Strain Fitness in Variovorax sp. OAS795 around ABID97_RS14750

Experiment: L-Leucine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABID97_RS14745 and ABID97_RS14750 overlap by 4 nucleotidesABID97_RS14750 and ABID97_RS14755 overlap by 4 nucleotides ABID97_RS14745: ABID97_RS14745 - gephyrin-like molybdotransferase Glp, at 3,066,377 to 3,067,699 _RS14745 ABID97_RS14750: ABID97_RS14750 - molybdenum cofactor guanylyltransferase MobA, at 3,067,696 to 3,068,343 _RS14750 ABID97_RS14755: ABID97_RS14755 - 'GTP 3',8-cyclase MoaA' pseudo=_no_value transl_table=11, at 3,068,340 to 3,069,495 _RS14755 Position (kb) 3067 3068 3069Strain fitness (log2 ratio) -1 0 1at 3067.020 kb on + strand, within ABID97_RS14745at 3067.021 kb on - strand, within ABID97_RS14745at 3067.035 kb on + strand, within ABID97_RS14745at 3067.036 kb on - strand, within ABID97_RS14745at 3067.095 kb on + strand, within ABID97_RS14745at 3067.095 kb on + strand, within ABID97_RS14745at 3067.095 kb on + strand, within ABID97_RS14745at 3067.096 kb on - strand, within ABID97_RS14745at 3067.096 kb on - strand, within ABID97_RS14745at 3067.096 kb on - strand, within ABID97_RS14745at 3068.045 kb on + strand, within ABID97_RS14750at 3068.045 kb on + strand, within ABID97_RS14750at 3068.045 kb on + strand, within ABID97_RS14750at 3068.046 kb on - strand, within ABID97_RS14750at 3068.046 kb on - strand, within ABID97_RS14750at 3068.046 kb on - strand, within ABID97_RS14750at 3068.099 kb on + strand, within ABID97_RS14750at 3068.100 kb on - strand, within ABID97_RS14750at 3068.353 kb on + strandat 3068.353 kb on + strandat 3068.354 kb on - strandat 3068.354 kb on - strandat 3068.354 kb on - strandat 3068.354 kb on - strandat 3068.354 kb on - strandat 3068.558 kb on + strand, within ABID97_RS14755at 3068.558 kb on + strand, within ABID97_RS14755at 3068.559 kb on - strand, within ABID97_RS14755at 3068.798 kb on + strand, within ABID97_RS14755at 3068.798 kb on + strand, within ABID97_RS14755at 3068.798 kb on + strand, within ABID97_RS14755at 3068.799 kb on - strand, within ABID97_RS14755at 3068.799 kb on - strand, within ABID97_RS14755at 3068.847 kb on - strand, within ABID97_RS14755at 3068.863 kb on + strand, within ABID97_RS14755at 3068.864 kb on - strand, within ABID97_RS14755at 3069.282 kb on - strand, within ABID97_RS14755at 3069.321 kb on - strand, within ABID97_RS14755at 3069.321 kb on - strand, within ABID97_RS14755at 3069.321 kb on - strand, within ABID97_RS14755at 3069.321 kb on - strand, within ABID97_RS14755

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Leucine (C)
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3,067,020 + ABID97_RS14745 0.49 +1.0
3,067,021 - ABID97_RS14745 0.49 -0.2
3,067,035 + ABID97_RS14745 0.50 -0.6
3,067,036 - ABID97_RS14745 0.50 -0.8
3,067,095 + ABID97_RS14745 0.54 -0.0
3,067,095 + ABID97_RS14745 0.54 -0.3
3,067,095 + ABID97_RS14745 0.54 +0.1
3,067,096 - ABID97_RS14745 0.54 -0.3
3,067,096 - ABID97_RS14745 0.54 +0.2
3,067,096 - ABID97_RS14745 0.54 +1.0
3,068,045 + ABID97_RS14750 0.54 +0.3
3,068,045 + ABID97_RS14750 0.54 -0.0
3,068,045 + ABID97_RS14750 0.54 +0.6
3,068,046 - ABID97_RS14750 0.54 -0.3
3,068,046 - ABID97_RS14750 0.54 +0.0
3,068,046 - ABID97_RS14750 0.54 -1.3
3,068,099 + ABID97_RS14750 0.62 -0.4
3,068,100 - ABID97_RS14750 0.62 +0.0
3,068,353 + -1.4
3,068,353 + -0.3
3,068,354 - -0.6
3,068,354 - +1.6
3,068,354 - -0.1
3,068,354 - -0.6
3,068,354 - -0.2
3,068,558 + ABID97_RS14755 0.19 -0.7
3,068,558 + ABID97_RS14755 0.19 +0.4
3,068,559 - ABID97_RS14755 0.19 -0.9
3,068,798 + ABID97_RS14755 0.40 +1.6
3,068,798 + ABID97_RS14755 0.40 -1.2
3,068,798 + ABID97_RS14755 0.40 -0.7
3,068,799 - ABID97_RS14755 0.40 +0.1
3,068,799 - ABID97_RS14755 0.40 -0.7
3,068,847 - ABID97_RS14755 0.44 -0.2
3,068,863 + ABID97_RS14755 0.45 +0.0
3,068,864 - ABID97_RS14755 0.45 -0.7
3,069,282 - ABID97_RS14755 0.81 -1.2
3,069,321 - ABID97_RS14755 0.85 -1.6
3,069,321 - ABID97_RS14755 0.85 -0.5
3,069,321 - ABID97_RS14755 0.85 +0.6
3,069,321 - ABID97_RS14755 0.85 +0.1

Or see this region's nucleotide sequence