Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_2389

Experiment: KB with Phloretin 125 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Phloretin 125 ug/ml
2,769,023	+				-1.5
2,769,024	-				-0.3
2,769,024	-				+1.0
2,769,024	-				-0.5
2,769,032	+				+0.5
2,769,033	-				-0.1
2,769,034	+				+0.7
2,769,034	+				+0.3
2,769,098	-				-0.3
2,769,098	-				-0.3
2,769,125	-				+1.0
2,769,166	-				+1.1
2,769,192	+				+0.7
2,769,379	-		Psyr_2388	0.17	-1.3
2,769,757	+		Psyr_2388	0.72	+1.0
2,769,868	-		Psyr_2388	0.89	+0.8
2,769,886	+				+1.4
2,769,886	+				-1.2
2,769,887	-				-0.0
2,770,023	+				+0.1
2,770,024	-				+1.1
2,770,024	-				+0.3
2,770,024	-				-0.6
2,770,294	+		Psyr_2389	0.35	+0.8
2,770,295	-		Psyr_2389	0.36	+1.1
2,770,319	+		Psyr_2389	0.38	+0.4
2,770,320	-		Psyr_2389	0.38	+0.1
2,770,331	+		Psyr_2389	0.39	-0.9
2,770,332	-		Psyr_2389	0.39	+2.1
2,770,541	+		Psyr_2389	0.61	-0.3
2,770,542	-		Psyr_2389	0.61	+0.1
2,770,854	+				-0.8
2,771,050	-				-1.8
2,771,059	-				+0.7
2,771,059	-				-0.5
2,771,252	+		Psyr_2390	0.14	-0.9
2,771,252	+		Psyr_2390	0.14	-0.5
2,771,252	+		Psyr_2390	0.14	+0.7
2,771,253	-		Psyr_2390	0.14	+0.4
2,771,253	-		Psyr_2390	0.14	-1.3
2,771,253	-		Psyr_2390	0.14	-0.6
2,771,256	+		Psyr_2390	0.14	+0.0
2,771,256	+		Psyr_2390	0.14	-0.9
2,771,256	+		Psyr_2390	0.14	+0.3
2,771,256	+		Psyr_2390	0.14	+0.2
2,771,257	-		Psyr_2390	0.14	-2.1
2,771,257	-		Psyr_2390	0.14	-0.3
2,771,257	-		Psyr_2390	0.14	-0.2
2,771,257	-		Psyr_2390	0.14	-0.9
2,771,257	-		Psyr_2390	0.14	-0.6
2,771,259	+		Psyr_2390	0.14	+1.7
2,771,475	+		Psyr_2390	0.24	+0.7
2,771,475	+		Psyr_2390	0.24	+0.7
2,771,476	-		Psyr_2390	0.24	+0.9
2,771,494	+		Psyr_2390	0.25	-0.1
2,771,494	+		Psyr_2390	0.25	+0.2
2,771,557	-		Psyr_2390	0.28	+0.2
2,771,920	-		Psyr_2390	0.44	-0.0
2,771,920	-		Psyr_2390	0.44	+1.4