Experiment: succinate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt mglC and mglA are separated by 15 nucleotides mglA and mglB are separated by 60 nucleotides
b2148: mglC - beta-methylgalactoside transporter inner membrane component (NCBI), at 2,234,765 to 2,235,775
mglC
b2149: mglA - fused methyl-galactoside transporter subunits of ABC superfamily: ATP-binding components (NCBI), at 2,235,791 to 2,237,311
mglA
b2150: mglB - methyl-galactoside transporter subunit (NCBI), at 2,237,372 to 2,238,370
mglB
Position (kb)
2235
2236
2237
2238 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2234.823 kb on + strand at 2234.843 kb on + strand at 2234.859 kb on + strand at 2234.923 kb on + strand, within mglC at 2234.944 kb on + strand, within mglC at 2234.944 kb on + strand, within mglC at 2234.944 kb on + strand, within mglC at 2234.944 kb on + strand, within mglC at 2234.956 kb on - strand, within mglC at 2234.963 kb on - strand, within mglC at 2234.963 kb on - strand, within mglC at 2234.988 kb on - strand, within mglC at 2235.007 kb on + strand, within mglC at 2235.021 kb on - strand, within mglC at 2235.075 kb on + strand, within mglC at 2235.103 kb on - strand, within mglC at 2235.103 kb on - strand, within mglC at 2235.107 kb on + strand, within mglC at 2235.107 kb on + strand, within mglC at 2235.113 kb on - strand, within mglC at 2235.113 kb on - strand, within mglC at 2235.209 kb on + strand, within mglC at 2235.259 kb on + strand, within mglC at 2235.366 kb on + strand, within mglC at 2235.366 kb on + strand, within mglC at 2235.473 kb on + strand, within mglC at 2235.473 kb on + strand, within mglC at 2235.522 kb on + strand, within mglC at 2235.523 kb on - strand, within mglC at 2235.557 kb on - strand, within mglC at 2235.564 kb on + strand, within mglC at 2235.580 kb on + strand, within mglC at 2235.640 kb on + strand, within mglC at 2235.640 kb on + strand, within mglC at 2235.795 kb on - strand at 2235.805 kb on - strand at 2235.805 kb on - strand at 2235.902 kb on - strand at 2235.934 kb on - strand at 2235.998 kb on - strand, within mglA at 2236.005 kb on - strand, within mglA at 2236.005 kb on - strand, within mglA at 2236.005 kb on - strand, within mglA at 2236.005 kb on - strand, within mglA at 2236.005 kb on - strand, within mglA at 2236.005 kb on - strand, within mglA at 2236.007 kb on - strand, within mglA at 2236.010 kb on - strand, within mglA at 2236.067 kb on - strand, within mglA at 2236.067 kb on - strand, within mglA at 2236.147 kb on + strand, within mglA at 2236.173 kb on + strand, within mglA at 2236.249 kb on - strand, within mglA at 2236.249 kb on - strand, within mglA at 2236.284 kb on - strand, within mglA at 2236.331 kb on + strand, within mglA at 2236.331 kb on + strand, within mglA at 2236.331 kb on - strand, within mglA at 2236.356 kb on - strand, within mglA at 2236.364 kb on - strand, within mglA at 2236.387 kb on - strand, within mglA at 2236.421 kb on - strand, within mglA at 2236.446 kb on + strand, within mglA at 2236.466 kb on - strand, within mglA at 2236.478 kb on - strand, within mglA at 2236.510 kb on - strand, within mglA at 2236.510 kb on - strand, within mglA at 2236.559 kb on + strand, within mglA at 2236.579 kb on - strand, within mglA at 2236.579 kb on - strand, within mglA at 2236.626 kb on - strand, within mglA at 2236.697 kb on + strand, within mglA at 2236.697 kb on + strand, within mglA at 2236.895 kb on + strand, within mglA at 2236.901 kb on - strand, within mglA at 2236.943 kb on - strand, within mglA at 2236.947 kb on + strand, within mglA at 2236.959 kb on + strand, within mglA at 2236.962 kb on - strand, within mglA at 2236.962 kb on - strand, within mglA at 2236.988 kb on + strand, within mglA at 2236.988 kb on - strand, within mglA at 2237.034 kb on + strand, within mglA at 2237.079 kb on - strand, within mglA at 2237.084 kb on + strand, within mglA at 2237.193 kb on + strand at 2237.238 kb on - strand at 2237.249 kb on - strand at 2237.267 kb on - strand at 2237.291 kb on - strand at 2237.296 kb on - strand at 2237.296 kb on - strand at 2237.336 kb on - strand at 2237.356 kb on - strand at 2237.356 kb on - strand at 2237.356 kb on - strand at 2237.356 kb on - strand at 2237.407 kb on - strand at 2237.407 kb on - strand at 2237.422 kb on - strand at 2237.422 kb on - strand at 2237.430 kb on - strand at 2237.530 kb on - strand, within mglB at 2237.897 kb on - strand, within mglB at 2237.901 kb on + strand, within mglB at 2237.927 kb on - strand, within mglB at 2237.989 kb on - strand, within mglB at 2238.223 kb on - strand, within mglB at 2238.269 kb on + strand, within mglB at 2238.309 kb on + strand at 2238.309 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction succinate (C) remove 2,234,823 + -1.6 2,234,843 + -0.4 2,234,859 + -1.5 2,234,923 + mglC b2148 0.16 -1.3 2,234,944 + mglC b2148 0.18 -0.5 2,234,944 + mglC b2148 0.18 +0.1 2,234,944 + mglC b2148 0.18 -0.7 2,234,944 + mglC b2148 0.18 -0.8 2,234,956 - mglC b2148 0.19 -1.2 2,234,963 - mglC b2148 0.20 -3.2 2,234,963 - mglC b2148 0.20 -0.4 2,234,988 - mglC b2148 0.22 -1.6 2,235,007 + mglC b2148 0.24 -0.3 2,235,021 - mglC b2148 0.25 -0.9 2,235,075 + mglC b2148 0.31 -1.3 2,235,103 - mglC b2148 0.33 -0.8 2,235,103 - mglC b2148 0.33 -0.8 2,235,107 + mglC b2148 0.34 -0.3 2,235,107 + mglC b2148 0.34 -0.7 2,235,113 - mglC b2148 0.34 -1.4 2,235,113 - mglC b2148 0.34 -2.4 2,235,209 + mglC b2148 0.44 -1.3 2,235,259 + mglC b2148 0.49 -1.2 2,235,366 + mglC b2148 0.59 +0.7 2,235,366 + mglC b2148 0.59 -0.4 2,235,473 + mglC b2148 0.70 -0.8 2,235,473 + mglC b2148 0.70 -0.6 2,235,522 + mglC b2148 0.75 -0.3 2,235,523 - mglC b2148 0.75 -1.0 2,235,557 - mglC b2148 0.78 -0.6 2,235,564 + mglC b2148 0.79 +0.8 2,235,580 + mglC b2148 0.81 -1.6 2,235,640 + mglC b2148 0.87 +0.4 2,235,640 + mglC b2148 0.87 -1.2 2,235,795 - +1.0 2,235,805 - +0.2 2,235,805 - +1.5 2,235,902 - -0.3 2,235,934 - +0.2 2,235,998 - mglA b2149 0.14 -1.1 2,236,005 - mglA b2149 0.14 +1.6 2,236,005 - mglA b2149 0.14 +0.7 2,236,005 - mglA b2149 0.14 +0.6 2,236,005 - mglA b2149 0.14 +0.6 2,236,005 - mglA b2149 0.14 +0.3 2,236,005 - mglA b2149 0.14 -0.3 2,236,007 - mglA b2149 0.14 +0.3 2,236,010 - mglA b2149 0.14 +0.7 2,236,067 - mglA b2149 0.18 +0.7 2,236,067 - mglA b2149 0.18 -0.3 2,236,147 + mglA b2149 0.23 +0.5 2,236,173 + mglA b2149 0.25 -0.2 2,236,249 - mglA b2149 0.30 +1.2 2,236,249 - mglA b2149 0.30 +0.8 2,236,284 - mglA b2149 0.32 -0.4 2,236,331 + mglA b2149 0.36 -1.8 2,236,331 + mglA b2149 0.36 -1.5 2,236,331 - mglA b2149 0.36 +0.4 2,236,356 - mglA b2149 0.37 -0.1 2,236,364 - mglA b2149 0.38 +1.0 2,236,387 - mglA b2149 0.39 -1.1 2,236,421 - mglA b2149 0.41 +0.3 2,236,446 + mglA b2149 0.43 -1.5 2,236,466 - mglA b2149 0.44 +1.2 2,236,478 - mglA b2149 0.45 +0.8 2,236,510 - mglA b2149 0.47 +0.9 2,236,510 - mglA b2149 0.47 -0.1 2,236,559 + mglA b2149 0.50 +0.2 2,236,579 - mglA b2149 0.52 +0.5 2,236,579 - mglA b2149 0.52 -0.0 2,236,626 - mglA b2149 0.55 +0.8 2,236,697 + mglA b2149 0.60 +1.2 2,236,697 + mglA b2149 0.60 +0.0 2,236,895 + mglA b2149 0.73 -0.1 2,236,901 - mglA b2149 0.73 +0.8 2,236,943 - mglA b2149 0.76 +0.8 2,236,947 + mglA b2149 0.76 +0.2 2,236,959 + mglA b2149 0.77 +1.1 2,236,962 - mglA b2149 0.77 +2.1 2,236,962 - mglA b2149 0.77 +2.8 2,236,988 + mglA b2149 0.79 -0.3 2,236,988 - mglA b2149 0.79 -0.3 2,237,034 + mglA b2149 0.82 +0.1 2,237,079 - mglA b2149 0.85 +1.1 2,237,084 + mglA b2149 0.85 +0.6 2,237,193 + +0.6 2,237,238 - -0.6 2,237,249 - +0.9 2,237,267 - +0.4 2,237,291 - +0.2 2,237,296 - +0.8 2,237,296 - +0.5 2,237,336 - +0.9 2,237,356 - +0.9 2,237,356 - -0.1 2,237,356 - +0.1 2,237,356 - -0.9 2,237,407 - +1.3 2,237,407 - -0.7 2,237,422 - -0.8 2,237,422 - -0.2 2,237,430 - +1.8 2,237,530 - mglB b2150 0.16 -0.2 2,237,897 - mglB b2150 0.53 -1.4 2,237,901 + mglB b2150 0.53 -0.1 2,237,927 - mglB b2150 0.56 -1.6 2,237,989 - mglB b2150 0.62 -1.1 2,238,223 - mglB b2150 0.85 -0.1 2,238,269 + mglB b2150 0.90 +0.7 2,238,309 + +1.1 2,238,309 + +0.5
Or see this region's nucleotide sequence