Experiment: L-Leucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS20605 and ABID97_RS20610 are separated by 47 nucleotides ABID97_RS20610 and ABID97_RS20615 overlap by 4 nucleotides ABID97_RS20615 and ABID97_RS20620 are separated by 102 nucleotides
ABID97_RS20605: ABID97_RS20605 - molybdopterin-dependent oxidoreductase, at 4,255,195 to 4,257,990
_RS20605
ABID97_RS20610: ABID97_RS20610 - DNA-binding protein YbiB, at 4,258,038 to 4,258,943
_RS20610
ABID97_RS20615: ABID97_RS20615 - uroporphyrinogen-III C-methyltransferase, at 4,258,940 to 4,259,752
_RS20615
ABID97_RS20620: ABID97_RS20620 - ABC transporter ATP-binding protein, at 4,259,855 to 4,260,958
_RS20620
Position (kb) 4258
4259 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 4257.208 kb on + strand, within ABID97_RS20605 at 4257.209 kb on - strand, within ABID97_RS20605 at 4257.989 kb on - strand at 4257.989 kb on - strand at 4258.011 kb on - strand at 4258.053 kb on + strand at 4258.053 kb on + strand at 4258.053 kb on + strand at 4258.054 kb on - strand at 4258.054 kb on - strand at 4258.054 kb on - strand at 4258.294 kb on - strand, within ABID97_RS20610 at 4258.620 kb on + strand, within ABID97_RS20610 at 4258.620 kb on + strand, within ABID97_RS20610 at 4258.834 kb on + strand, within ABID97_RS20610 at 4258.834 kb on + strand, within ABID97_RS20610 at 4258.851 kb on + strand, within ABID97_RS20610 at 4258.851 kb on + strand, within ABID97_RS20610 at 4258.851 kb on + strand, within ABID97_RS20610 at 4259.100 kb on - strand, within ABID97_RS20615 at 4259.495 kb on + strand, within ABID97_RS20615 at 4259.495 kb on + strand, within ABID97_RS20615 at 4259.495 kb on + strand, within ABID97_RS20615 at 4259.496 kb on - strand, within ABID97_RS20615 at 4259.496 kb on - strand, within ABID97_RS20615 at 4259.496 kb on - strand, within ABID97_RS20615 at 4259.915 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (C) remove 4,257,208 + ABID97_RS20605 0.72 +0.2 4,257,209 - ABID97_RS20605 0.72 +0.3 4,257,989 - -0.3 4,257,989 - -0.4 4,258,011 - -0.4 4,258,053 + -3.1 4,258,053 + -1.3 4,258,053 + -1.7 4,258,054 - -3.1 4,258,054 - -3.3 4,258,054 - -4.6 4,258,294 - ABID97_RS20610 0.28 -0.8 4,258,620 + ABID97_RS20610 0.64 -2.3 4,258,620 + ABID97_RS20610 0.64 -0.6 4,258,834 + ABID97_RS20610 0.88 -1.7 4,258,834 + ABID97_RS20610 0.88 -0.9 4,258,851 + ABID97_RS20610 0.90 -1.6 4,258,851 + ABID97_RS20610 0.90 -1.3 4,258,851 + ABID97_RS20610 0.90 -1.7 4,259,100 - ABID97_RS20615 0.20 -5.6 4,259,495 + ABID97_RS20615 0.68 -4.4 4,259,495 + ABID97_RS20615 0.68 -4.0 4,259,495 + ABID97_RS20615 0.68 -5.0 4,259,496 - ABID97_RS20615 0.68 -3.8 4,259,496 - ABID97_RS20615 0.68 -5.5 4,259,496 - ABID97_RS20615 0.68 -3.0 4,259,915 + +0.8
Or see this region's nucleotide sequence