Experiment: L-Leucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS24910 and ABID97_RS24915 are separated by 15 nucleotides ABID97_RS24915 and ABID97_RS24920 are separated by 26 nucleotides ABID97_RS24920 and ABID97_RS24925 are separated by 20 nucleotides ABID97_RS24925 and ABID97_RS24930 are separated by 1 nucleotides
ABID97_RS24910: ABID97_RS24910 - YdeI/OmpD-associated family protein, at 5,160,617 to 5,161,228
_RS24910
ABID97_RS24915: ABID97_RS24915 - hypothetical protein, at 5,161,244 to 5,161,864
_RS24915
ABID97_RS24920: ABID97_RS24920 - Holliday junction branch migration protein RuvA, at 5,161,891 to 5,162,463
_RS24920
ABID97_RS24925: ABID97_RS24925 - PhoH family protein, at 5,162,484 to 5,163,440
_RS24925
ABID97_RS24930: ABID97_RS24930 - rRNA maturation RNase YbeY, at 5,163,442 to 5,163,903
_RS24930
Position (kb) 5161
5162
5163 Strain fitness (log2 ratio) -2
-1
0
1 at 5161.121 kb on + strand, within ABID97_RS24910 at 5161.220 kb on + strand at 5161.246 kb on - strand at 5161.250 kb on - strand at 5161.284 kb on + strand at 5161.285 kb on - strand at 5161.285 kb on - strand at 5161.285 kb on - strand at 5161.285 kb on - strand at 5161.286 kb on - strand at 5161.543 kb on - strand, within ABID97_RS24915 at 5161.543 kb on - strand, within ABID97_RS24915 at 5161.575 kb on + strand, within ABID97_RS24915 at 5161.629 kb on - strand, within ABID97_RS24915 at 5161.657 kb on - strand, within ABID97_RS24915 at 5161.657 kb on - strand, within ABID97_RS24915 at 5161.657 kb on - strand, within ABID97_RS24915 at 5161.657 kb on - strand, within ABID97_RS24915 at 5161.657 kb on - strand, within ABID97_RS24915 at 5161.657 kb on - strand, within ABID97_RS24915 at 5161.699 kb on - strand, within ABID97_RS24915 at 5161.846 kb on - strand at 5161.846 kb on - strand at 5161.892 kb on + strand at 5162.357 kb on + strand, within ABID97_RS24920 at 5162.357 kb on + strand, within ABID97_RS24920 at 5162.358 kb on - strand, within ABID97_RS24920 at 5162.459 kb on - strand at 5162.682 kb on + strand, within ABID97_RS24925 at 5162.682 kb on + strand, within ABID97_RS24925 at 5162.895 kb on + strand, within ABID97_RS24925 at 5162.895 kb on + strand, within ABID97_RS24925 at 5162.895 kb on + strand, within ABID97_RS24925 at 5162.895 kb on + strand, within ABID97_RS24925 at 5162.895 kb on + strand, within ABID97_RS24925
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (C) remove 5,161,121 + ABID97_RS24910 0.82 -0.1 5,161,220 + +1.0 5,161,246 - +0.2 5,161,250 - -0.3 5,161,284 + -0.9 5,161,285 - -2.2 5,161,285 - -0.9 5,161,285 - -0.1 5,161,285 - -0.2 5,161,286 - -0.4 5,161,543 - ABID97_RS24915 0.48 -0.1 5,161,543 - ABID97_RS24915 0.48 -0.8 5,161,575 + ABID97_RS24915 0.53 +0.4 5,161,629 - ABID97_RS24915 0.62 -0.8 5,161,657 - ABID97_RS24915 0.67 -0.6 5,161,657 - ABID97_RS24915 0.67 -0.5 5,161,657 - ABID97_RS24915 0.67 -0.5 5,161,657 - ABID97_RS24915 0.67 -0.3 5,161,657 - ABID97_RS24915 0.67 +0.2 5,161,657 - ABID97_RS24915 0.67 +1.1 5,161,699 - ABID97_RS24915 0.73 -0.1 5,161,846 - -0.4 5,161,846 - -0.2 5,161,892 + +0.0 5,162,357 + ABID97_RS24920 0.81 -0.6 5,162,357 + ABID97_RS24920 0.81 -2.5 5,162,358 - ABID97_RS24920 0.82 -1.6 5,162,459 - -0.4 5,162,682 + ABID97_RS24925 0.21 -0.1 5,162,682 + ABID97_RS24925 0.21 +0.2 5,162,895 + ABID97_RS24925 0.43 -0.9 5,162,895 + ABID97_RS24925 0.43 +0.4 5,162,895 + ABID97_RS24925 0.43 -0.2 5,162,895 + ABID97_RS24925 0.43 -1.7 5,162,895 + ABID97_RS24925 0.43 +0.1
Or see this region's nucleotide sequence