Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_1899

Experiment: KB with Phloretin 125 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Phloretin 125 ug/ml
2,172,726	+		Psyr_1898	0.40	-1.2
2,172,726	+		Psyr_1898	0.40	+0.5
2,172,726	+		Psyr_1898	0.40	-0.5
2,172,726	+		Psyr_1898	0.40	+0.1
2,172,726	+		Psyr_1898	0.40	+0.8
2,172,726	+		Psyr_1898	0.40	-0.9
2,172,727	-		Psyr_1898	0.40	-0.7
2,172,727	-		Psyr_1898	0.40	+0.5
2,172,727	-		Psyr_1898	0.40	-0.6
2,172,727	-		Psyr_1898	0.40	-2.0
2,172,727	-		Psyr_1898	0.40	-0.5
2,172,807	+		Psyr_1898	0.46	+0.3
2,172,814	+		Psyr_1898	0.46	+0.1
2,172,831	-		Psyr_1898	0.48	+0.1
2,172,859	+		Psyr_1898	0.50	-1.1
2,172,918	-		Psyr_1898	0.55	+0.1
2,172,918	-		Psyr_1898	0.55	-0.1
2,172,918	-		Psyr_1898	0.55	+1.3
2,172,918	-		Psyr_1898	0.55	-0.1
2,172,918	-		Psyr_1898	0.55	-1.0
2,172,941	+		Psyr_1898	0.57	-0.1
2,172,941	+		Psyr_1898	0.57	+0.8
2,172,941	+		Psyr_1898	0.57	-0.0
2,172,941	+		Psyr_1898	0.57	-0.2
2,172,941	+		Psyr_1898	0.57	+1.3
2,172,941	+		Psyr_1898	0.57	+0.9
2,172,941	+		Psyr_1898	0.57	-0.2
2,172,941	+		Psyr_1898	0.57	-0.3
2,172,941	+		Psyr_1898	0.57	+1.6
2,172,941	+		Psyr_1898	0.57	+0.9
2,172,941	+		Psyr_1898	0.57	-0.7
2,172,941	+		Psyr_1898	0.57	-0.2
2,172,941	+		Psyr_1898	0.57	-0.2
2,172,941	+		Psyr_1898	0.57	-0.6
2,172,941	+		Psyr_1898	0.57	+0.8
2,172,941	+		Psyr_1898	0.57	+0.6
2,172,941	+		Psyr_1898	0.57	+1.8
2,172,942	-		Psyr_1898	0.57	-1.0
2,172,942	-		Psyr_1898	0.57	+0.2
2,172,942	-		Psyr_1898	0.57	+0.1
2,172,942	-		Psyr_1898	0.57	-1.8
2,172,942	-		Psyr_1898	0.57	+0.8
2,172,942	-		Psyr_1898	0.57	+0.1
2,172,942	-		Psyr_1898	0.57	+1.2
2,172,942	-		Psyr_1898	0.57	-1.8
2,172,942	-		Psyr_1898	0.57	-0.2
2,173,082	+		Psyr_1898	0.68	-0.2
2,173,083	-		Psyr_1898	0.68	-0.3
2,173,238	+		Psyr_1898	0.80	+2.2
2,173,239	-		Psyr_1898	0.80	-0.2
2,173,239	-		Psyr_1898	0.80	-0.6
2,173,239	-		Psyr_1898	0.80	+1.1
2,173,239	-		Psyr_1898	0.80	+0.3
2,173,350	+		Psyr_1898	0.89	-0.6
2,173,350	+		Psyr_1898	0.89	+0.2
2,173,351	-		Psyr_1898	0.89	-0.4
2,173,351	-		Psyr_1898	0.89	-0.2
2,173,354	+		Psyr_1898	0.89	-0.2
2,173,354	+		Psyr_1898	0.89	+0.5
2,173,355	-		Psyr_1898	0.89	-0.1
2,173,355	-		Psyr_1898	0.89	-0.5
2,173,355	-		Psyr_1898	0.89	+0.3
2,173,355	-		Psyr_1898	0.89	+0.1
2,173,400	+				+0.8
2,173,401	-				-0.8
2,173,426	+				+1.0
2,173,426	+				+0.5
2,173,658	+				-0.5
2,173,683	+				-0.8
2,173,683	+				+0.1
2,173,684	-		Psyr_1899	0.10	-0.0
2,173,684	-		Psyr_1899	0.10	-0.2
2,173,696	+		Psyr_1899	0.11	-1.0
2,173,696	+		Psyr_1899	0.11	-0.9
2,173,697	-		Psyr_1899	0.11	+0.9
2,173,697	-		Psyr_1899	0.11	+0.8
2,173,697	-		Psyr_1899	0.11	+0.9
2,173,697	-		Psyr_1899	0.11	+1.0
2,173,700	+		Psyr_1899	0.11	-0.4
2,173,700	+		Psyr_1899	0.11	+0.1
2,173,700	+		Psyr_1899	0.11	+0.1
2,173,701	-		Psyr_1899	0.11	+1.1
2,173,701	-		Psyr_1899	0.11	-0.5
2,173,822	+		Psyr_1899	0.21	-0.1
2,173,822	+		Psyr_1899	0.21	+0.3
2,173,823	-		Psyr_1899	0.21	+1.5
2,173,831	+		Psyr_1899	0.21	+0.8
2,173,831	+		Psyr_1899	0.21	+0.8
2,174,086	+		Psyr_1899	0.41	+0.9
2,174,087	-		Psyr_1899	0.41	+0.2
2,174,087	-		Psyr_1899	0.41	-0.6
2,174,087	-		Psyr_1899	0.41	+0.3
2,174,443	+		Psyr_1899	0.69	-1.3
2,174,443	+		Psyr_1899	0.69	+0.5
2,174,444	-		Psyr_1899	0.69	+0.6
2,174,539	+		Psyr_1899	0.76	-1.0
2,174,594	+		Psyr_1899	0.80	-0.6
2,174,629	+		Psyr_1899	0.83	+1.4
2,174,630	-		Psyr_1899	0.83	+1.8
2,174,630	-		Psyr_1899	0.83	+0.5
2,174,630	-		Psyr_1899	0.83	+0.5
2,174,756	-				+1.2
2,174,756	-				+0.7
2,174,829	-				+1.2
2,174,829	-				-0.3
2,174,829	-				-1.5
2,174,848	+				+0.6
2,174,848	+				-0.1
2,174,848	+				-1.4
2,174,848	+				+0.8
2,174,849	-				-1.2
2,174,849	-				-1.5
2,174,849	-				-1.4
2,174,849	-				+0.3
2,174,943	+				+0.8
2,174,944	-				+0.8
2,174,950	-				+0.8
2,174,956	-				-0.2
2,174,999	-				-1.0
2,174,999	-				-0.7
2,175,089	+				+0.4
2,175,110	+				+1.4
2,175,110	+				+0.6
2,175,110	+				-0.1
2,175,127	+				+0.8
2,175,127	+				-0.5
2,175,128	-				-0.2
2,175,216	+				-1.2
2,175,218	+				+0.8
2,175,218	+				+0.2
2,175,240	+				+1.2
2,175,355	+				+0.6
2,175,356	-				-1.1
2,175,356	-				-2.1
2,175,416	+		Psyr_1900	0.15	-0.2
2,175,493	-		Psyr_1900	0.23	+1.2
2,175,493	-		Psyr_1900	0.23	-0.4
2,175,493	-		Psyr_1900	0.23	-1.1
2,175,621	+		Psyr_1900	0.36	+0.8
2,175,621	+		Psyr_1900	0.36	-0.5
2,175,622	-		Psyr_1900	0.36	+3.1