Experiment: L-Leucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS16700 and ABID97_RS16705 are separated by 9 nucleotides ABID97_RS16705 and ABID97_RS16710 are separated by 14 nucleotides ABID97_RS16710 and ABID97_RS16715 overlap by 4 nucleotides
ABID97_RS16700: ABID97_RS16700 - lipid A export permease/ATP-binding protein MsbA, at 3,455,748 to 3,457,532
_RS16700
ABID97_RS16705: ABID97_RS16705 - ribonuclease G, at 3,457,542 to 3,459,068
_RS16705
ABID97_RS16710: ABID97_RS16710 - Maf family nucleotide pyrophosphatase, at 3,459,083 to 3,459,691
_RS16710
ABID97_RS16715: ABID97_RS16715 - 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH, at 3,459,688 to 3,460,155
_RS16715
Position (kb)
3457
3458
3459
3460 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 3457.561 kb on + strand at 3457.728 kb on + strand, within ABID97_RS16705 at 3457.747 kb on + strand, within ABID97_RS16705 at 3458.141 kb on - strand, within ABID97_RS16705 at 3458.203 kb on + strand, within ABID97_RS16705 at 3458.203 kb on + strand, within ABID97_RS16705 at 3458.204 kb on - strand, within ABID97_RS16705 at 3458.233 kb on + strand, within ABID97_RS16705 at 3458.233 kb on + strand, within ABID97_RS16705 at 3458.234 kb on - strand, within ABID97_RS16705 at 3458.234 kb on - strand, within ABID97_RS16705 at 3458.234 kb on - strand, within ABID97_RS16705 at 3458.234 kb on - strand, within ABID97_RS16705 at 3458.266 kb on + strand, within ABID97_RS16705 at 3458.266 kb on + strand, within ABID97_RS16705 at 3458.266 kb on + strand, within ABID97_RS16705 at 3458.266 kb on + strand, within ABID97_RS16705 at 3458.266 kb on + strand, within ABID97_RS16705 at 3458.266 kb on + strand, within ABID97_RS16705 at 3458.267 kb on - strand, within ABID97_RS16705 at 3458.267 kb on - strand, within ABID97_RS16705 at 3458.267 kb on - strand, within ABID97_RS16705 at 3458.267 kb on - strand, within ABID97_RS16705 at 3458.267 kb on - strand, within ABID97_RS16705 at 3458.267 kb on - strand, within ABID97_RS16705 at 3458.267 kb on - strand, within ABID97_RS16705 at 3458.449 kb on + strand, within ABID97_RS16705 at 3458.449 kb on + strand, within ABID97_RS16705 at 3458.450 kb on - strand, within ABID97_RS16705 at 3458.450 kb on - strand, within ABID97_RS16705 at 3458.947 kb on + strand at 3458.947 kb on + strand at 3458.947 kb on + strand at 3458.948 kb on - strand at 3458.948 kb on - strand at 3458.948 kb on - strand at 3458.948 kb on - strand at 3458.948 kb on - strand at 3458.948 kb on - strand at 3459.070 kb on + strand at 3459.089 kb on - strand at 3459.154 kb on - strand, within ABID97_RS16710 at 3459.204 kb on + strand, within ABID97_RS16710 at 3459.243 kb on + strand, within ABID97_RS16710 at 3459.244 kb on - strand, within ABID97_RS16710 at 3459.534 kb on + strand, within ABID97_RS16710 at 3459.535 kb on - strand, within ABID97_RS16710 at 3459.669 kb on + strand at 3459.669 kb on + strand at 3459.669 kb on + strand at 3459.669 kb on + strand at 3459.669 kb on + strand at 3459.735 kb on - strand, within ABID97_RS16715 at 3460.001 kb on + strand, within ABID97_RS16715 at 3460.001 kb on + strand, within ABID97_RS16715 at 3460.002 kb on - strand, within ABID97_RS16715
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (C) remove 3,457,561 + -3.5 3,457,728 + ABID97_RS16705 0.12 -1.4 3,457,747 + ABID97_RS16705 0.13 -3.0 3,458,141 - ABID97_RS16705 0.39 -3.6 3,458,203 + ABID97_RS16705 0.43 -1.8 3,458,203 + ABID97_RS16705 0.43 -2.3 3,458,204 - ABID97_RS16705 0.43 -1.3 3,458,233 + ABID97_RS16705 0.45 -3.8 3,458,233 + ABID97_RS16705 0.45 -2.2 3,458,234 - ABID97_RS16705 0.45 -3.4 3,458,234 - ABID97_RS16705 0.45 -1.9 3,458,234 - ABID97_RS16705 0.45 -1.0 3,458,234 - ABID97_RS16705 0.45 -4.3 3,458,266 + ABID97_RS16705 0.47 -2.6 3,458,266 + ABID97_RS16705 0.47 -2.3 3,458,266 + ABID97_RS16705 0.47 -3.3 3,458,266 + ABID97_RS16705 0.47 -2.1 3,458,266 + ABID97_RS16705 0.47 -2.3 3,458,266 + ABID97_RS16705 0.47 -3.4 3,458,267 - ABID97_RS16705 0.47 -3.9 3,458,267 - ABID97_RS16705 0.47 -1.3 3,458,267 - ABID97_RS16705 0.47 -4.6 3,458,267 - ABID97_RS16705 0.47 -2.2 3,458,267 - ABID97_RS16705 0.47 -2.0 3,458,267 - ABID97_RS16705 0.47 -2.6 3,458,267 - ABID97_RS16705 0.47 -2.5 3,458,449 + ABID97_RS16705 0.59 -2.9 3,458,449 + ABID97_RS16705 0.59 -3.0 3,458,450 - ABID97_RS16705 0.59 -2.5 3,458,450 - ABID97_RS16705 0.59 -2.1 3,458,947 + -1.2 3,458,947 + -3.3 3,458,947 + -1.3 3,458,948 - -2.0 3,458,948 - -1.8 3,458,948 - -3.1 3,458,948 - -2.7 3,458,948 - -3.5 3,458,948 - -1.7 3,459,070 + +0.8 3,459,089 - -0.5 3,459,154 - ABID97_RS16710 0.12 -0.0 3,459,204 + ABID97_RS16710 0.20 -0.3 3,459,243 + ABID97_RS16710 0.26 +1.1 3,459,244 - ABID97_RS16710 0.26 -0.3 3,459,534 + ABID97_RS16710 0.74 +0.1 3,459,535 - ABID97_RS16710 0.74 -0.9 3,459,669 + +0.4 3,459,669 + +0.3 3,459,669 + +0.0 3,459,669 + -0.2 3,459,669 + -0.3 3,459,735 - ABID97_RS16715 0.10 -0.2 3,460,001 + ABID97_RS16715 0.67 +0.5 3,460,001 + ABID97_RS16715 0.67 +0.4 3,460,002 - ABID97_RS16715 0.67 +2.0
Or see this region's nucleotide sequence