Experiment: L-Leucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS12755 and ABID97_RS12760 overlap by 4 nucleotides ABID97_RS12760 and ABID97_RS12765 are separated by 26 nucleotides ABID97_RS12765 and ABID97_RS12770 are separated by 31 nucleotides ABID97_RS12770 and ABID97_RS12775 are separated by 154 nucleotides
ABID97_RS12755: ABID97_RS12755 - calcium incorporation protein MxaA, at 2,644,706 to 2,645,590
_RS12755
ABID97_RS12760: ABID97_RS12760 - DUF58 domain-containing protein, at 2,645,587 to 2,646,462
_RS12760
ABID97_RS12765: ABID97_RS12765 - MoxR family ATPase, at 2,646,489 to 2,647,508
_RS12765
ABID97_RS12770: ABID97_RS12770 - SRPBCC family protein, at 2,647,540 to 2,647,980
_RS12770
ABID97_RS12775: ABID97_RS12775 - YncE family protein, at 2,648,135 to 2,649,118
_RS12775
Position (kb)
2646
2647
2648 Strain fitness (log2 ratio)
-1
0
1 at 2646.437 kb on + strand at 2646.438 kb on - strand at 2646.560 kb on - strand at 2647.243 kb on + strand, within ABID97_RS12765 at 2647.244 kb on - strand, within ABID97_RS12765 at 2647.244 kb on - strand, within ABID97_RS12765 at 2647.252 kb on + strand, within ABID97_RS12765 at 2647.252 kb on + strand, within ABID97_RS12765 at 2647.542 kb on - strand at 2647.727 kb on + strand, within ABID97_RS12770 at 2647.728 kb on - strand, within ABID97_RS12770 at 2647.766 kb on + strand, within ABID97_RS12770 at 2647.767 kb on - strand, within ABID97_RS12770 at 2647.767 kb on - strand, within ABID97_RS12770 at 2647.772 kb on + strand, within ABID97_RS12770 at 2647.773 kb on - strand, within ABID97_RS12770 at 2648.108 kb on + strand at 2648.109 kb on - strand at 2648.109 kb on - strand at 2648.265 kb on + strand, within ABID97_RS12775 at 2648.265 kb on + strand, within ABID97_RS12775 at 2648.386 kb on - strand, within ABID97_RS12775
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (C) remove 2,646,437 + -0.1 2,646,438 - +0.0 2,646,560 - +0.0 2,647,243 + ABID97_RS12765 0.74 -0.5 2,647,244 - ABID97_RS12765 0.74 +0.3 2,647,244 - ABID97_RS12765 0.74 +1.0 2,647,252 + ABID97_RS12765 0.75 +0.4 2,647,252 + ABID97_RS12765 0.75 +0.5 2,647,542 - +0.4 2,647,727 + ABID97_RS12770 0.42 +0.0 2,647,728 - ABID97_RS12770 0.43 -0.9 2,647,766 + ABID97_RS12770 0.51 -0.2 2,647,767 - ABID97_RS12770 0.51 -0.4 2,647,767 - ABID97_RS12770 0.51 -0.6 2,647,772 + ABID97_RS12770 0.53 -0.8 2,647,773 - ABID97_RS12770 0.53 +0.3 2,648,108 + -1.0 2,648,109 - +0.4 2,648,109 - +0.2 2,648,265 + ABID97_RS12775 0.13 -0.2 2,648,265 + ABID97_RS12775 0.13 -0.7 2,648,386 - ABID97_RS12775 0.26 -0.2
Or see this region's nucleotide sequence