Experiment: L-Leucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS22105 and ABID97_RS22110 are separated by 98 nucleotides ABID97_RS22110 and ABID97_RS22115 are separated by 78 nucleotides
ABID97_RS22105: ABID97_RS22105 - ABC transporter ATP-binding protein, at 4,574,244 to 4,575,782
_RS22105
ABID97_RS22110: ABID97_RS22110 - NCS2 family permease, at 4,575,881 to 4,577,287
_RS22110
ABID97_RS22115: ABID97_RS22115 - LysR family transcriptional regulator, at 4,577,366 to 4,578,364
_RS22115
Position (kb)
4575
4576
4577
4578 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4574.891 kb on - strand, within ABID97_RS22105 at 4575.208 kb on + strand, within ABID97_RS22105 at 4575.209 kb on - strand, within ABID97_RS22105 at 4575.409 kb on + strand, within ABID97_RS22105 at 4575.629 kb on - strand at 4575.893 kb on + strand at 4575.894 kb on - strand at 4575.894 kb on - strand at 4575.897 kb on + strand at 4575.897 kb on + strand at 4575.898 kb on - strand at 4575.988 kb on - strand at 4576.026 kb on + strand, within ABID97_RS22110 at 4576.273 kb on - strand, within ABID97_RS22110 at 4576.481 kb on + strand, within ABID97_RS22110 at 4576.482 kb on - strand, within ABID97_RS22110 at 4576.482 kb on - strand, within ABID97_RS22110 at 4576.482 kb on - strand, within ABID97_RS22110 at 4576.917 kb on + strand, within ABID97_RS22110 at 4576.918 kb on - strand, within ABID97_RS22110 at 4576.927 kb on - strand, within ABID97_RS22110 at 4577.085 kb on + strand, within ABID97_RS22110 at 4577.086 kb on - strand, within ABID97_RS22110 at 4577.309 kb on + strand at 4577.309 kb on + strand at 4577.310 kb on - strand at 4577.526 kb on + strand, within ABID97_RS22115 at 4577.527 kb on - strand, within ABID97_RS22115 at 4577.529 kb on + strand, within ABID97_RS22115 at 4577.529 kb on + strand, within ABID97_RS22115 at 4577.529 kb on + strand, within ABID97_RS22115 at 4577.530 kb on - strand, within ABID97_RS22115 at 4577.530 kb on - strand, within ABID97_RS22115 at 4577.937 kb on + strand, within ABID97_RS22115 at 4578.255 kb on + strand, within ABID97_RS22115 at 4578.255 kb on + strand, within ABID97_RS22115 at 4578.255 kb on + strand, within ABID97_RS22115 at 4578.256 kb on - strand, within ABID97_RS22115
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (C) remove 4,574,891 - ABID97_RS22105 0.42 +1.6 4,575,208 + ABID97_RS22105 0.63 +1.8 4,575,209 - ABID97_RS22105 0.63 +0.9 4,575,409 + ABID97_RS22105 0.76 +0.7 4,575,629 - +0.3 4,575,893 + -1.1 4,575,894 - -2.1 4,575,894 - -2.5 4,575,897 + -1.4 4,575,897 + -0.7 4,575,898 - -2.2 4,575,988 - -1.0 4,576,026 + ABID97_RS22110 0.10 +0.3 4,576,273 - ABID97_RS22110 0.28 -1.8 4,576,481 + ABID97_RS22110 0.43 -1.4 4,576,482 - ABID97_RS22110 0.43 -0.7 4,576,482 - ABID97_RS22110 0.43 -1.3 4,576,482 - ABID97_RS22110 0.43 -0.4 4,576,917 + ABID97_RS22110 0.74 +0.8 4,576,918 - ABID97_RS22110 0.74 -0.8 4,576,927 - ABID97_RS22110 0.74 -2.0 4,577,085 + ABID97_RS22110 0.86 -0.9 4,577,086 - ABID97_RS22110 0.86 -1.2 4,577,309 + -1.0 4,577,309 + -1.2 4,577,310 - -1.7 4,577,526 + ABID97_RS22115 0.16 -0.8 4,577,527 - ABID97_RS22115 0.16 -1.0 4,577,529 + ABID97_RS22115 0.16 +1.0 4,577,529 + ABID97_RS22115 0.16 -2.2 4,577,529 + ABID97_RS22115 0.16 -2.2 4,577,530 - ABID97_RS22115 0.16 -1.3 4,577,530 - ABID97_RS22115 0.16 +0.4 4,577,937 + ABID97_RS22115 0.57 -0.6 4,578,255 + ABID97_RS22115 0.89 +2.0 4,578,255 + ABID97_RS22115 0.89 -0.5 4,578,255 + ABID97_RS22115 0.89 +1.1 4,578,256 - ABID97_RS22115 0.89 -0.2
Or see this region's nucleotide sequence