0.2 1,732,439 + +0.3 1,732,440 - -0.3 1,732,447 + +0.2 1,732,447 + -0.1 1,732,448 - -0.4 1,732,475 + +0.5 1,732,517 - -0.4 1,732,593 - -1.2 1,732,593 - -0.6 1,732,605 + +0.1 1,732,615 + +0.1 1,732,616 - +0.0 1,732,659 + -1.8 1,732,714 - CA264_07480 0.16 -1.0 1,732,780 - CA264_07480 0.23 +0.2 1,732,842 - CA264_07480 0.30 -0.5 1,732,910 + CA264_07480 0.37 +1.1 1,732,910 + CA264_07480 0.37 +1.7 1,732,910 + CA264_07480 0.37 +0.6 1,733,203 - CA264_07480 0.69 -1.1 1,733,205 + CA264_07480 0.70 +0.3 1,733,205 + CA264_07480 0.70 -0.8 1,733,206 - CA264_07480 0.70 +1.6 1,733,209 + CA264_07480 0.70 +0.1 1,733,263 - CA264_07480 0.76 +0.0 1,733,338 - CA264_07480 0.84 -0.4 1,733,453 + -0.7 1,733,454 - +0.3 1,733,495 - +0.2 1,733,630 + CA264_07485 0.35 -1.7 1,733,631 - CA264_07485 0.35 +0.2 1,733,762 - CA264_07485 0.67 +0.4 1,733,812 - CA264_07485 0.79 +0.6 1,733,838 + CA264_07485 0.85 -0.6 1,733,839 - CA264_07485 0.85 -1.0 1,733,880 - -0.4 1,733,891 + -1.3 1,733,891 + -0.1 1,733,894 - -0.3 1,733,894 - +1.3 1,733,900 - -0.6 1,733,902 + +0.5 1,733,903 - +0.3 1,733,907 + +1.6 1,733,974 + +1.1 1,733,987 + -1.1 1,733,987 + -0.1 1,733,992 + -1.6 1,734,233 + CA264_07490 0.61 -0.4 1,734,350 + +0.4 1,734,386 + -0.5 1,734,386 + +0.1 1,734,429 - -0.4
Or see this region's nucleotide sequence