Experiment: L-Leucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS15700 and ABID97_RS15705 are separated by 168 nucleotides ABID97_RS15705 and ABID97_RS15710 are separated by 122 nucleotides
ABID97_RS15700: ABID97_RS15700 - protein adenylyltransferase SelO, at 3,249,210 to 3,250,691
_RS15700
ABID97_RS15705: ABID97_RS15705 - 3-(methylthio)propionyl-CoA ligase, at 3,250,860 to 3,252,503
_RS15705
ABID97_RS15710: ABID97_RS15710 - branched-chain amino acid ABC transporter substrate-binding protein, at 3,252,626 to 3,253,855
_RS15710
Position (kb)
3250
3251
3252
3253 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3249.880 kb on + strand, within ABID97_RS15700 at 3250.066 kb on + strand, within ABID97_RS15700 at 3250.066 kb on + strand, within ABID97_RS15700 at 3250.067 kb on - strand, within ABID97_RS15700 at 3250.067 kb on - strand, within ABID97_RS15700 at 3250.321 kb on + strand, within ABID97_RS15700 at 3250.321 kb on + strand, within ABID97_RS15700 at 3250.322 kb on - strand, within ABID97_RS15700 at 3250.438 kb on + strand, within ABID97_RS15700 at 3250.439 kb on - strand, within ABID97_RS15700 at 3250.827 kb on - strand at 3251.100 kb on + strand, within ABID97_RS15705 at 3251.100 kb on + strand, within ABID97_RS15705 at 3251.100 kb on + strand, within ABID97_RS15705 at 3251.101 kb on - strand, within ABID97_RS15705 at 3251.103 kb on + strand, within ABID97_RS15705 at 3251.103 kb on + strand, within ABID97_RS15705 at 3251.103 kb on + strand, within ABID97_RS15705 at 3251.413 kb on - strand, within ABID97_RS15705 at 3251.814 kb on + strand, within ABID97_RS15705 at 3251.814 kb on + strand, within ABID97_RS15705 at 3251.814 kb on + strand, within ABID97_RS15705 at 3251.815 kb on - strand, within ABID97_RS15705 at 3251.815 kb on - strand, within ABID97_RS15705 at 3252.057 kb on + strand, within ABID97_RS15705 at 3252.367 kb on - strand at 3252.395 kb on - strand at 3252.588 kb on - strand at 3252.649 kb on - strand at 3253.146 kb on - strand, within ABID97_RS15710 at 3253.163 kb on + strand, within ABID97_RS15710 at 3253.190 kb on + strand, within ABID97_RS15710 at 3253.284 kb on - strand, within ABID97_RS15710 at 3253.406 kb on + strand, within ABID97_RS15710 at 3253.406 kb on + strand, within ABID97_RS15710 at 3253.485 kb on - strand, within ABID97_RS15710
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (C) remove 3,249,880 + ABID97_RS15700 0.45 +0.1 3,250,066 + ABID97_RS15700 0.58 -1.1 3,250,066 + ABID97_RS15700 0.58 -1.1 3,250,067 - ABID97_RS15700 0.58 -0.6 3,250,067 - ABID97_RS15700 0.58 +0.2 3,250,321 + ABID97_RS15700 0.75 -0.0 3,250,321 + ABID97_RS15700 0.75 -0.2 3,250,322 - ABID97_RS15700 0.75 -1.3 3,250,438 + ABID97_RS15700 0.83 +0.2 3,250,439 - ABID97_RS15700 0.83 -0.1 3,250,827 - -0.0 3,251,100 + ABID97_RS15705 0.15 +1.6 3,251,100 + ABID97_RS15705 0.15 +1.1 3,251,100 + ABID97_RS15705 0.15 +0.7 3,251,101 - ABID97_RS15705 0.15 +0.7 3,251,103 + ABID97_RS15705 0.15 +1.6 3,251,103 + ABID97_RS15705 0.15 -2.3 3,251,103 + ABID97_RS15705 0.15 +0.6 3,251,413 - ABID97_RS15705 0.34 +1.6 3,251,814 + ABID97_RS15705 0.58 -0.3 3,251,814 + ABID97_RS15705 0.58 +0.3 3,251,814 + ABID97_RS15705 0.58 +0.6 3,251,815 - ABID97_RS15705 0.58 +0.3 3,251,815 - ABID97_RS15705 0.58 -0.0 3,252,057 + ABID97_RS15705 0.73 -0.1 3,252,367 - +0.8 3,252,395 - -0.1 3,252,588 - -1.2 3,252,649 - -0.9 3,253,146 - ABID97_RS15710 0.42 -0.0 3,253,163 + ABID97_RS15710 0.44 -0.5 3,253,190 + ABID97_RS15710 0.46 -0.2 3,253,284 - ABID97_RS15710 0.53 -0.1 3,253,406 + ABID97_RS15710 0.63 +0.1 3,253,406 + ABID97_RS15710 0.63 +2.2 3,253,485 - ABID97_RS15710 0.70 -0.3
Or see this region's nucleotide sequence