Experiment: L-Leucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS17890 and ABID97_RS17895 are separated by 19 nucleotides ABID97_RS17895 and ABID97_RS17900 are separated by 33 nucleotides ABID97_RS17900 and ABID97_RS17905 overlap by 4 nucleotides ABID97_RS17905 and ABID97_RS17910 overlap by 4 nucleotides
ABID97_RS17890: ABID97_RS17890 - serine hydroxymethyltransferase, at 3,697,900 to 3,699,144
_RS17890
ABID97_RS17895: ABID97_RS17895 - transcriptional regulator NrdR, at 3,699,164 to 3,699,607
_RS17895
ABID97_RS17900: ABID97_RS17900 - GspH/FimT family pseudopilin, at 3,699,641 to 3,700,171
_RS17900
ABID97_RS17905: ABID97_RS17905 - type IV pilin protein, at 3,700,168 to 3,700,593
_RS17905
ABID97_RS17910: ABID97_RS17910 - PilC/PilY family type IV pilus protein, at 3,700,590 to 3,703,736
_RS17910
Position (kb)
3699
3700 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3699.284 kb on + strand, within ABID97_RS17895 at 3699.284 kb on + strand, within ABID97_RS17895 at 3699.285 kb on - strand, within ABID97_RS17895 at 3699.285 kb on - strand, within ABID97_RS17895 at 3699.285 kb on - strand, within ABID97_RS17895 at 3699.533 kb on + strand, within ABID97_RS17895 at 3699.533 kb on + strand, within ABID97_RS17895 at 3699.533 kb on + strand, within ABID97_RS17895 at 3699.534 kb on - strand, within ABID97_RS17895 at 3699.534 kb on - strand, within ABID97_RS17895 at 3699.534 kb on - strand, within ABID97_RS17895 at 3700.285 kb on + strand, within ABID97_RS17905 at 3700.286 kb on - strand, within ABID97_RS17905 at 3700.337 kb on + strand, within ABID97_RS17905 at 3700.385 kb on + strand, within ABID97_RS17905 at 3700.385 kb on + strand, within ABID97_RS17905 at 3700.385 kb on + strand, within ABID97_RS17905 at 3700.385 kb on + strand, within ABID97_RS17905 at 3700.386 kb on - strand, within ABID97_RS17905 at 3700.401 kb on + strand, within ABID97_RS17905 at 3700.403 kb on + strand, within ABID97_RS17905 at 3700.404 kb on - strand, within ABID97_RS17905 at 3700.484 kb on + strand, within ABID97_RS17905
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (C) remove 3,699,284 + ABID97_RS17895 0.27 -2.8 3,699,284 + ABID97_RS17895 0.27 -1.4 3,699,285 - ABID97_RS17895 0.27 -2.3 3,699,285 - ABID97_RS17895 0.27 -1.1 3,699,285 - ABID97_RS17895 0.27 -0.2 3,699,533 + ABID97_RS17895 0.83 -1.5 3,699,533 + ABID97_RS17895 0.83 -1.2 3,699,533 + ABID97_RS17895 0.83 -2.2 3,699,534 - ABID97_RS17895 0.83 -1.0 3,699,534 - ABID97_RS17895 0.83 -3.0 3,699,534 - ABID97_RS17895 0.83 -2.4 3,700,285 + ABID97_RS17905 0.27 -0.5 3,700,286 - ABID97_RS17905 0.28 +0.1 3,700,337 + ABID97_RS17905 0.40 -0.1 3,700,385 + ABID97_RS17905 0.51 +0.4 3,700,385 + ABID97_RS17905 0.51 +0.2 3,700,385 + ABID97_RS17905 0.51 -0.4 3,700,385 + ABID97_RS17905 0.51 -1.2 3,700,386 - ABID97_RS17905 0.51 -0.4 3,700,401 + ABID97_RS17905 0.55 -0.1 3,700,403 + ABID97_RS17905 0.55 -0.4 3,700,404 - ABID97_RS17905 0.55 -2.1 3,700,484 + ABID97_RS17905 0.74 -0.0
Or see this region's nucleotide sequence