Experiment: KB with Phloretin 125 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4141 and Psyr_4142 are separated by 304 nucleotides Psyr_4142 and Psyr_4143 are separated by 29 nucleotides Psyr_4143 and Psyr_4144 are separated by 8 nucleotides
Psyr_4141: Psyr_4141 - ABC transporter, at 4,929,925 to 4,930,734
_4141
Psyr_4142: Psyr_4142 - KpsF/GutQ, at 4,931,039 to 4,932,013
_4142
Psyr_4143: Psyr_4143 - HAD-superfamily hydrolase, subfamily IIIA:Phosphatase YrbI, at 4,932,043 to 4,932,552
_4143
Psyr_4144: Psyr_4144 - Protein of unknown function DUF1239, at 4,932,561 to 4,933,133
_4144
Position (kb) 4931
4932
4933 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 4930.088 kb on + strand, within Psyr_4141 at 4930.088 kb on + strand, within Psyr_4141 at 4930.089 kb on - strand, within Psyr_4141 at 4930.089 kb on - strand, within Psyr_4141 at 4930.089 kb on - strand, within Psyr_4141 at 4930.089 kb on - strand, within Psyr_4141 at 4930.232 kb on + strand, within Psyr_4141 at 4930.232 kb on + strand, within Psyr_4141 at 4930.232 kb on + strand, within Psyr_4141 at 4930.233 kb on - strand, within Psyr_4141 at 4930.233 kb on - strand, within Psyr_4141 at 4930.233 kb on - strand, within Psyr_4141 at 4930.233 kb on - strand, within Psyr_4141 at 4930.233 kb on - strand, within Psyr_4141 at 4930.233 kb on - strand, within Psyr_4141 at 4930.444 kb on - strand, within Psyr_4141 at 4930.510 kb on + strand, within Psyr_4141 at 4930.715 kb on + strand at 4930.736 kb on + strand at 4930.736 kb on + strand at 4930.737 kb on - strand at 4930.737 kb on - strand at 4930.823 kb on + strand at 4930.823 kb on + strand at 4930.823 kb on + strand at 4930.823 kb on + strand at 4930.823 kb on + strand at 4930.823 kb on + strand at 4930.823 kb on + strand at 4930.823 kb on + strand at 4930.824 kb on - strand at 4930.824 kb on - strand at 4930.824 kb on - strand at 4930.824 kb on - strand at 4930.824 kb on - strand at 4930.824 kb on - strand at 4930.824 kb on - strand at 4930.825 kb on + strand at 4930.825 kb on + strand at 4930.826 kb on - strand at 4930.826 kb on - strand at 4930.920 kb on + strand at 4930.934 kb on + strand at 4930.934 kb on + strand at 4930.935 kb on - strand at 4930.938 kb on + strand at 4930.939 kb on - strand at 4930.939 kb on - strand at 4932.011 kb on + strand at 4932.011 kb on + strand at 4932.011 kb on + strand at 4932.026 kb on + strand at 4932.112 kb on + strand, within Psyr_4143 at 4932.431 kb on + strand, within Psyr_4143 at 4932.431 kb on + strand, within Psyr_4143 at 4932.544 kb on + strand at 4932.548 kb on + strand at 4932.548 kb on + strand at 4932.548 kb on + strand at 4932.548 kb on + strand at 4932.548 kb on + strand at 4932.548 kb on + strand at 4932.550 kb on + strand at 4932.550 kb on + strand at 4932.550 kb on + strand at 4932.550 kb on + strand at 4932.550 kb on + strand at 4932.560 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Phloretin 125 ug/ml remove 4,930,088 + Psyr_4141 0.20 +0.9 4,930,088 + Psyr_4141 0.20 -0.6 4,930,089 - Psyr_4141 0.20 -1.7 4,930,089 - Psyr_4141 0.20 +1.9 4,930,089 - Psyr_4141 0.20 +0.9 4,930,089 - Psyr_4141 0.20 -0.7 4,930,232 + Psyr_4141 0.38 -1.1 4,930,232 + Psyr_4141 0.38 -2.7 4,930,232 + Psyr_4141 0.38 -1.8 4,930,233 - Psyr_4141 0.38 -0.7 4,930,233 - Psyr_4141 0.38 -0.1 4,930,233 - Psyr_4141 0.38 -2.6 4,930,233 - Psyr_4141 0.38 +0.3 4,930,233 - Psyr_4141 0.38 -1.7 4,930,233 - Psyr_4141 0.38 +0.9 4,930,444 - Psyr_4141 0.64 -0.7 4,930,510 + Psyr_4141 0.72 -3.1 4,930,715 + -1.4 4,930,736 + -2.6 4,930,736 + -2.1 4,930,737 - +0.2 4,930,737 - -1.6 4,930,823 + -0.6 4,930,823 + -1.5 4,930,823 + -0.7 4,930,823 + -0.1 4,930,823 + -0.5 4,930,823 + -2.3 4,930,823 + -0.0 4,930,823 + -0.1 4,930,824 - +1.5 4,930,824 - -0.5 4,930,824 - +0.3 4,930,824 - +0.4 4,930,824 - +0.7 4,930,824 - -0.3 4,930,824 - +0.1 4,930,825 + -0.7 4,930,825 + -1.8 4,930,826 - -0.3 4,930,826 - -0.9 4,930,920 + -0.9 4,930,934 + -2.1 4,930,934 + -1.3 4,930,935 - +2.3 4,930,938 + +0.6 4,930,939 - -1.3 4,930,939 - +1.1 4,932,011 + -0.6 4,932,011 + +0.6 4,932,011 + -1.5 4,932,026 + -0.3 4,932,112 + Psyr_4143 0.14 +1.9 4,932,431 + Psyr_4143 0.76 -0.1 4,932,431 + Psyr_4143 0.76 -1.3 4,932,544 + +1.1 4,932,548 + +0.4 4,932,548 + +0.2 4,932,548 + +0.9 4,932,548 + -2.3 4,932,548 + +0.7 4,932,548 + +0.1 4,932,550 + -0.2 4,932,550 + -1.1 4,932,550 + +0.3 4,932,550 + +0.5 4,932,550 + +0.1 4,932,560 + +0.4
Or see this region's nucleotide sequence