Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_3123

Experiment: KB with Phloretin 125 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Phloretin 125 ug/ml
3,743,330	+		Psyr_3122	0.49	+0.8
3,743,331	-		Psyr_3122	0.50	-0.8
3,743,427	+		Psyr_3122	0.60	+0.0
3,743,427	+		Psyr_3122	0.60	+0.6
3,743,427	+		Psyr_3122	0.60	+0.1
3,743,428	-		Psyr_3122	0.60	-0.1
3,743,428	-		Psyr_3122	0.60	+0.0
3,743,428	-		Psyr_3122	0.60	+1.3
3,743,428	-		Psyr_3122	0.60	+0.2
3,743,428	-		Psyr_3122	0.60	+0.3
3,743,428	-		Psyr_3122	0.60	-0.5
3,743,428	-		Psyr_3122	0.60	-1.7
3,743,428	-		Psyr_3122	0.60	-0.2
3,743,428	-		Psyr_3122	0.60	+1.6
3,743,474	-		Psyr_3122	0.64	+0.2
3,743,547	+		Psyr_3122	0.72	-0.5
3,743,548	-		Psyr_3122	0.72	-0.6
3,743,548	-		Psyr_3122	0.72	+0.6
3,743,836	+				+0.9
3,743,841	+				+0.2
3,743,842	-				+0.5
3,743,842	-				+0.3
3,743,842	-				-0.6
3,743,885	-				-0.6
3,744,011	-				+1.0
3,744,011	-				+0.6
3,744,013	-				-1.5
3,744,049	+				+0.6
3,744,049	+				-0.7
3,744,049	+				-0.1
3,744,049	+				-0.8
3,744,049	+				-1.1
3,744,050	-				+0.6
3,744,050	-				+0.1
3,744,050	-				-0.2
3,744,050	-				-0.4
3,744,050	-				+0.0
3,744,076	+				-1.9
3,744,077	-				-1.1
3,744,118	-				-0.4
3,744,134	+				-0.6
3,744,134	+				+0.2
3,744,134	+				-1.5
3,744,135	-				-0.7
3,744,135	-				+0.5
3,744,135	-				+1.5
3,744,135	-				+1.9
3,744,137	-				-2.3
3,744,137	-				-0.2
3,744,137	-				+0.7
3,744,222	-				+0.8
3,744,373	+		Psyr_3123	0.12	-0.3
3,744,373	+		Psyr_3123	0.12	-0.9
3,744,373	+		Psyr_3123	0.12	+1.2
3,744,373	+		Psyr_3123	0.12	-1.0
3,744,373	+		Psyr_3123	0.12	-2.1
3,744,373	+		Psyr_3123	0.12	-0.0
3,744,373	+		Psyr_3123	0.12	-0.6
3,744,373	+		Psyr_3123	0.12	-0.8
3,744,374	-		Psyr_3123	0.12	-0.4
3,744,374	-		Psyr_3123	0.12	+0.2
3,744,374	-		Psyr_3123	0.12	+0.1
3,744,374	-		Psyr_3123	0.12	+0.6
3,744,424	+		Psyr_3123	0.17	-0.2
3,744,424	+		Psyr_3123	0.17	-1.2
3,744,424	+		Psyr_3123	0.17	+0.3
3,744,424	+		Psyr_3123	0.17	+0.3
3,744,425	-		Psyr_3123	0.17	-0.4
3,744,425	-		Psyr_3123	0.17	+0.2
3,744,425	-		Psyr_3123	0.17	+0.2
3,744,425	-		Psyr_3123	0.17	+0.2
3,744,425	-		Psyr_3123	0.17	-0.8
3,744,425	-		Psyr_3123	0.17	+0.5
3,744,425	-		Psyr_3123	0.17	+0.4
3,744,425	-		Psyr_3123	0.17	+0.4
3,744,426	+		Psyr_3123	0.17	+0.4
3,744,426	+		Psyr_3123	0.17	-0.3
3,744,426	+		Psyr_3123	0.17	+0.6
3,744,741	-		Psyr_3123	0.44	+0.4
3,744,741	-		Psyr_3123	0.44	-0.4
3,744,834	+		Psyr_3123	0.52	-0.6
3,744,835	-		Psyr_3123	0.52	-0.9
3,744,879	+		Psyr_3123	0.56	-0.4
3,744,943	-		Psyr_3123	0.62	-1.4
3,744,943	-		Psyr_3123	0.62	-2.0
3,744,975	+		Psyr_3123	0.65	-2.8
3,744,975	+		Psyr_3123	0.65	+0.6
3,744,975	+		Psyr_3123	0.65	-0.3
3,744,975	+		Psyr_3123	0.65	+1.6
3,744,976	-		Psyr_3123	0.65	-1.9
3,744,976	-		Psyr_3123	0.65	-0.5
3,744,976	-		Psyr_3123	0.65	+0.6
3,744,978	+		Psyr_3123	0.65	-0.4
3,745,055	+		Psyr_3123	0.72	-0.2
3,745,055	+		Psyr_3123	0.72	+1.3
3,745,056	-		Psyr_3123	0.72	-0.1
3,745,108	+		Psyr_3123	0.76	+0.1
3,745,108	+		Psyr_3123	0.76	-1.2
3,745,108	+		Psyr_3123	0.76	-1.9
3,745,224	+		Psyr_3123	0.87	+0.1
3,745,269	+				+0.3
3,745,269	+				+0.6
3,745,269	+				-0.9
3,745,269	+				+0.5
3,745,269	+				-0.3
3,745,269	+				+0.8
3,745,270	-				-2.2
3,745,270	-				+0.5
3,745,270	-				+0.1
3,745,270	-				-0.1
3,745,373	-				+0.4
3,745,496	+				-0.4
3,745,496	+				-0.8
3,745,496	+				-1.4
3,745,496	+				+2.2
3,745,496	+				+1.2
3,745,496	+				-0.3
3,745,496	+				+0.6
3,745,496	+				+0.9
3,745,497	-				+0.4
3,745,497	-				-0.9
3,745,497	-				-0.9
3,745,497	-				-0.0
3,745,497	-				-0.3
3,745,497	-				+1.2
3,745,497	-				-0.5
3,745,498	+				+0.1
3,745,498	+				-0.4
3,745,498	+				-0.8
3,745,499	-				+0.0
3,745,499	-				+0.0
3,745,544	-				-0.5
3,745,544	-				+0.6
3,745,544	-				-1.1
3,745,544	-				+0.5
3,745,544	-				+0.3
3,745,570	+				+0.3
3,745,570	+				-0.2
3,745,570	+				+0.3
3,745,571	-				+0.2
3,745,630	+				+1.2
3,745,630	+				-0.2
3,745,630	+				-0.3
3,745,630	+				+0.6
3,745,631	-				-0.6
3,745,631	-				-0.4
3,745,631	-				+0.8
3,745,631	-				+1.2
3,745,631	-				-0.2
3,745,631	-				-0.4
3,745,631	-				+0.6
3,745,633	+				-1.4
3,745,655	+				-0.7
3,745,655	+				+0.7
3,745,655	+				-0.3
3,745,655	+				-0.1
3,745,655	+				-0.7
3,745,655	+				-0.5
3,745,655	+				+0.4
3,745,655	+				+0.6
3,745,656	-				-0.1
3,745,656	-				+0.6
3,745,656	-				-0.9
3,745,656	-				-2.2
3,745,656	-				-1.2
3,745,656	-				-0.7
3,745,656	-				-0.9
3,745,657	+				-1.7
3,745,657	+				-0.8
3,745,657	+				+0.6
3,745,658	-				+0.6
3,745,658	-				-0.5
3,745,658	-				-1.1
3,745,658	-				-0.7
3,745,711	+		Psyr_3124	0.10	-1.4
3,745,859	-		Psyr_3124	0.17	+1.4
3,745,864	+		Psyr_3124	0.18	-2.5
3,745,864	+		Psyr_3124	0.18	+0.3
3,745,865	-		Psyr_3124	0.18	-0.8
3,745,988	+		Psyr_3124	0.23	-0.7
3,745,988	+		Psyr_3124	0.23	-0.4
3,746,005	+		Psyr_3124	0.24	-0.7
3,746,006	-		Psyr_3124	0.24	+0.4
3,746,006	-		Psyr_3124	0.24	-0.7
3,746,066	-		Psyr_3124	0.27	-0.9
3,746,066	-		Psyr_3124	0.27	+0.2
3,746,066	-		Psyr_3124	0.27	+1.6
3,746,176	+		Psyr_3124	0.32	-0.6
3,746,251	+		Psyr_3124	0.36	-1.5
3,746,251	+		Psyr_3124	0.36	-0.7
3,746,251	+		Psyr_3124	0.36	+0.5
3,746,252	-		Psyr_3124	0.36	+0.1
3,746,252	-		Psyr_3124	0.36	-0.1
3,746,325	+		Psyr_3124	0.39	+0.6