Experiment: L-Leucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS15585 and ABID97_RS15590 overlap by 4 nucleotides ABID97_RS15590 and ABID97_RS15595 are separated by 9 nucleotides ABID97_RS15595 and ABID97_RS15600 are separated by 73 nucleotides
ABID97_RS15585: ABID97_RS15585 - sulfate ABC transporter ATP-binding protein, at 3,221,098 to 3,222,195
_RS15585
ABID97_RS15590: ABID97_RS15590 - disulfide bond formation protein B, at 3,222,192 to 3,222,698
_RS15590
ABID97_RS15595: ABID97_RS15595 - mobilization protein, at 3,222,708 to 3,223,400
_RS15595
ABID97_RS15600: ABID97_RS15600 - type II toxin-antitoxin system HipA family toxin, at 3,223,474 to 3,224,772
_RS15600
Position (kb)
3222
3223 Strain fitness (log2 ratio)
-2
-1
0
1 at 3221.344 kb on + strand, within ABID97_RS15585 at 3221.345 kb on - strand, within ABID97_RS15585 at 3221.920 kb on + strand, within ABID97_RS15585 at 3221.920 kb on + strand, within ABID97_RS15585 at 3221.921 kb on - strand, within ABID97_RS15585 at 3221.921 kb on - strand, within ABID97_RS15585 at 3221.954 kb on - strand, within ABID97_RS15585 at 3222.170 kb on + strand at 3222.276 kb on + strand, within ABID97_RS15590 at 3222.442 kb on - strand, within ABID97_RS15590 at 3222.709 kb on + strand at 3222.979 kb on + strand, within ABID97_RS15595 at 3222.979 kb on + strand, within ABID97_RS15595 at 3222.979 kb on + strand, within ABID97_RS15595 at 3222.979 kb on + strand, within ABID97_RS15595 at 3222.980 kb on - strand, within ABID97_RS15595 at 3222.980 kb on - strand, within ABID97_RS15595 at 3222.980 kb on - strand, within ABID97_RS15595 at 3223.253 kb on - strand, within ABID97_RS15595 at 3223.475 kb on + strand at 3223.476 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (C) remove 3,221,344 + ABID97_RS15585 0.22 -1.9 3,221,345 - ABID97_RS15585 0.22 -0.2 3,221,920 + ABID97_RS15585 0.75 -0.8 3,221,920 + ABID97_RS15585 0.75 -1.6 3,221,921 - ABID97_RS15585 0.75 -0.4 3,221,921 - ABID97_RS15585 0.75 -0.9 3,221,954 - ABID97_RS15585 0.78 -1.2 3,222,170 + +0.6 3,222,276 + ABID97_RS15590 0.17 -2.0 3,222,442 - ABID97_RS15590 0.49 -1.7 3,222,709 + +0.3 3,222,979 + ABID97_RS15595 0.39 +0.2 3,222,979 + ABID97_RS15595 0.39 -0.4 3,222,979 + ABID97_RS15595 0.39 -0.2 3,222,979 + ABID97_RS15595 0.39 -0.3 3,222,980 - ABID97_RS15595 0.39 -0.6 3,222,980 - ABID97_RS15595 0.39 -0.1 3,222,980 - ABID97_RS15595 0.39 +0.2 3,223,253 - ABID97_RS15595 0.79 -0.4 3,223,475 + -0.0 3,223,476 - -0.0
Or see this region's nucleotide sequence