Experiment: L-Leucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS23775 and ABID97_RS23780 overlap by 4 nucleotides ABID97_RS23780 and ABID97_RS23785 are separated by 5 nucleotides ABID97_RS23785 and ABID97_RS23790 overlap by 4 nucleotides
ABID97_RS23775: ABID97_RS23775 - ABC transporter permease, at 4,920,906 to 4,921,856
_RS23775
ABID97_RS23780: ABID97_RS23780 - ABC transporter permease, at 4,921,853 to 4,922,728
_RS23780
ABID97_RS23785: ABID97_RS23785 - ABC transporter ATP-binding protein, at 4,922,734 to 4,923,723
_RS23785
ABID97_RS23790: ABID97_RS23790 - ATP-binding cassette domain-containing protein, at 4,923,720 to 4,924,550
_RS23790
Position (kb) 4921
4922
4923 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 4920.888 kb on + strand at 4920.889 kb on - strand at 4920.889 kb on - strand at 4921.146 kb on + strand, within ABID97_RS23775 at 4921.146 kb on + strand, within ABID97_RS23775 at 4921.146 kb on + strand, within ABID97_RS23775 at 4921.147 kb on - strand, within ABID97_RS23775 at 4921.147 kb on - strand, within ABID97_RS23775 at 4921.152 kb on + strand, within ABID97_RS23775 at 4921.152 kb on + strand, within ABID97_RS23775 at 4921.152 kb on + strand, within ABID97_RS23775 at 4921.153 kb on - strand, within ABID97_RS23775 at 4921.153 kb on - strand, within ABID97_RS23775 at 4921.689 kb on + strand, within ABID97_RS23775 at 4921.689 kb on + strand, within ABID97_RS23775 at 4921.815 kb on + strand at 4921.815 kb on + strand at 4921.852 kb on + strand at 4921.852 kb on + strand at 4921.852 kb on + strand at 4921.852 kb on + strand at 4921.852 kb on + strand at 4921.852 kb on + strand at 4921.852 kb on + strand at 4921.852 kb on + strand at 4921.852 kb on + strand at 4921.853 kb on - strand at 4921.853 kb on - strand at 4921.853 kb on - strand at 4921.853 kb on - strand at 4921.853 kb on - strand at 4921.853 kb on - strand at 4922.075 kb on + strand, within ABID97_RS23780 at 4922.076 kb on - strand, within ABID97_RS23780 at 4922.330 kb on + strand, within ABID97_RS23780 at 4922.330 kb on + strand, within ABID97_RS23780 at 4922.330 kb on + strand, within ABID97_RS23780 at 4922.330 kb on + strand, within ABID97_RS23780 at 4922.331 kb on - strand, within ABID97_RS23780 at 4922.393 kb on + strand, within ABID97_RS23780 at 4922.394 kb on - strand, within ABID97_RS23780 at 4922.394 kb on - strand, within ABID97_RS23780 at 4922.534 kb on + strand, within ABID97_RS23780 at 4922.535 kb on - strand, within ABID97_RS23780 at 4922.727 kb on - strand at 4923.179 kb on - strand, within ABID97_RS23785 at 4923.412 kb on + strand, within ABID97_RS23785 at 4923.412 kb on + strand, within ABID97_RS23785 at 4923.413 kb on - strand, within ABID97_RS23785 at 4923.413 kb on - strand, within ABID97_RS23785 at 4923.475 kb on + strand, within ABID97_RS23785 at 4923.476 kb on - strand, within ABID97_RS23785 at 4923.476 kb on - strand, within ABID97_RS23785 at 4923.607 kb on + strand, within ABID97_RS23785 at 4923.608 kb on - strand, within ABID97_RS23785
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (C) remove 4,920,888 + +2.0 4,920,889 - -0.1 4,920,889 - +0.4 4,921,146 + ABID97_RS23775 0.25 -0.6 4,921,146 + ABID97_RS23775 0.25 -0.3 4,921,146 + ABID97_RS23775 0.25 -1.8 4,921,147 - ABID97_RS23775 0.25 -1.7 4,921,147 - ABID97_RS23775 0.25 -1.1 4,921,152 + ABID97_RS23775 0.26 -0.4 4,921,152 + ABID97_RS23775 0.26 -0.7 4,921,152 + ABID97_RS23775 0.26 -1.5 4,921,153 - ABID97_RS23775 0.26 -1.9 4,921,153 - ABID97_RS23775 0.26 -2.2 4,921,689 + ABID97_RS23775 0.82 -1.2 4,921,689 + ABID97_RS23775 0.82 -1.7 4,921,815 + -2.8 4,921,815 + -2.2 4,921,852 + -1.1 4,921,852 + -0.5 4,921,852 + -0.9 4,921,852 + -0.6 4,921,852 + -0.2 4,921,852 + -0.3 4,921,852 + -0.5 4,921,852 + +0.9 4,921,852 + -0.5 4,921,853 - +0.6 4,921,853 - -0.1 4,921,853 - +0.5 4,921,853 - +0.4 4,921,853 - -0.5 4,921,853 - -1.2 4,922,075 + ABID97_RS23780 0.25 -1.2 4,922,076 - ABID97_RS23780 0.25 -1.0 4,922,330 + ABID97_RS23780 0.54 -1.6 4,922,330 + ABID97_RS23780 0.54 -0.6 4,922,330 + ABID97_RS23780 0.54 -1.7 4,922,330 + ABID97_RS23780 0.54 -0.8 4,922,331 - ABID97_RS23780 0.55 -2.1 4,922,393 + ABID97_RS23780 0.62 -2.8 4,922,394 - ABID97_RS23780 0.62 -2.3 4,922,394 - ABID97_RS23780 0.62 -0.6 4,922,534 + ABID97_RS23780 0.78 -1.8 4,922,535 - ABID97_RS23780 0.78 -1.4 4,922,727 - -0.2 4,923,179 - ABID97_RS23785 0.45 -0.6 4,923,412 + ABID97_RS23785 0.68 -0.3 4,923,412 + ABID97_RS23785 0.68 -1.4 4,923,413 - ABID97_RS23785 0.69 -1.2 4,923,413 - ABID97_RS23785 0.69 -0.7 4,923,475 + ABID97_RS23785 0.75 -0.8 4,923,476 - ABID97_RS23785 0.75 -0.4 4,923,476 - ABID97_RS23785 0.75 +0.1 4,923,607 + ABID97_RS23785 0.88 +0.1 4,923,608 - ABID97_RS23785 0.88 +0.1
Or see this region's nucleotide sequence