Experiment: Paraquat dichloride 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_904 and PfGW456L13_905 are separated by 194 nucleotides PfGW456L13_905 and PfGW456L13_906 are separated by 68 nucleotides PfGW456L13_906 and PfGW456L13_907 are separated by 8 nucleotides
PfGW456L13_904 - Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2), at 1,011,571 to 1,014,444
_904
PfGW456L13_905 - Ribonucleotide reductase, alpha subunit, at 1,014,639 to 1,014,956
_905
PfGW456L13_906 - Putative activity regulator of membrane protease YbbK, at 1,015,025 to 1,015,474
_906
PfGW456L13_907 - Putative stomatin/prohibitin-family membrane protease subunit YbbK, at 1,015,483 to 1,016,403
_907
Position (kb)
1015
1016 Strain fitness (log2 ratio)
-1
0
1 at 1014.082 kb on + strand, within PfGW456L13_904 at 1014.228 kb on + strand at 1014.229 kb on - strand at 1014.229 kb on - strand at 1014.229 kb on - strand at 1014.229 kb on - strand at 1014.270 kb on + strand at 1014.270 kb on + strand at 1014.270 kb on + strand at 1014.270 kb on + strand at 1014.271 kb on - strand at 1014.271 kb on - strand at 1014.271 kb on - strand at 1014.271 kb on - strand at 1014.307 kb on + strand at 1014.307 kb on + strand at 1014.307 kb on + strand at 1014.308 kb on - strand at 1014.308 kb on - strand at 1014.308 kb on - strand at 1014.358 kb on + strand at 1014.358 kb on + strand at 1014.359 kb on - strand at 1014.359 kb on - strand at 1014.359 kb on - strand at 1014.391 kb on + strand at 1014.391 kb on + strand at 1014.391 kb on + strand at 1014.436 kb on + strand at 1014.461 kb on + strand at 1014.461 kb on + strand at 1014.461 kb on + strand at 1014.461 kb on + strand at 1014.462 kb on - strand at 1014.462 kb on - strand at 1014.462 kb on - strand at 1014.462 kb on - strand at 1014.519 kb on - strand at 1014.838 kb on + strand, within PfGW456L13_905 at 1014.838 kb on + strand, within PfGW456L13_905 at 1014.839 kb on - strand, within PfGW456L13_905 at 1014.866 kb on + strand, within PfGW456L13_905 at 1014.866 kb on + strand, within PfGW456L13_905 at 1014.866 kb on + strand, within PfGW456L13_905 at 1014.866 kb on + strand, within PfGW456L13_905 at 1014.866 kb on + strand, within PfGW456L13_905 at 1014.867 kb on - strand, within PfGW456L13_905 at 1014.867 kb on - strand, within PfGW456L13_905 at 1014.867 kb on - strand, within PfGW456L13_905 at 1014.867 kb on - strand, within PfGW456L13_905 at 1014.867 kb on - strand, within PfGW456L13_905 at 1014.867 kb on - strand, within PfGW456L13_905 at 1014.876 kb on - strand, within PfGW456L13_905 at 1014.876 kb on - strand, within PfGW456L13_905 at 1014.983 kb on - strand at 1015.026 kb on + strand at 1015.027 kb on - strand at 1015.027 kb on - strand at 1015.027 kb on - strand at 1015.263 kb on + strand, within PfGW456L13_906 at 1015.264 kb on - strand, within PfGW456L13_906 at 1015.264 kb on - strand, within PfGW456L13_906 at 1015.418 kb on + strand, within PfGW456L13_906 at 1015.418 kb on + strand, within PfGW456L13_906 at 1015.419 kb on - strand, within PfGW456L13_906 at 1015.622 kb on + strand, within PfGW456L13_907 at 1015.622 kb on + strand, within PfGW456L13_907 at 1015.622 kb on + strand, within PfGW456L13_907 at 1015.622 kb on + strand, within PfGW456L13_907 at 1015.622 kb on + strand, within PfGW456L13_907 at 1015.623 kb on - strand, within PfGW456L13_907 at 1015.623 kb on - strand, within PfGW456L13_907 at 1015.623 kb on - strand, within PfGW456L13_907 at 1015.623 kb on - strand, within PfGW456L13_907 at 1015.623 kb on - strand, within PfGW456L13_907 at 1015.623 kb on - strand, within PfGW456L13_907 at 1015.640 kb on + strand, within PfGW456L13_907 at 1015.640 kb on + strand, within PfGW456L13_907 at 1015.641 kb on - strand, within PfGW456L13_907 at 1015.641 kb on - strand, within PfGW456L13_907 at 1015.641 kb on - strand, within PfGW456L13_907 at 1015.641 kb on - strand, within PfGW456L13_907 at 1016.175 kb on + strand, within PfGW456L13_907 at 1016.197 kb on - strand, within PfGW456L13_907 at 1016.454 kb on + strand at 1016.454 kb on + strand at 1016.454 kb on + strand at 1016.454 kb on + strand at 1016.454 kb on + strand at 1016.454 kb on + strand at 1016.455 kb on - strand at 1016.455 kb on - strand at 1016.455 kb on - strand at 1016.455 kb on - strand at 1016.455 kb on - strand at 1016.455 kb on - strand at 1016.455 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.032 mg/ml remove 1,014,082 + PfGW456L13_904 0.87 +0.3 1,014,228 + +0.3 1,014,229 - +1.2 1,014,229 - +0.2 1,014,229 - -1.6 1,014,229 - +0.4 1,014,270 + -0.3 1,014,270 + -0.0 1,014,270 + +0.3 1,014,270 + -1.2 1,014,271 - +1.0 1,014,271 - +0.7 1,014,271 - +0.0 1,014,271 - +1.1 1,014,307 + -1.1 1,014,307 + -0.2 1,014,307 + -0.1 1,014,308 - +0.2 1,014,308 - +0.1 1,014,308 - -0.1 1,014,358 + +0.7 1,014,358 + +0.5 1,014,359 - +0.5 1,014,359 - +0.1 1,014,359 - +0.0 1,014,391 + +1.3 1,014,391 + -0.1 1,014,391 + +0.6 1,014,436 + -0.2 1,014,461 + +0.4 1,014,461 + -0.4 1,014,461 + +0.2 1,014,461 + -0.4 1,014,462 - -0.5 1,014,462 - +1.4 1,014,462 - -0.7 1,014,462 - +0.4 1,014,519 - +0.3 1,014,838 + PfGW456L13_905 0.63 +0.7 1,014,838 + PfGW456L13_905 0.63 -0.6 1,014,839 - PfGW456L13_905 0.63 +0.9 1,014,866 + PfGW456L13_905 0.71 -0.9 1,014,866 + PfGW456L13_905 0.71 -0.1 1,014,866 + PfGW456L13_905 0.71 +0.1 1,014,866 + PfGW456L13_905 0.71 +0.0 1,014,866 + PfGW456L13_905 0.71 +0.1 1,014,867 - PfGW456L13_905 0.72 +0.0 1,014,867 - PfGW456L13_905 0.72 +0.2 1,014,867 - PfGW456L13_905 0.72 +1.5 1,014,867 - PfGW456L13_905 0.72 +1.0 1,014,867 - PfGW456L13_905 0.72 +0.2 1,014,867 - PfGW456L13_905 0.72 -0.8 1,014,876 - PfGW456L13_905 0.75 +0.3 1,014,876 - PfGW456L13_905 0.75 -0.2 1,014,983 - +0.1 1,015,026 + -0.1 1,015,027 - +0.5 1,015,027 - +0.8 1,015,027 - -0.7 1,015,263 + PfGW456L13_906 0.53 -0.3 1,015,264 - PfGW456L13_906 0.53 +1.1 1,015,264 - PfGW456L13_906 0.53 +0.5 1,015,418 + PfGW456L13_906 0.87 -0.6 1,015,418 + PfGW456L13_906 0.87 +0.8 1,015,419 - PfGW456L13_906 0.88 +0.7 1,015,622 + PfGW456L13_907 0.15 +0.7 1,015,622 + PfGW456L13_907 0.15 +0.6 1,015,622 + PfGW456L13_907 0.15 +1.2 1,015,622 + PfGW456L13_907 0.15 -1.0 1,015,622 + PfGW456L13_907 0.15 -1.1 1,015,623 - PfGW456L13_907 0.15 +0.9 1,015,623 - PfGW456L13_907 0.15 -0.2 1,015,623 - PfGW456L13_907 0.15 -0.1 1,015,623 - PfGW456L13_907 0.15 -0.4 1,015,623 - PfGW456L13_907 0.15 +0.2 1,015,623 - PfGW456L13_907 0.15 -1.2 1,015,640 + PfGW456L13_907 0.17 +0.7 1,015,640 + PfGW456L13_907 0.17 +0.9 1,015,641 - PfGW456L13_907 0.17 +0.7 1,015,641 - PfGW456L13_907 0.17 -0.2 1,015,641 - PfGW456L13_907 0.17 -0.7 1,015,641 - PfGW456L13_907 0.17 +0.3 1,016,175 + PfGW456L13_907 0.75 -0.4 1,016,197 - PfGW456L13_907 0.78 -0.5 1,016,454 + -0.0 1,016,454 + +0.6 1,016,454 + -0.1 1,016,454 + -0.6 1,016,454 + +0.5 1,016,454 + -0.1 1,016,455 - +1.1 1,016,455 - +0.1 1,016,455 - -0.4 1,016,455 - +0.1 1,016,455 - -0.0 1,016,455 - -0.1 1,016,455 - -0.0
Or see this region's nucleotide sequence