Experiment: L-Leucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS00275 and ABID97_RS00280 are separated by 65 nucleotides ABID97_RS00280 and ABID97_RS00285 are separated by 45 nucleotides ABID97_RS00285 and ABID97_RS00290 are separated by 2 nucleotides ABID97_RS00290 and ABID97_RS00295 are separated by 95 nucleotides
ABID97_RS00275: ABID97_RS00275 - SIS domain-containing protein, at 62,256 to 62,900
_RS00275
ABID97_RS00280: ABID97_RS00280 - YraN family protein, at 62,966 to 63,343
_RS00280
ABID97_RS00285: ABID97_RS00285 - 16S rRNA (cytidine(1402)-2'-O)-methyltransferase, at 63,389 to 64,342
_RS00285
ABID97_RS00290: ABID97_RS00290 - glutathione S-transferase, at 64,345 to 65,085
_RS00290
ABID97_RS00295: ABID97_RS00295 - hypothetical protein, at 65,181 to 65,549
_RS00295
Position (kb) 63
64
65 Strain fitness (log2 ratio) -2
-1
0
1
2 at 62.848 kb on + strand at 62.848 kb on + strand at 62.848 kb on + strand at 62.914 kb on - strand at 63.069 kb on + strand, within ABID97_RS00280 at 63.069 kb on + strand, within ABID97_RS00280 at 63.070 kb on - strand, within ABID97_RS00280 at 63.240 kb on + strand, within ABID97_RS00280 at 63.241 kb on - strand, within ABID97_RS00280 at 63.241 kb on - strand, within ABID97_RS00280 at 63.400 kb on - strand at 63.400 kb on - strand at 63.461 kb on + strand at 63.462 kb on - strand at 63.479 kb on + strand at 63.479 kb on + strand at 63.479 kb on + strand at 63.480 kb on - strand at 63.480 kb on - strand at 63.480 kb on - strand at 63.480 kb on - strand at 63.480 kb on - strand at 63.602 kb on + strand, within ABID97_RS00285 at 63.711 kb on - strand, within ABID97_RS00285 at 63.711 kb on - strand, within ABID97_RS00285 at 63.711 kb on - strand, within ABID97_RS00285 at 63.711 kb on - strand, within ABID97_RS00285 at 64.287 kb on - strand at 64.287 kb on - strand at 64.287 kb on - strand at 64.340 kb on + strand at 64.340 kb on + strand at 64.341 kb on - strand at 64.364 kb on + strand at 64.365 kb on - strand at 64.365 kb on - strand at 64.418 kb on + strand at 64.419 kb on - strand, within ABID97_RS00290 at 64.514 kb on + strand, within ABID97_RS00290 at 64.515 kb on - strand, within ABID97_RS00290 at 64.515 kb on - strand, within ABID97_RS00290 at 64.556 kb on + strand, within ABID97_RS00290 at 64.556 kb on + strand, within ABID97_RS00290 at 64.556 kb on + strand, within ABID97_RS00290 at 64.557 kb on - strand, within ABID97_RS00290 at 64.557 kb on - strand, within ABID97_RS00290 at 64.557 kb on - strand, within ABID97_RS00290 at 64.557 kb on - strand, within ABID97_RS00290 at 64.697 kb on + strand, within ABID97_RS00290 at 64.697 kb on + strand, within ABID97_RS00290 at 64.697 kb on + strand, within ABID97_RS00290 at 64.698 kb on - strand, within ABID97_RS00290 at 64.698 kb on - strand, within ABID97_RS00290 at 64.698 kb on - strand, within ABID97_RS00290 at 64.832 kb on + strand, within ABID97_RS00290 at 64.833 kb on - strand, within ABID97_RS00290 at 64.833 kb on - strand, within ABID97_RS00290 at 64.833 kb on - strand, within ABID97_RS00290 at 64.988 kb on + strand, within ABID97_RS00290 at 64.988 kb on + strand, within ABID97_RS00290 at 64.989 kb on - strand, within ABID97_RS00290 at 64.989 kb on - strand, within ABID97_RS00290 at 64.989 kb on - strand, within ABID97_RS00290 at 64.989 kb on - strand, within ABID97_RS00290 at 64.989 kb on - strand, within ABID97_RS00290 at 64.989 kb on - strand, within ABID97_RS00290 at 64.989 kb on - strand, within ABID97_RS00290 at 64.989 kb on - strand, within ABID97_RS00290 at 65.054 kb on + strand at 65.066 kb on + strand at 65.066 kb on + strand at 65.066 kb on + strand at 65.066 kb on + strand at 65.066 kb on + strand at 65.067 kb on - strand at 65.067 kb on - strand at 65.067 kb on - strand at 65.067 kb on - strand at 65.067 kb on - strand at 65.070 kb on + strand at 65.070 kb on + strand at 65.070 kb on + strand at 65.070 kb on + strand at 65.070 kb on + strand at 65.071 kb on - strand at 65.071 kb on - strand at 65.071 kb on - strand at 65.071 kb on - strand at 65.071 kb on - strand at 65.071 kb on - strand at 65.139 kb on + strand at 65.140 kb on - strand at 65.140 kb on - strand at 65.140 kb on - strand at 65.140 kb on - strand at 65.297 kb on - strand, within ABID97_RS00295 at 65.323 kb on + strand, within ABID97_RS00295 at 65.323 kb on + strand, within ABID97_RS00295 at 65.324 kb on - strand, within ABID97_RS00295
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (C) remove 62,848 + +0.1 62,848 + +0.2 62,848 + +0.8 62,914 - -0.1 63,069 + ABID97_RS00280 0.27 +1.1 63,069 + ABID97_RS00280 0.27 -1.1 63,070 - ABID97_RS00280 0.28 -0.9 63,240 + ABID97_RS00280 0.72 -0.5 63,241 - ABID97_RS00280 0.73 -0.0 63,241 - ABID97_RS00280 0.73 -0.5 63,400 - -0.5 63,400 - -0.3 63,461 + +0.7 63,462 - +0.9 63,479 + -0.5 63,479 + +0.7 63,479 + +0.5 63,480 - +0.7 63,480 - +0.6 63,480 - +0.9 63,480 - +0.8 63,480 - +0.7 63,602 + ABID97_RS00285 0.22 +0.6 63,711 - ABID97_RS00285 0.34 +0.0 63,711 - ABID97_RS00285 0.34 +0.8 63,711 - ABID97_RS00285 0.34 +1.0 63,711 - ABID97_RS00285 0.34 +0.8 64,287 - +0.5 64,287 - +1.1 64,287 - +0.9 64,340 + -0.2 64,340 + -0.0 64,341 - -0.9 64,364 + -0.1 64,365 - -0.3 64,365 - -0.0 64,418 + -0.2 64,419 - ABID97_RS00290 0.10 -0.1 64,514 + ABID97_RS00290 0.23 +0.7 64,515 - ABID97_RS00290 0.23 +0.4 64,515 - ABID97_RS00290 0.23 -0.2 64,556 + ABID97_RS00290 0.28 -0.1 64,556 + ABID97_RS00290 0.28 +0.3 64,556 + ABID97_RS00290 0.28 +0.0 64,557 - ABID97_RS00290 0.29 -0.2 64,557 - ABID97_RS00290 0.29 -0.3 64,557 - ABID97_RS00290 0.29 -0.1 64,557 - ABID97_RS00290 0.29 -0.3 64,697 + ABID97_RS00290 0.48 +0.2 64,697 + ABID97_RS00290 0.48 +0.3 64,697 + ABID97_RS00290 0.48 +1.5 64,698 - ABID97_RS00290 0.48 -0.3 64,698 - ABID97_RS00290 0.48 -0.5 64,698 - ABID97_RS00290 0.48 -0.1 64,832 + ABID97_RS00290 0.66 +0.7 64,833 - ABID97_RS00290 0.66 -0.7 64,833 - ABID97_RS00290 0.66 -0.0 64,833 - ABID97_RS00290 0.66 +0.2 64,988 + ABID97_RS00290 0.87 -2.3 64,988 + ABID97_RS00290 0.87 -0.1 64,989 - ABID97_RS00290 0.87 -0.5 64,989 - ABID97_RS00290 0.87 -0.1 64,989 - ABID97_RS00290 0.87 -0.4 64,989 - ABID97_RS00290 0.87 -0.4 64,989 - ABID97_RS00290 0.87 -1.3 64,989 - ABID97_RS00290 0.87 -0.3 64,989 - ABID97_RS00290 0.87 -0.1 64,989 - ABID97_RS00290 0.87 -0.7 65,054 + -0.8 65,066 + -0.1 65,066 + -1.9 65,066 + +0.2 65,066 + -1.7 65,066 + +0.4 65,067 - +0.1 65,067 - +0.7 65,067 - -0.4 65,067 - -0.2 65,067 - -0.1 65,070 + -0.3 65,070 + +2.3 65,070 + -0.1 65,070 + +0.7 65,070 + +2.7 65,071 - -0.4 65,071 - -1.1 65,071 - +1.0 65,071 - +0.8 65,071 - -0.0 65,071 - -0.8 65,139 + -0.5 65,140 - +0.1 65,140 - -0.4 65,140 - -0.8 65,140 - -1.2 65,297 - ABID97_RS00295 0.31 -0.1 65,323 + ABID97_RS00295 0.38 +0.2 65,323 + ABID97_RS00295 0.38 -0.5 65,324 - ABID97_RS00295 0.39 +0.2
Or see this region's nucleotide sequence