Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_2666

Experiment: KB with Phloretin 125 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Phloretin 125 ug/ml
3,235,270	-				+0.8
3,235,274	-				-1.6
3,235,274	-				-1.4
3,235,295	+				-2.0
3,235,296	-				-1.0
3,235,296	-				-1.7
3,235,368	+				+1.0
3,235,368	+				+1.2
3,235,369	-				-1.0
3,235,369	-				-0.1
3,235,544	+				+2.0
3,235,544	+				-1.1
3,235,544	+				+0.4
3,235,544	+				+0.3
3,235,544	+				-1.1
3,235,545	-				+0.4
3,235,545	-				-1.6
3,235,545	-				-1.6
3,235,545	-				+0.7
3,235,549	-				-0.1
3,235,568	-				+0.7
3,235,578	-				-1.4
3,235,578	-				-1.7
3,235,589	-				-1.3
3,235,597	+		Psyr_2665	0.11	+0.2
3,235,598	-		Psyr_2665	0.11	+0.5
3,235,598	-		Psyr_2665	0.11	-0.4
3,235,623	+		Psyr_2665	0.16	-0.3
3,235,623	+		Psyr_2665	0.16	-1.5
3,235,623	+		Psyr_2665	0.16	-1.6
3,235,623	+		Psyr_2665	0.16	-1.3
3,235,624	-		Psyr_2665	0.16	-0.3
3,235,624	-		Psyr_2665	0.16	-1.0
3,235,666	-		Psyr_2665	0.25	-0.9
3,235,736	-		Psyr_2665	0.38	-0.7
3,235,753	+		Psyr_2665	0.42	-0.8
3,235,771	-		Psyr_2665	0.45	-0.7
3,235,771	-		Psyr_2665	0.45	-1.9
3,235,797	+		Psyr_2665	0.50	-0.6
3,235,823	-		Psyr_2665	0.56	-0.4
3,235,899	+		Psyr_2665	0.71	-1.3
3,235,900	-		Psyr_2665	0.71	-0.3
3,235,900	-		Psyr_2665	0.71	-1.3
3,235,926	-		Psyr_2665	0.76	+0.5
3,235,926	-		Psyr_2665	0.76	-0.2
3,235,927	+		Psyr_2665	0.76	-1.6
3,235,928	-		Psyr_2665	0.76	-0.3
3,236,014	-				-1.1
3,236,267	+				-1.3
3,236,268	-				-0.3
3,236,283	+		Psyr_2666	0.11	-2.2
3,236,284	-		Psyr_2666	0.11	+0.4
3,236,318	+		Psyr_2666	0.17	-0.6
3,236,319	-		Psyr_2666	0.18	+0.7
3,236,349	+		Psyr_2666	0.23	-1.9
3,236,412	+		Psyr_2666	0.35	+1.2
3,236,412	+		Psyr_2666	0.35	+0.2
3,236,438	-		Psyr_2666	0.40	+0.3
3,236,467	+		Psyr_2666	0.46	-0.8
3,236,468	-		Psyr_2666	0.46	-1.3
3,236,503	+		Psyr_2666	0.52	-0.2
3,236,504	-		Psyr_2666	0.53	+0.5
3,236,504	-		Psyr_2666	0.53	+0.3
3,236,504	-		Psyr_2666	0.53	+0.8
3,236,509	+		Psyr_2666	0.54	-0.5
3,236,644	-		Psyr_2666	0.79	-1.1
3,236,698	-		Psyr_2666	0.89	+0.3
3,236,795	+				-0.9
3,236,914	-				+0.1
3,236,914	-				-0.0
3,236,918	+				-0.9
3,237,104	+				+1.0
3,237,635	+		Psyr_2667	0.25	+0.0
3,237,635	+		Psyr_2667	0.25	+1.3
3,237,635	+		Psyr_2667	0.25	-0.6
3,237,635	+		Psyr_2667	0.25	-0.1
3,237,635	+		Psyr_2667	0.25	+0.5
3,237,635	+		Psyr_2667	0.25	-0.3
3,237,635	+		Psyr_2667	0.25	+0.7
3,237,636	-		Psyr_2667	0.25	-0.4
3,237,636	-		Psyr_2667	0.25	-0.3
3,237,636	-		Psyr_2667	0.25	+0.5
3,237,707	+		Psyr_2667	0.27	-1.6
3,237,707	+		Psyr_2667	0.27	-0.0
3,237,708	-		Psyr_2667	0.27	+0.7
3,237,735	-		Psyr_2667	0.28	-0.3