Strain Fitness in Variovorax sp. OAS795 around ABID97_RS28395

Experiment: L-Leucine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABID97_RS28390 and ABID97_RS28395 are separated by 31 nucleotidesABID97_RS28395 and ABID97_RS28400 are separated by 124 nucleotides ABID97_RS28390: ABID97_RS28390 - MFS transporter, at 597,581 to 598,891 _RS28390 ABID97_RS28395: ABID97_RS28395 - LysR substrate-binding domain-containing protein, at 598,923 to 599,795 _RS28395 ABID97_RS28400: ABID97_RS28400 - oxidoreductase, at 599,920 to 600,816 _RS28400 Position (kb) 598 599 600Strain fitness (log2 ratio) -1 0 1at 598.176 kb on - strand, within ABID97_RS28390at 599.252 kb on - strand, within ABID97_RS28395

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Leucine (C)
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598,176 - ABID97_RS28390 0.45 -0.1
599,252 - ABID97_RS28395 0.38 -0.3

Or see this region's nucleotide sequence