Experiment: L-Leucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS25135 and ABID97_RS25140 are separated by 160 nucleotides ABID97_RS25140 and ABID97_RS25145 are separated by 141 nucleotides
ABID97_RS25135: ABID97_RS25135 - AMP-binding protein, at 5,206,619 to 5,208,289
_RS25135
ABID97_RS25140: ABID97_RS25140 - isovaleryl-CoA dehydrogenase, at 5,208,450 to 5,209,622
_RS25140
ABID97_RS25145: ABID97_RS25145 - AraC family transcriptional regulator, at 5,209,764 to 5,210,792
_RS25145
Position (kb) 5208
5209
5210 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 5207.557 kb on - strand, within ABID97_RS25135 at 5208.144 kb on + strand at 5208.572 kb on - strand, within ABID97_RS25140 at 5208.709 kb on + strand, within ABID97_RS25140 at 5208.710 kb on - strand, within ABID97_RS25140 at 5208.715 kb on + strand, within ABID97_RS25140 at 5208.715 kb on + strand, within ABID97_RS25140 at 5208.715 kb on + strand, within ABID97_RS25140 at 5208.715 kb on + strand, within ABID97_RS25140 at 5208.716 kb on - strand, within ABID97_RS25140 at 5208.742 kb on + strand, within ABID97_RS25140 at 5208.742 kb on + strand, within ABID97_RS25140 at 5208.742 kb on + strand, within ABID97_RS25140 at 5208.742 kb on + strand, within ABID97_RS25140 at 5208.742 kb on + strand, within ABID97_RS25140 at 5208.742 kb on + strand, within ABID97_RS25140 at 5208.742 kb on + strand, within ABID97_RS25140 at 5208.743 kb on - strand, within ABID97_RS25140 at 5208.743 kb on - strand, within ABID97_RS25140 at 5208.743 kb on - strand, within ABID97_RS25140 at 5208.979 kb on + strand, within ABID97_RS25140 at 5208.979 kb on + strand, within ABID97_RS25140 at 5208.980 kb on - strand, within ABID97_RS25140 at 5209.102 kb on + strand, within ABID97_RS25140 at 5209.102 kb on + strand, within ABID97_RS25140 at 5209.102 kb on + strand, within ABID97_RS25140 at 5209.103 kb on - strand, within ABID97_RS25140 at 5209.165 kb on + strand, within ABID97_RS25140 at 5209.168 kb on + strand, within ABID97_RS25140 at 5209.168 kb on + strand, within ABID97_RS25140 at 5209.169 kb on - strand, within ABID97_RS25140 at 5209.279 kb on + strand, within ABID97_RS25140 at 5209.279 kb on + strand, within ABID97_RS25140 at 5209.280 kb on - strand, within ABID97_RS25140 at 5209.280 kb on - strand, within ABID97_RS25140 at 5209.695 kb on + strand at 5209.696 kb on - strand at 5209.696 kb on - strand at 5209.820 kb on - strand at 5209.840 kb on - strand at 5209.840 kb on - strand at 5209.849 kb on - strand at 5209.849 kb on - strand at 5210.022 kb on + strand, within ABID97_RS25145 at 5210.235 kb on + strand, within ABID97_RS25145 at 5210.235 kb on + strand, within ABID97_RS25145 at 5210.386 kb on - strand, within ABID97_RS25145 at 5210.386 kb on - strand, within ABID97_RS25145
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (C) remove 5,207,557 - ABID97_RS25135 0.56 -0.2 5,208,144 + -3.6 5,208,572 - ABID97_RS25140 0.10 -1.8 5,208,709 + ABID97_RS25140 0.22 -4.8 5,208,710 - ABID97_RS25140 0.22 -4.6 5,208,715 + ABID97_RS25140 0.23 -4.3 5,208,715 + ABID97_RS25140 0.23 -5.4 5,208,715 + ABID97_RS25140 0.23 -2.2 5,208,715 + ABID97_RS25140 0.23 -1.1 5,208,716 - ABID97_RS25140 0.23 -5.6 5,208,742 + ABID97_RS25140 0.25 -5.4 5,208,742 + ABID97_RS25140 0.25 -2.6 5,208,742 + ABID97_RS25140 0.25 -4.9 5,208,742 + ABID97_RS25140 0.25 -5.1 5,208,742 + ABID97_RS25140 0.25 -1.1 5,208,742 + ABID97_RS25140 0.25 -3.5 5,208,742 + ABID97_RS25140 0.25 -4.3 5,208,743 - ABID97_RS25140 0.25 -4.0 5,208,743 - ABID97_RS25140 0.25 -3.8 5,208,743 - ABID97_RS25140 0.25 -1.1 5,208,979 + ABID97_RS25140 0.45 -4.3 5,208,979 + ABID97_RS25140 0.45 -4.8 5,208,980 - ABID97_RS25140 0.45 -0.9 5,209,102 + ABID97_RS25140 0.56 -4.9 5,209,102 + ABID97_RS25140 0.56 -5.5 5,209,102 + ABID97_RS25140 0.56 -4.1 5,209,103 - ABID97_RS25140 0.56 -3.0 5,209,165 + ABID97_RS25140 0.61 -3.8 5,209,168 + ABID97_RS25140 0.61 -5.0 5,209,168 + ABID97_RS25140 0.61 -4.9 5,209,169 - ABID97_RS25140 0.61 -3.9 5,209,279 + ABID97_RS25140 0.71 -3.1 5,209,279 + ABID97_RS25140 0.71 -5.1 5,209,280 - ABID97_RS25140 0.71 -5.5 5,209,280 - ABID97_RS25140 0.71 -0.6 5,209,695 + -0.9 5,209,696 - -0.4 5,209,696 - -0.0 5,209,820 - -0.6 5,209,840 - +1.0 5,209,840 - -0.2 5,209,849 - -3.9 5,209,849 - -1.5 5,210,022 + ABID97_RS25145 0.25 -4.8 5,210,235 + ABID97_RS25145 0.46 -3.3 5,210,235 + ABID97_RS25145 0.46 -5.6 5,210,386 - ABID97_RS25145 0.60 -3.4 5,210,386 - ABID97_RS25145 0.60 -4.3
Or see this region's nucleotide sequence