Experiment: L-Leucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS13915 and ABID97_RS13920 are separated by 145 nucleotides ABID97_RS13920 and ABID97_RS13925 are separated by 5 nucleotides ABID97_RS13925 and ABID97_RS13930 are separated by 126 nucleotides
ABID97_RS13915: ABID97_RS13915 - tRNA dihydrouridine(20/20a) synthase DusA, at 2,889,783 to 2,890,823
_RS13915
ABID97_RS13920: ABID97_RS13920 - IclR family transcriptional regulator, at 2,890,969 to 2,891,754
_RS13920
ABID97_RS13925: ABID97_RS13925 - GntR family transcriptional regulator, at 2,891,760 to 2,892,407
_RS13925
ABID97_RS13930: ABID97_RS13930 - methylmalonyl-CoA mutase, at 2,892,534 to 2,894,696
_RS13930
Position (kb)
2891
2892
2893 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2890.834 kb on + strand at 2890.835 kb on - strand at 2890.835 kb on - strand at 2890.874 kb on + strand at 2890.875 kb on - strand at 2890.890 kb on + strand at 2890.952 kb on - strand at 2890.955 kb on - strand at 2891.144 kb on - strand, within ABID97_RS13920 at 2891.144 kb on - strand, within ABID97_RS13920 at 2891.213 kb on - strand, within ABID97_RS13920 at 2891.534 kb on - strand, within ABID97_RS13920 at 2891.548 kb on + strand, within ABID97_RS13920 at 2891.548 kb on + strand, within ABID97_RS13920 at 2891.549 kb on - strand, within ABID97_RS13920 at 2891.626 kb on + strand, within ABID97_RS13920 at 2891.627 kb on - strand, within ABID97_RS13920 at 2891.753 kb on - strand at 2891.762 kb on - strand at 2892.154 kb on + strand, within ABID97_RS13925 at 2892.193 kb on + strand, within ABID97_RS13925 at 2892.280 kb on + strand, within ABID97_RS13925 at 2892.280 kb on + strand, within ABID97_RS13925 at 2892.281 kb on - strand, within ABID97_RS13925 at 2892.373 kb on + strand at 2892.373 kb on + strand at 2892.374 kb on - strand at 2892.374 kb on - strand at 2892.419 kb on - strand at 2892.460 kb on - strand at 2892.504 kb on - strand at 2892.672 kb on + strand at 2892.672 kb on + strand at 2892.672 kb on + strand at 2892.673 kb on - strand at 2892.702 kb on + strand at 2892.703 kb on - strand at 2892.732 kb on + strand at 2892.759 kb on + strand, within ABID97_RS13930 at 2892.759 kb on + strand, within ABID97_RS13930 at 2892.759 kb on + strand, within ABID97_RS13930 at 2892.760 kb on - strand, within ABID97_RS13930 at 2892.828 kb on + strand, within ABID97_RS13930 at 2892.828 kb on + strand, within ABID97_RS13930 at 2892.829 kb on - strand, within ABID97_RS13930 at 2893.056 kb on + strand, within ABID97_RS13930 at 2893.152 kb on + strand, within ABID97_RS13930 at 2893.152 kb on + strand, within ABID97_RS13930 at 2893.152 kb on + strand, within ABID97_RS13930 at 2893.153 kb on - strand, within ABID97_RS13930 at 2893.153 kb on - strand, within ABID97_RS13930 at 2893.153 kb on - strand, within ABID97_RS13930 at 2893.153 kb on - strand, within ABID97_RS13930 at 2893.203 kb on + strand, within ABID97_RS13930 at 2893.321 kb on - strand, within ABID97_RS13930
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (C) remove 2,890,834 + -0.8 2,890,835 - +0.6 2,890,835 - +0.2 2,890,874 + -0.3 2,890,875 - -0.2 2,890,890 + +0.6 2,890,952 - +1.0 2,890,955 - -0.0 2,891,144 - ABID97_RS13920 0.22 +0.1 2,891,144 - ABID97_RS13920 0.22 -0.1 2,891,213 - ABID97_RS13920 0.31 +1.5 2,891,534 - ABID97_RS13920 0.72 +0.2 2,891,548 + ABID97_RS13920 0.74 +1.0 2,891,548 + ABID97_RS13920 0.74 +0.6 2,891,549 - ABID97_RS13920 0.74 +0.7 2,891,626 + ABID97_RS13920 0.84 +0.7 2,891,627 - ABID97_RS13920 0.84 +0.1 2,891,753 - -0.0 2,891,762 - +2.4 2,892,154 + ABID97_RS13925 0.61 -1.0 2,892,193 + ABID97_RS13925 0.67 -1.3 2,892,280 + ABID97_RS13925 0.80 -1.0 2,892,280 + ABID97_RS13925 0.80 -0.4 2,892,281 - ABID97_RS13925 0.80 -1.1 2,892,373 + -0.3 2,892,373 + -1.2 2,892,374 - -0.2 2,892,374 - +0.3 2,892,419 - +0.3 2,892,460 - -0.7 2,892,504 - -0.7 2,892,672 + -2.3 2,892,672 + -0.6 2,892,672 + -0.1 2,892,673 - -0.2 2,892,702 + -0.6 2,892,703 - +0.6 2,892,732 + -1.3 2,892,759 + ABID97_RS13930 0.10 -0.4 2,892,759 + ABID97_RS13930 0.10 +1.2 2,892,759 + ABID97_RS13930 0.10 -1.0 2,892,760 - ABID97_RS13930 0.10 +1.0 2,892,828 + ABID97_RS13930 0.14 -0.2 2,892,828 + ABID97_RS13930 0.14 -0.3 2,892,829 - ABID97_RS13930 0.14 -0.1 2,893,056 + ABID97_RS13930 0.24 -0.6 2,893,152 + ABID97_RS13930 0.29 -0.6 2,893,152 + ABID97_RS13930 0.29 -0.5 2,893,152 + ABID97_RS13930 0.29 +0.9 2,893,153 - ABID97_RS13930 0.29 -0.4 2,893,153 - ABID97_RS13930 0.29 -0.8 2,893,153 - ABID97_RS13930 0.29 -0.3 2,893,153 - ABID97_RS13930 0.29 -0.3 2,893,203 + ABID97_RS13930 0.31 -1.0 2,893,321 - ABID97_RS13930 0.36 +0.5
Or see this region's nucleotide sequence