Experiment: L-Leucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS06185 and ABID97_RS06190 are separated by 269 nucleotides ABID97_RS06190 and ABID97_RS06195 are separated by 8 nucleotides ABID97_RS06195 and ABID97_RS06200 are separated by 1 nucleotides
ABID97_RS06185: ABID97_RS06185 - ATP-dependent protease ATPase subunit HslU, at 1,304,817 to 1,306,145
_RS06185
ABID97_RS06190: ABID97_RS06190 - division/cell wall cluster transcriptional repressor MraZ, at 1,306,415 to 1,306,843
_RS06190
ABID97_RS06195: ABID97_RS06195 - 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH, at 1,306,852 to 1,307,775
_RS06195
ABID97_RS06200: ABID97_RS06200 - cell division protein FtsL, at 1,307,777 to 1,308,124
_RS06200
Position (kb)
1306
1307 Strain fitness (log2 ratio)
-2
-1
0
1 at 1305.693 kb on + strand, within ABID97_RS06185 at 1305.694 kb on - strand, within ABID97_RS06185 at 1305.694 kb on - strand, within ABID97_RS06185 at 1305.703 kb on + strand, within ABID97_RS06185 at 1305.704 kb on - strand, within ABID97_RS06185 at 1305.876 kb on + strand, within ABID97_RS06185 at 1305.876 kb on + strand, within ABID97_RS06185 at 1305.876 kb on + strand, within ABID97_RS06185 at 1306.030 kb on + strand at 1306.030 kb on + strand at 1306.031 kb on - strand at 1306.031 kb on - strand at 1306.031 kb on - strand at 1306.071 kb on - strand at 1306.083 kb on + strand at 1306.083 kb on + strand at 1306.083 kb on + strand at 1306.083 kb on + strand at 1306.084 kb on - strand at 1306.084 kb on - strand at 1306.108 kb on + strand at 1306.109 kb on - strand at 1306.629 kb on + strand, within ABID97_RS06190 at 1306.775 kb on + strand, within ABID97_RS06190 at 1306.775 kb on + strand, within ABID97_RS06190 at 1306.775 kb on + strand, within ABID97_RS06190 at 1306.775 kb on + strand, within ABID97_RS06190 at 1307.629 kb on + strand, within ABID97_RS06195
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (C) remove 1,305,693 + ABID97_RS06185 0.66 -1.1 1,305,694 - ABID97_RS06185 0.66 -0.4 1,305,694 - ABID97_RS06185 0.66 -0.7 1,305,703 + ABID97_RS06185 0.67 -0.6 1,305,704 - ABID97_RS06185 0.67 -0.6 1,305,876 + ABID97_RS06185 0.80 -0.7 1,305,876 + ABID97_RS06185 0.80 -1.0 1,305,876 + ABID97_RS06185 0.80 +1.4 1,306,030 + -0.4 1,306,030 + -1.7 1,306,031 - -0.7 1,306,031 - +0.7 1,306,031 - -0.6 1,306,071 - -0.2 1,306,083 + -0.6 1,306,083 + -0.3 1,306,083 + -1.0 1,306,083 + -0.9 1,306,084 - -0.5 1,306,084 - -2.0 1,306,108 + +0.7 1,306,109 - -0.7 1,306,629 + ABID97_RS06190 0.50 -0.9 1,306,775 + ABID97_RS06190 0.84 -1.7 1,306,775 + ABID97_RS06190 0.84 -1.9 1,306,775 + ABID97_RS06190 0.84 -1.7 1,306,775 + ABID97_RS06190 0.84 -1.2 1,307,629 + ABID97_RS06195 0.84 +1.7
Or see this region's nucleotide sequence