Experiment: succinate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt nfrB and cusS are separated by 149 nucleotides cusS and cusR overlap by 11 nucleotides cusR and cusC are separated by 156 nucleotides
b0569: nfrB - bacteriophage N4 receptor, inner membrane subunit (NCBI), at 590,164 to 592,401
nfrB
b0570: cusS - sensory histidine kinase in two-component regulatory system with CusR, senses copper ions (NCBI), at 592,551 to 593,993
cusS
b0571: cusR - DNA-binding response regulator in two-component regulatory system with CusS (NCBI), at 593,983 to 594,666
cusR
b0572: cusC - copper/silver efflux system, outer membrane component (NCBI), at 594,823 to 596,196
cusC
Position (kb) 592
593
594 Strain fitness (log2 ratio) -2
-1
0
1 at 591.705 kb on + strand, within nfrB at 591.750 kb on - strand, within nfrB at 591.750 kb on - strand, within nfrB at 591.767 kb on + strand, within nfrB at 591.808 kb on + strand, within nfrB at 591.888 kb on + strand, within nfrB at 592.009 kb on + strand, within nfrB at 592.011 kb on + strand, within nfrB at 592.021 kb on - strand, within nfrB at 592.025 kb on + strand, within nfrB at 592.168 kb on - strand, within nfrB at 592.179 kb on - strand at 592.205 kb on + strand at 592.205 kb on + strand at 592.565 kb on - strand at 592.565 kb on - strand at 592.696 kb on + strand, within cusS at 592.776 kb on + strand, within cusS at 592.776 kb on + strand, within cusS at 592.809 kb on - strand, within cusS at 592.822 kb on + strand, within cusS at 592.828 kb on - strand, within cusS at 592.828 kb on - strand, within cusS at 593.025 kb on - strand, within cusS at 593.031 kb on - strand, within cusS at 593.083 kb on + strand, within cusS at 593.091 kb on + strand, within cusS at 593.091 kb on + strand, within cusS at 593.248 kb on - strand, within cusS at 593.368 kb on + strand, within cusS at 593.496 kb on - strand, within cusS at 593.587 kb on + strand, within cusS at 593.611 kb on - strand, within cusS at 593.646 kb on - strand, within cusS at 593.694 kb on - strand, within cusS at 593.694 kb on - strand, within cusS at 593.704 kb on + strand, within cusS at 593.710 kb on - strand, within cusS at 593.887 kb on + strand at 594.000 kb on + strand at 594.000 kb on + strand at 594.001 kb on + strand at 594.001 kb on - strand at 594.149 kb on - strand, within cusR at 594.149 kb on - strand, within cusR at 594.200 kb on - strand, within cusR at 594.200 kb on - strand, within cusR at 594.209 kb on - strand, within cusR at 594.209 kb on - strand, within cusR at 594.219 kb on - strand, within cusR at 594.219 kb on - strand, within cusR at 594.343 kb on - strand, within cusR at 594.460 kb on - strand, within cusR at 594.460 kb on - strand, within cusR at 594.474 kb on - strand, within cusR at 594.515 kb on - strand, within cusR at 594.557 kb on + strand, within cusR at 594.557 kb on + strand, within cusR at 594.723 kb on - strand at 594.743 kb on - strand at 594.895 kb on - strand at 594.952 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction succinate (C) remove 591,705 + nfrB b0569 0.69 +0.0 591,750 - nfrB b0569 0.71 -1.3 591,750 - nfrB b0569 0.71 -1.1 591,767 + nfrB b0569 0.72 +0.6 591,808 + nfrB b0569 0.73 +0.0 591,888 + nfrB b0569 0.77 +0.3 592,009 + nfrB b0569 0.82 -0.1 592,011 + nfrB b0569 0.83 -0.0 592,021 - nfrB b0569 0.83 +0.4 592,025 + nfrB b0569 0.83 -0.3 592,168 - nfrB b0569 0.90 -0.2 592,179 - +0.3 592,205 + -0.1 592,205 + -0.5 592,565 - +0.9 592,565 - +0.3 592,696 + cusS b0570 0.10 +0.7 592,776 + cusS b0570 0.16 +0.5 592,776 + cusS b0570 0.16 +0.6 592,809 - cusS b0570 0.18 +0.1 592,822 + cusS b0570 0.19 -0.2 592,828 - cusS b0570 0.19 +0.7 592,828 - cusS b0570 0.19 +1.2 593,025 - cusS b0570 0.33 -0.9 593,031 - cusS b0570 0.33 +1.0 593,083 + cusS b0570 0.37 +0.8 593,091 + cusS b0570 0.37 +0.8 593,091 + cusS b0570 0.37 +0.6 593,248 - cusS b0570 0.48 +0.9 593,368 + cusS b0570 0.57 +0.6 593,496 - cusS b0570 0.65 +0.8 593,587 + cusS b0570 0.72 -0.5 593,611 - cusS b0570 0.73 +0.2 593,646 - cusS b0570 0.76 +0.8 593,694 - cusS b0570 0.79 +1.5 593,694 - cusS b0570 0.79 -1.0 593,704 + cusS b0570 0.80 +0.1 593,710 - cusS b0570 0.80 -1.6 593,887 + -0.4 594,000 + +0.2 594,000 + -0.5 594,001 + -0.2 594,001 - +0.5 594,149 - cusR b0571 0.24 +1.0 594,149 - cusR b0571 0.24 +0.5 594,200 - cusR b0571 0.32 -1.6 594,200 - cusR b0571 0.32 -0.3 594,209 - cusR b0571 0.33 -0.1 594,209 - cusR b0571 0.33 +0.2 594,219 - cusR b0571 0.35 -1.3 594,219 - cusR b0571 0.35 -0.7 594,343 - cusR b0571 0.53 -0.2 594,460 - cusR b0571 0.70 -2.0 594,460 - cusR b0571 0.70 -0.4 594,474 - cusR b0571 0.72 -1.1 594,515 - cusR b0571 0.78 +0.4 594,557 + cusR b0571 0.84 +0.2 594,557 + cusR b0571 0.84 +0.0 594,723 - +0.1 594,743 - -1.9 594,895 - +0.3 594,952 - +1.0
Or see this region's nucleotide sequence