Experiment: L-Leucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS15365 and ABID97_RS15370 are separated by 43 nucleotides ABID97_RS15370 and ABID97_RS15375 are separated by 21 nucleotides ABID97_RS15375 and ABID97_RS15380 overlap by 4 nucleotides
ABID97_RS15365: ABID97_RS15365 - sulfate adenylyltransferase subunit CysD, at 3,178,518 to 3,179,471
_RS15365
ABID97_RS15370: ABID97_RS15370 - phosphoadenosine phosphosulfate reductase family protein, at 3,179,515 to 3,180,147
_RS15370
ABID97_RS15375: ABID97_RS15375 - DUF934 domain-containing protein, at 3,180,169 to 3,180,564
_RS15375
ABID97_RS15380: ABID97_RS15380 - nitrite/sulfite reductase, at 3,180,561 to 3,182,339
_RS15380
Position (kb)
3180
3181 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 3179.574 kb on - strand at 3179.609 kb on + strand, within ABID97_RS15370 at 3179.609 kb on + strand, within ABID97_RS15370 at 3179.615 kb on + strand, within ABID97_RS15370 at 3179.615 kb on + strand, within ABID97_RS15370 at 3179.615 kb on + strand, within ABID97_RS15370 at 3179.616 kb on - strand, within ABID97_RS15370 at 3179.616 kb on - strand, within ABID97_RS15370 at 3179.616 kb on - strand, within ABID97_RS15370 at 3179.616 kb on - strand, within ABID97_RS15370 at 3179.879 kb on + strand, within ABID97_RS15370 at 3179.879 kb on + strand, within ABID97_RS15370 at 3179.879 kb on + strand, within ABID97_RS15370 at 3179.880 kb on - strand, within ABID97_RS15370 at 3179.880 kb on - strand, within ABID97_RS15370 at 3179.931 kb on - strand, within ABID97_RS15370 at 3180.218 kb on + strand, within ABID97_RS15375 at 3180.218 kb on + strand, within ABID97_RS15375 at 3180.218 kb on + strand, within ABID97_RS15375 at 3180.219 kb on - strand, within ABID97_RS15375 at 3180.219 kb on - strand, within ABID97_RS15375 at 3180.676 kb on + strand at 3181.486 kb on + strand, within ABID97_RS15380 at 3181.486 kb on + strand, within ABID97_RS15380 at 3181.487 kb on - strand, within ABID97_RS15380 at 3181.487 kb on - strand, within ABID97_RS15380 at 3181.531 kb on + strand, within ABID97_RS15380 at 3181.532 kb on - strand, within ABID97_RS15380 at 3181.532 kb on - strand, within ABID97_RS15380
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (C) remove 3,179,574 - -2.5 3,179,609 + ABID97_RS15370 0.15 -3.3 3,179,609 + ABID97_RS15370 0.15 -2.4 3,179,615 + ABID97_RS15370 0.16 -3.0 3,179,615 + ABID97_RS15370 0.16 -3.4 3,179,615 + ABID97_RS15370 0.16 -2.5 3,179,616 - ABID97_RS15370 0.16 -2.0 3,179,616 - ABID97_RS15370 0.16 -4.2 3,179,616 - ABID97_RS15370 0.16 -3.3 3,179,616 - ABID97_RS15370 0.16 -3.7 3,179,879 + ABID97_RS15370 0.58 -2.5 3,179,879 + ABID97_RS15370 0.58 -3.2 3,179,879 + ABID97_RS15370 0.58 -2.4 3,179,880 - ABID97_RS15370 0.58 -3.4 3,179,880 - ABID97_RS15370 0.58 -3.6 3,179,931 - ABID97_RS15370 0.66 -0.9 3,180,218 + ABID97_RS15375 0.12 -4.3 3,180,218 + ABID97_RS15375 0.12 -4.9 3,180,218 + ABID97_RS15375 0.12 -1.0 3,180,219 - ABID97_RS15375 0.13 -4.8 3,180,219 - ABID97_RS15375 0.13 -4.8 3,180,676 + -4.3 3,181,486 + ABID97_RS15380 0.52 -2.6 3,181,486 + ABID97_RS15380 0.52 -2.2 3,181,487 - ABID97_RS15380 0.52 -5.0 3,181,487 - ABID97_RS15380 0.52 -5.1 3,181,531 + ABID97_RS15380 0.55 -4.1 3,181,532 - ABID97_RS15380 0.55 -3.2 3,181,532 - ABID97_RS15380 0.55 -5.7
Or see this region's nucleotide sequence