Experiment: L-Leucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS24040 and ABID97_RS24045 are separated by 63 nucleotides ABID97_RS24045 and ABID97_RS24050 are separated by 9 nucleotides ABID97_RS24050 and ABID97_RS24055 are separated by 79 nucleotides ABID97_RS24055 and ABID97_RS24060 are separated by 127 nucleotides ABID97_RS24060 and ABID97_RS24065 are separated by 69 nucleotides
ABID97_RS24040: ABID97_RS24040 - MarR family transcriptional regulator, at 4,971,564 to 4,972,055
_RS24040
ABID97_RS24045: ABID97_RS24045 - type II toxin-antitoxin system prevent-host-death family antitoxin, at 4,972,119 to 4,972,388
_RS24045
ABID97_RS24050: ABID97_RS24050 - CcdB family protein, at 4,972,398 to 4,972,715
_RS24050
ABID97_RS24055: ABID97_RS24055 - TetR/AcrR family transcriptional regulator, at 4,972,795 to 4,973,457
_RS24055
ABID97_RS24060: ABID97_RS24060 - VOC family protein, at 4,973,585 to 4,974,001
_RS24060
ABID97_RS24065: ABID97_RS24065 - SRPBCC family protein, at 4,974,071 to 4,974,598
_RS24065
Position (kb) 4972
4973
4974 Strain fitness (log2 ratio) -2
-1
0
1 at 4972.047 kb on + strand at 4972.047 kb on + strand at 4972.047 kb on + strand at 4972.047 kb on + strand at 4972.047 kb on + strand at 4972.048 kb on - strand at 4972.048 kb on - strand at 4972.048 kb on - strand at 4972.048 kb on - strand at 4972.048 kb on - strand at 4972.088 kb on + strand at 4972.162 kb on - strand, within ABID97_RS24045 at 4972.213 kb on + strand, within ABID97_RS24045 at 4972.312 kb on - strand, within ABID97_RS24045 at 4972.312 kb on - strand, within ABID97_RS24045 at 4972.312 kb on - strand, within ABID97_RS24045 at 4972.413 kb on - strand at 4972.413 kb on - strand at 4972.417 kb on - strand at 4972.417 kb on - strand at 4972.417 kb on - strand at 4972.711 kb on + strand at 4972.711 kb on + strand at 4972.796 kb on + strand at 4972.922 kb on + strand, within ABID97_RS24055 at 4972.922 kb on + strand, within ABID97_RS24055 at 4972.922 kb on + strand, within ABID97_RS24055 at 4972.923 kb on - strand, within ABID97_RS24055 at 4973.402 kb on + strand at 4973.643 kb on - strand, within ABID97_RS24060 at 4974.125 kb on + strand, within ABID97_RS24065 at 4974.125 kb on + strand, within ABID97_RS24065 at 4974.126 kb on - strand, within ABID97_RS24065 at 4974.126 kb on - strand, within ABID97_RS24065 at 4974.308 kb on + strand, within ABID97_RS24065 at 4974.309 kb on - strand, within ABID97_RS24065 at 4974.309 kb on - strand, within ABID97_RS24065 at 4974.309 kb on - strand, within ABID97_RS24065
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (C) remove 4,972,047 + +0.1 4,972,047 + -0.0 4,972,047 + +0.1 4,972,047 + +0.1 4,972,047 + -0.0 4,972,048 - +0.7 4,972,048 - +0.4 4,972,048 - -0.1 4,972,048 - -0.4 4,972,048 - +0.0 4,972,088 + -0.4 4,972,162 - ABID97_RS24045 0.16 -0.9 4,972,213 + ABID97_RS24045 0.35 -0.4 4,972,312 - ABID97_RS24045 0.71 -1.9 4,972,312 - ABID97_RS24045 0.71 -1.9 4,972,312 - ABID97_RS24045 0.71 -1.4 4,972,413 - -0.7 4,972,413 - +0.9 4,972,417 - +0.3 4,972,417 - -0.0 4,972,417 - -0.7 4,972,711 + -1.8 4,972,711 + -0.1 4,972,796 + +0.3 4,972,922 + ABID97_RS24055 0.19 +0.7 4,972,922 + ABID97_RS24055 0.19 -0.3 4,972,922 + ABID97_RS24055 0.19 -2.2 4,972,923 - ABID97_RS24055 0.19 -1.2 4,973,402 + -1.7 4,973,643 - ABID97_RS24060 0.14 +0.7 4,974,125 + ABID97_RS24065 0.10 -0.1 4,974,125 + ABID97_RS24065 0.10 -0.1 4,974,126 - ABID97_RS24065 0.10 -0.2 4,974,126 - ABID97_RS24065 0.10 -0.0 4,974,308 + ABID97_RS24065 0.45 -0.2 4,974,309 - ABID97_RS24065 0.45 -0.4 4,974,309 - ABID97_RS24065 0.45 +0.1 4,974,309 - ABID97_RS24065 0.45 +0.4
Or see this region's nucleotide sequence