Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_2402

Experiment: KB with Phloretin 125 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Phloretin 125 ug/ml
2,783,650	+		Psyr_2401	0.53	+0.2
2,784,197	-				-0.1
2,784,197	-				-0.2
2,784,222	+				-0.0
2,784,222	+				-0.9
2,784,239	+				-0.9
2,784,483	+				-1.3
2,784,484	-				+1.3
2,784,565	-		Psyr_2402	0.13	-1.5
2,784,565	-		Psyr_2402	0.13	+0.5
2,784,589	-		Psyr_2402	0.15	+0.6
2,784,665	+		Psyr_2402	0.22	+0.1
2,784,735	+		Psyr_2402	0.28	+0.2
2,784,858	+		Psyr_2402	0.39	+1.6
2,784,976	+		Psyr_2402	0.50	+0.0
2,785,105	+		Psyr_2402	0.61	+1.1
2,785,156	+		Psyr_2402	0.66	+0.4
2,785,157	-		Psyr_2402	0.66	-0.0
2,785,434	-				+1.3
2,785,534	+				+1.0
2,785,534	+				+0.0
2,785,553	-				-1.0
2,785,553	-				+0.9
2,785,677	+		Psyr_2403	0.16	+0.1
2,785,678	-		Psyr_2403	0.17	-0.1
2,785,687	-		Psyr_2403	0.20	+0.5
2,785,687	-		Psyr_2403	0.20	+0.7
2,785,687	-		Psyr_2403	0.20	-0.1
2,785,995	+				-0.4
2,785,995	+				-0.9
2,785,995	+				-0.3
2,785,995	+				+0.1
2,785,995	+				-0.0
2,785,995	+				+0.1
2,785,996	-				-0.2
2,785,996	-				+1.6
2,785,996	-				-0.9
2,785,996	-				-0.2
2,785,999	+				-0.5
2,785,999	+				-0.5
2,786,031	+		Psyr_2404	0.14	+0.7
2,786,032	-		Psyr_2404	0.14	+0.7
2,786,032	-		Psyr_2404	0.14	-1.3
2,786,064	+		Psyr_2404	0.20	-1.1
2,786,064	+		Psyr_2404	0.20	+0.1
2,786,064	+		Psyr_2404	0.20	+0.4
2,786,064	+		Psyr_2404	0.20	+0.0
2,786,064	+		Psyr_2404	0.20	-0.5
2,786,064	+		Psyr_2404	0.20	-0.3
2,786,064	+		Psyr_2404	0.20	+0.5
2,786,064	+		Psyr_2404	0.20	+2.6
2,786,064	+		Psyr_2404	0.20	+0.6
2,786,064	+		Psyr_2404	0.20	+0.7
2,786,064	+		Psyr_2404	0.20	+2.1
2,786,065	-		Psyr_2404	0.20	-0.5
2,786,065	-		Psyr_2404	0.20	-1.3
2,786,065	-		Psyr_2404	0.20	+0.9
2,786,065	-		Psyr_2404	0.20	-0.3
2,786,065	-		Psyr_2404	0.20	-1.5
2,786,065	-		Psyr_2404	0.20	-0.6
2,786,065	-		Psyr_2404	0.20	+0.7
2,786,107	-		Psyr_2404	0.27	-0.9
2,786,169	+		Psyr_2404	0.38	+0.7
2,786,169	+		Psyr_2404	0.38	-0.4
2,786,170	-		Psyr_2404	0.39	-0.2
2,786,170	-		Psyr_2404	0.39	+2.1
2,786,170	-		Psyr_2404	0.39	-1.6
2,786,352	+		Psyr_2404	0.71	-1.0
2,786,352	+		Psyr_2404	0.71	+0.7
2,786,404	-		Psyr_2404	0.80	+1.3
2,786,404	-		Psyr_2404	0.80	-0.0
2,786,412	+		Psyr_2404	0.82	-0.2
2,786,526	+				-0.7
2,786,527	-				+1.1