Experiment: m.b. Chlorite 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_06305 and CA264_06310 overlap by 4 nucleotides CA264_06310 and CA264_06315 are separated by 2 nucleotides CA264_06315 and CA264_06320 are separated by 62 nucleotides CA264_06320 and CA264_06325 are separated by 22 nucleotides CA264_06325 and CA264_06330 overlap by 4 nucleotides CA264_06330 and CA264_06335 are separated by 5 nucleotides
CA264_06305: CA264_06305 - pH homeostasis protein A, at 1,466,633 to 1,468,942
_06305
CA264_06310: CA264_06310 - cation:proton antiporter, at 1,468,939 to 1,469,481
_06310
CA264_06315: CA264_06315 - cation:proton antiporter, at 1,469,484 to 1,469,840
_06315
CA264_06320: CA264_06320 - Na+/H+ antiporter subunit D, at 1,469,903 to 1,471,420
_06320
CA264_06325: CA264_06325 - cation:proton antiporter, at 1,471,443 to 1,471,940
_06325
CA264_06330: CA264_06330 - cation:proton antiporter, at 1,471,937 to 1,472,206
_06330
CA264_06335: CA264_06335 - Na+/H+ antiporter subunit G, at 1,472,212 to 1,472,655
_06335
Position (kb)
1469
1470
1471
1472 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1469.005 kb on + strand, within CA264_06310 at 1469.006 kb on - strand, within CA264_06310 at 1469.110 kb on - strand, within CA264_06310 at 1469.110 kb on - strand, within CA264_06310 at 1469.143 kb on + strand, within CA264_06310 at 1469.144 kb on - strand, within CA264_06310 at 1469.144 kb on - strand, within CA264_06310 at 1469.275 kb on + strand, within CA264_06310 at 1469.276 kb on - strand, within CA264_06310 at 1469.280 kb on - strand, within CA264_06310 at 1469.344 kb on + strand, within CA264_06310 at 1469.344 kb on + strand, within CA264_06310 at 1469.344 kb on + strand, within CA264_06310 at 1469.344 kb on + strand, within CA264_06310 at 1469.344 kb on + strand, within CA264_06310 at 1469.345 kb on - strand, within CA264_06310 at 1469.345 kb on - strand, within CA264_06310 at 1469.385 kb on - strand, within CA264_06310 at 1469.451 kb on + strand at 1469.451 kb on + strand at 1469.491 kb on + strand at 1469.536 kb on - strand, within CA264_06315 at 1469.542 kb on + strand, within CA264_06315 at 1469.569 kb on + strand, within CA264_06315 at 1469.630 kb on + strand, within CA264_06315 at 1469.654 kb on - strand, within CA264_06315 at 1469.685 kb on + strand, within CA264_06315 at 1469.685 kb on + strand, within CA264_06315 at 1469.724 kb on - strand, within CA264_06315 at 1469.789 kb on + strand, within CA264_06315 at 1469.790 kb on - strand, within CA264_06315 at 1469.838 kb on + strand at 1469.885 kb on + strand at 1469.892 kb on - strand at 1469.902 kb on + strand at 1469.903 kb on - strand at 1469.938 kb on + strand at 1469.939 kb on - strand at 1469.948 kb on + strand at 1470.091 kb on - strand, within CA264_06320 at 1470.119 kb on - strand, within CA264_06320 at 1470.234 kb on - strand, within CA264_06320 at 1470.305 kb on + strand, within CA264_06320 at 1470.305 kb on + strand, within CA264_06320 at 1470.306 kb on - strand, within CA264_06320 at 1470.306 kb on - strand, within CA264_06320 at 1470.306 kb on - strand, within CA264_06320 at 1470.321 kb on + strand, within CA264_06320 at 1470.393 kb on - strand, within CA264_06320 at 1470.447 kb on + strand, within CA264_06320 at 1470.447 kb on + strand, within CA264_06320 at 1470.448 kb on - strand, within CA264_06320 at 1470.448 kb on - strand, within CA264_06320 at 1470.448 kb on - strand, within CA264_06320 at 1470.448 kb on - strand, within CA264_06320 at 1470.448 kb on - strand, within CA264_06320 at 1470.448 kb on - strand, within CA264_06320 at 1470.448 kb on - strand, within CA264_06320 at 1470.449 kb on + strand, within CA264_06320 at 1470.449 kb on + strand, within CA264_06320 at 1470.528 kb on + strand, within CA264_06320 at 1470.532 kb on + strand, within CA264_06320 at 1470.533 kb on - strand, within CA264_06320 at 1470.533 kb on - strand, within CA264_06320 at 1470.611 kb on + strand, within CA264_06320 at 1470.626 kb on - strand, within CA264_06320 at 1470.643 kb on + strand, within CA264_06320 at 1470.655 kb on + strand, within CA264_06320 at 1470.677 kb on - strand, within CA264_06320 at 1470.724 kb on + strand, within CA264_06320 at 1470.725 kb on - strand, within CA264_06320 at 1470.725 kb on - strand, within CA264_06320 at 1470.725 kb on - strand, within CA264_06320 at 1470.842 kb on + strand, within CA264_06320 at 1470.844 kb on + strand, within CA264_06320 at 1470.844 kb on + strand, within CA264_06320 at 1470.844 kb on + strand, within CA264_06320 at 1470.844 kb on + strand, within CA264_06320 at 1470.845 kb on - strand, within CA264_06320 at 1470.845 kb on - strand, within CA264_06320 at 1470.845 kb on - strand, within CA264_06320 at 1471.127 kb on + strand, within CA264_06320 at 1471.224 kb on + strand, within CA264_06320 at 1471.224 kb on + strand, within CA264_06320 at 1471.225 kb on - strand, within CA264_06320 at 1471.274 kb on + strand at 1471.275 kb on - strand at 1471.275 kb on - strand at 1471.281 kb on - strand at 1471.281 kb on - strand at 1471.329 kb on - strand at 1471.407 kb on + strand at 1471.407 kb on + strand at 1471.418 kb on + strand at 1471.427 kb on + strand at 1471.428 kb on - strand at 1471.437 kb on - strand at 1471.437 kb on - strand at 1471.437 kb on - strand at 1471.437 kb on - strand at 1471.489 kb on - strand at 1471.494 kb on + strand, within CA264_06325 at 1471.525 kb on - strand, within CA264_06325 at 1471.525 kb on - strand, within CA264_06325 at 1471.601 kb on + strand, within CA264_06325 at 1471.602 kb on - strand, within CA264_06325 at 1471.606 kb on - strand, within CA264_06325 at 1471.710 kb on + strand, within CA264_06325 at 1471.711 kb on - strand, within CA264_06325 at 1471.711 kb on - strand, within CA264_06325 at 1471.766 kb on - strand, within CA264_06325 at 1471.784 kb on + strand, within CA264_06325 at 1471.784 kb on + strand, within CA264_06325 at 1471.811 kb on + strand, within CA264_06325 at 1471.812 kb on - strand, within CA264_06325 at 1471.814 kb on - strand, within CA264_06325 at 1471.819 kb on + strand, within CA264_06325 at 1471.819 kb on + strand, within CA264_06325 at 1471.819 kb on + strand, within CA264_06325 at 1471.819 kb on + strand, within CA264_06325 at 1471.843 kb on - strand, within CA264_06325 at 1471.856 kb on - strand, within CA264_06325 at 1471.856 kb on - strand, within CA264_06325 at 1471.970 kb on - strand, within CA264_06330 at 1471.980 kb on + strand, within CA264_06330 at 1472.086 kb on - strand, within CA264_06330 at 1472.181 kb on - strand at 1472.183 kb on + strand at 1472.188 kb on + strand at 1472.189 kb on - strand at 1472.189 kb on - strand at 1472.189 kb on - strand at 1472.197 kb on + strand at 1472.224 kb on - strand at 1472.224 kb on - strand at 1472.226 kb on - strand at 1472.330 kb on - strand, within CA264_06335
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM remove 1,469,005 + CA264_06310 0.12 -0.2 1,469,006 - CA264_06310 0.12 -1.0 1,469,110 - CA264_06310 0.31 -0.8 1,469,110 - CA264_06310 0.31 -0.6 1,469,143 + CA264_06310 0.38 +1.1 1,469,144 - CA264_06310 0.38 +0.0 1,469,144 - CA264_06310 0.38 -1.1 1,469,275 + CA264_06310 0.62 -0.6 1,469,276 - CA264_06310 0.62 -0.7 1,469,280 - CA264_06310 0.63 -0.3 1,469,344 + CA264_06310 0.75 -0.1 1,469,344 + CA264_06310 0.75 -1.1 1,469,344 + CA264_06310 0.75 +1.2 1,469,344 + CA264_06310 0.75 -0.1 1,469,344 + CA264_06310 0.75 -0.1 1,469,345 - CA264_06310 0.75 +0.4 1,469,345 - CA264_06310 0.75 +0.8 1,469,385 - CA264_06310 0.82 -0.5 1,469,451 + -0.3 1,469,451 + -0.3 1,469,491 + +0.3 1,469,536 - CA264_06315 0.15 +0.5 1,469,542 + CA264_06315 0.16 +0.5 1,469,569 + CA264_06315 0.24 -1.2 1,469,630 + CA264_06315 0.41 -0.2 1,469,654 - CA264_06315 0.48 +0.5 1,469,685 + CA264_06315 0.56 +0.7 1,469,685 + CA264_06315 0.56 -0.5 1,469,724 - CA264_06315 0.67 -0.9 1,469,789 + CA264_06315 0.85 +0.0 1,469,790 - CA264_06315 0.86 -0.9 1,469,838 + -0.9 1,469,885 + -0.4 1,469,892 - -0.0 1,469,902 + -1.1 1,469,903 - -0.3 1,469,938 + +0.1 1,469,939 - +0.2 1,469,948 + -0.9 1,470,091 - CA264_06320 0.12 +0.4 1,470,119 - CA264_06320 0.14 -0.0 1,470,234 - CA264_06320 0.22 +0.1 1,470,305 + CA264_06320 0.26 -0.5 1,470,305 + CA264_06320 0.26 +0.6 1,470,306 - CA264_06320 0.27 -0.1 1,470,306 - CA264_06320 0.27 -1.1 1,470,306 - CA264_06320 0.27 +0.9 1,470,321 + CA264_06320 0.28 -0.6 1,470,393 - CA264_06320 0.32 +0.3 1,470,447 + CA264_06320 0.36 +0.9 1,470,447 + CA264_06320 0.36 -0.4 1,470,448 - CA264_06320 0.36 -0.8 1,470,448 - CA264_06320 0.36 +0.0 1,470,448 - CA264_06320 0.36 -0.5 1,470,448 - CA264_06320 0.36 +0.7 1,470,448 - CA264_06320 0.36 -0.4 1,470,448 - CA264_06320 0.36 -1.0 1,470,448 - CA264_06320 0.36 -0.5 1,470,449 + CA264_06320 0.36 +0.5 1,470,449 + CA264_06320 0.36 +0.0 1,470,528 + CA264_06320 0.41 -0.3 1,470,532 + CA264_06320 0.41 -0.2 1,470,533 - CA264_06320 0.42 -1.3 1,470,533 - CA264_06320 0.42 -0.6 1,470,611 + CA264_06320 0.47 -0.3 1,470,626 - CA264_06320 0.48 +0.7 1,470,643 + CA264_06320 0.49 -0.3 1,470,655 + CA264_06320 0.50 +1.2 1,470,677 - CA264_06320 0.51 +0.1 1,470,724 + CA264_06320 0.54 -0.4 1,470,725 - CA264_06320 0.54 -1.1 1,470,725 - CA264_06320 0.54 +0.5 1,470,725 - CA264_06320 0.54 +1.9 1,470,842 + CA264_06320 0.62 -1.2 1,470,844 + CA264_06320 0.62 -0.3 1,470,844 + CA264_06320 0.62 -0.4 1,470,844 + CA264_06320 0.62 -2.1 1,470,844 + CA264_06320 0.62 -0.4 1,470,845 - CA264_06320 0.62 -0.2 1,470,845 - CA264_06320 0.62 -0.4 1,470,845 - CA264_06320 0.62 -0.5 1,471,127 + CA264_06320 0.81 +1.7 1,471,224 + CA264_06320 0.87 +0.3 1,471,224 + CA264_06320 0.87 +0.2 1,471,225 - CA264_06320 0.87 -1.3 1,471,274 + -0.4 1,471,275 - -0.2 1,471,275 - -0.5 1,471,281 - -0.4 1,471,281 - +0.0 1,471,329 - +0.2 1,471,407 + -0.4 1,471,407 + +0.2 1,471,418 + -0.0 1,471,427 + +0.2 1,471,428 - -0.1 1,471,437 - -0.1 1,471,437 - -0.0 1,471,437 - -0.1 1,471,437 - -0.1 1,471,489 - -0.2 1,471,494 + CA264_06325 0.10 +1.0 1,471,525 - CA264_06325 0.16 -0.2 1,471,525 - CA264_06325 0.16 +0.7 1,471,601 + CA264_06325 0.32 -0.0 1,471,602 - CA264_06325 0.32 +0.2 1,471,606 - CA264_06325 0.33 -0.7 1,471,710 + CA264_06325 0.54 -0.1 1,471,711 - CA264_06325 0.54 +1.1 1,471,711 - CA264_06325 0.54 -0.2 1,471,766 - CA264_06325 0.65 -0.3 1,471,784 + CA264_06325 0.68 +0.8 1,471,784 + CA264_06325 0.68 -0.5 1,471,811 + CA264_06325 0.74 +0.7 1,471,812 - CA264_06325 0.74 -0.2 1,471,814 - CA264_06325 0.74 +0.4 1,471,819 + CA264_06325 0.76 +0.5 1,471,819 + CA264_06325 0.76 +1.3 1,471,819 + CA264_06325 0.76 -0.4 1,471,819 + CA264_06325 0.76 +1.1 1,471,843 - CA264_06325 0.80 +1.1 1,471,856 - CA264_06325 0.83 +1.8 1,471,856 - CA264_06325 0.83 -0.2 1,471,970 - CA264_06330 0.12 +1.6 1,471,980 + CA264_06330 0.16 +1.5 1,472,086 - CA264_06330 0.55 +0.0 1,472,181 - +0.6 1,472,183 + +0.0 1,472,188 + +1.0 1,472,189 - +0.6 1,472,189 - -0.3 1,472,189 - +0.3 1,472,197 + -0.2 1,472,224 - +0.1 1,472,224 - +1.0 1,472,226 - +0.0 1,472,330 - CA264_06335 0.27 -0.1
Or see this region's nucleotide sequence