Experiment: Paraquat dichloride 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_860 and PfGW456L13_861 are separated by 177 nucleotides PfGW456L13_861 and PfGW456L13_862 are separated by 60 nucleotides PfGW456L13_862 and PfGW456L13_863 are separated by 192 nucleotides
PfGW456L13_860 - Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation, at 966,955 to 967,506
_860
PfGW456L13_861 - Regulator of sigma D, at 967,684 to 968,142
_861
PfGW456L13_862 - Macrophage infectivity potentiator, at 968,203 to 968,868
_862
PfGW456L13_863 - Twin-arginine translocation protein TatB, at 969,061 to 970,206
_863
Position (kb) 968
969 Strain fitness (log2 ratio) -2
-1
0
1 at 967.307 kb on + strand, within PfGW456L13_860 at 967.308 kb on - strand, within PfGW456L13_860 at 967.423 kb on + strand, within PfGW456L13_860 at 967.505 kb on - strand at 967.514 kb on + strand at 967.514 kb on + strand at 967.514 kb on + strand at 967.515 kb on - strand at 967.515 kb on - strand at 967.515 kb on - strand at 967.515 kb on - strand at 967.515 kb on - strand at 967.515 kb on - strand at 967.515 kb on - strand at 967.524 kb on - strand at 967.524 kb on - strand at 967.534 kb on + strand at 967.534 kb on + strand at 967.535 kb on - strand at 967.561 kb on + strand at 967.589 kb on + strand at 967.589 kb on + strand at 967.589 kb on + strand at 967.589 kb on + strand at 967.589 kb on + strand at 967.589 kb on + strand at 967.589 kb on + strand at 967.589 kb on + strand at 967.589 kb on + strand at 967.589 kb on + strand at 967.590 kb on - strand at 967.590 kb on - strand at 967.590 kb on - strand at 967.590 kb on - strand at 967.590 kb on - strand at 967.590 kb on - strand at 967.590 kb on - strand at 967.630 kb on + strand at 967.630 kb on + strand at 967.630 kb on + strand at 967.630 kb on + strand at 967.630 kb on + strand at 967.631 kb on - strand at 967.631 kb on - strand at 967.631 kb on - strand at 967.631 kb on - strand at 967.649 kb on + strand at 967.650 kb on - strand at 967.780 kb on + strand, within PfGW456L13_861 at 967.780 kb on + strand, within PfGW456L13_861 at 967.781 kb on - strand, within PfGW456L13_861 at 967.781 kb on - strand, within PfGW456L13_861 at 967.861 kb on + strand, within PfGW456L13_861 at 967.861 kb on + strand, within PfGW456L13_861 at 967.861 kb on + strand, within PfGW456L13_861 at 967.861 kb on + strand, within PfGW456L13_861 at 967.862 kb on - strand, within PfGW456L13_861 at 967.862 kb on - strand, within PfGW456L13_861 at 967.862 kb on - strand, within PfGW456L13_861 at 967.862 kb on - strand, within PfGW456L13_861 at 967.866 kb on - strand, within PfGW456L13_861 at 967.888 kb on + strand, within PfGW456L13_861 at 967.888 kb on + strand, within PfGW456L13_861 at 967.889 kb on - strand, within PfGW456L13_861 at 967.889 kb on - strand, within PfGW456L13_861 at 967.957 kb on + strand, within PfGW456L13_861 at 968.019 kb on + strand, within PfGW456L13_861 at 968.019 kb on + strand, within PfGW456L13_861 at 968.019 kb on + strand, within PfGW456L13_861 at 968.019 kb on + strand, within PfGW456L13_861 at 968.019 kb on + strand, within PfGW456L13_861 at 968.019 kb on + strand, within PfGW456L13_861 at 968.019 kb on + strand, within PfGW456L13_861 at 968.019 kb on + strand, within PfGW456L13_861 at 968.020 kb on - strand, within PfGW456L13_861 at 968.020 kb on - strand, within PfGW456L13_861 at 968.020 kb on - strand, within PfGW456L13_861 at 968.020 kb on - strand, within PfGW456L13_861 at 968.020 kb on - strand, within PfGW456L13_861 at 968.020 kb on - strand, within PfGW456L13_861 at 968.020 kb on - strand, within PfGW456L13_861 at 968.020 kb on - strand, within PfGW456L13_861 at 968.020 kb on - strand, within PfGW456L13_861 at 968.020 kb on - strand, within PfGW456L13_861 at 968.020 kb on - strand, within PfGW456L13_861 at 968.020 kb on - strand, within PfGW456L13_861 at 968.020 kb on - strand, within PfGW456L13_861 at 968.285 kb on + strand, within PfGW456L13_862 at 968.285 kb on + strand, within PfGW456L13_862 at 968.286 kb on - strand, within PfGW456L13_862 at 968.286 kb on - strand, within PfGW456L13_862 at 968.286 kb on - strand, within PfGW456L13_862 at 968.437 kb on - strand, within PfGW456L13_862 at 968.438 kb on + strand, within PfGW456L13_862 at 968.438 kb on + strand, within PfGW456L13_862 at 968.438 kb on + strand, within PfGW456L13_862 at 968.438 kb on + strand, within PfGW456L13_862 at 968.438 kb on + strand, within PfGW456L13_862 at 968.438 kb on + strand, within PfGW456L13_862 at 968.438 kb on + strand, within PfGW456L13_862 at 968.438 kb on + strand, within PfGW456L13_862 at 968.438 kb on + strand, within PfGW456L13_862 at 968.438 kb on + strand, within PfGW456L13_862 at 968.438 kb on + strand, within PfGW456L13_862 at 968.439 kb on - strand, within PfGW456L13_862 at 968.439 kb on - strand, within PfGW456L13_862 at 968.439 kb on - strand, within PfGW456L13_862 at 968.439 kb on - strand, within PfGW456L13_862 at 968.439 kb on - strand, within PfGW456L13_862 at 968.439 kb on - strand, within PfGW456L13_862 at 968.439 kb on - strand, within PfGW456L13_862 at 968.439 kb on - strand, within PfGW456L13_862 at 968.439 kb on - strand, within PfGW456L13_862 at 968.439 kb on - strand, within PfGW456L13_862 at 968.439 kb on - strand, within PfGW456L13_862 at 968.439 kb on - strand, within PfGW456L13_862 at 968.481 kb on + strand, within PfGW456L13_862 at 968.481 kb on + strand, within PfGW456L13_862 at 968.482 kb on - strand, within PfGW456L13_862 at 968.638 kb on + strand, within PfGW456L13_862 at 968.638 kb on + strand, within PfGW456L13_862 at 968.639 kb on - strand, within PfGW456L13_862 at 968.639 kb on - strand, within PfGW456L13_862 at 968.639 kb on - strand, within PfGW456L13_862 at 968.639 kb on - strand, within PfGW456L13_862 at 968.639 kb on - strand, within PfGW456L13_862 at 968.685 kb on - strand, within PfGW456L13_862 at 968.685 kb on - strand, within PfGW456L13_862 at 968.774 kb on + strand, within PfGW456L13_862 at 968.774 kb on + strand, within PfGW456L13_862 at 968.775 kb on - strand, within PfGW456L13_862 at 968.775 kb on - strand, within PfGW456L13_862 at 968.775 kb on - strand, within PfGW456L13_862 at 968.859 kb on - strand at 968.899 kb on + strand at 968.900 kb on - strand at 969.023 kb on + strand at 969.023 kb on + strand at 969.023 kb on + strand at 969.023 kb on + strand at 969.023 kb on + strand at 969.023 kb on + strand at 969.023 kb on + strand at 969.023 kb on + strand at 969.023 kb on + strand at 969.023 kb on + strand at 969.024 kb on - strand at 969.024 kb on - strand at 969.024 kb on - strand at 969.024 kb on - strand at 969.026 kb on + strand at 969.026 kb on + strand at 969.026 kb on + strand at 969.027 kb on - strand at 969.055 kb on + strand at 969.055 kb on + strand at 969.056 kb on - strand at 969.056 kb on - strand at 969.056 kb on - strand at 969.056 kb on - strand at 969.056 kb on - strand at 969.083 kb on + strand at 969.083 kb on + strand at 969.362 kb on - strand at 969.425 kb on + strand, within PfGW456L13_863 at 969.426 kb on - strand, within PfGW456L13_863 at 969.426 kb on - strand, within PfGW456L13_863 at 969.426 kb on - strand, within PfGW456L13_863 at 969.681 kb on + strand, within PfGW456L13_863 at 969.682 kb on - strand, within PfGW456L13_863 at 969.682 kb on - strand, within PfGW456L13_863 at 969.682 kb on - strand, within PfGW456L13_863 at 969.682 kb on - strand, within PfGW456L13_863
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.032 mg/ml remove 967,307 + PfGW456L13_860 0.64 -0.7 967,308 - PfGW456L13_860 0.64 +0.1 967,423 + PfGW456L13_860 0.85 +0.7 967,505 - +0.5 967,514 + -0.5 967,514 + +0.1 967,514 + +0.3 967,515 - -0.3 967,515 - -1.1 967,515 - -0.2 967,515 - +0.4 967,515 - -0.8 967,515 - +1.2 967,515 - +1.1 967,524 - +0.6 967,524 - +0.5 967,534 + +0.2 967,534 + +0.1 967,535 - -0.5 967,561 + -0.1 967,589 + -0.0 967,589 + -1.2 967,589 + -0.1 967,589 + +1.0 967,589 + +0.6 967,589 + -0.2 967,589 + -2.1 967,589 + +0.3 967,589 + -1.1 967,589 + -2.1 967,590 - -0.1 967,590 - -0.0 967,590 - +0.1 967,590 - -1.1 967,590 - +0.3 967,590 - +0.1 967,590 - -0.4 967,630 + -0.1 967,630 + +1.5 967,630 + -0.3 967,630 + +0.4 967,630 + +0.8 967,631 - -0.5 967,631 - +0.1 967,631 - -0.4 967,631 - -0.3 967,649 + +0.6 967,650 - -0.1 967,780 + PfGW456L13_861 0.21 +0.1 967,780 + PfGW456L13_861 0.21 +0.7 967,781 - PfGW456L13_861 0.21 +0.1 967,781 - PfGW456L13_861 0.21 +1.2 967,861 + PfGW456L13_861 0.39 -0.2 967,861 + PfGW456L13_861 0.39 -0.2 967,861 + PfGW456L13_861 0.39 -0.9 967,861 + PfGW456L13_861 0.39 -0.8 967,862 - PfGW456L13_861 0.39 -0.6 967,862 - PfGW456L13_861 0.39 -0.6 967,862 - PfGW456L13_861 0.39 -0.2 967,862 - PfGW456L13_861 0.39 +1.1 967,866 - PfGW456L13_861 0.40 +0.2 967,888 + PfGW456L13_861 0.44 +0.3 967,888 + PfGW456L13_861 0.44 +0.9 967,889 - PfGW456L13_861 0.45 -0.7 967,889 - PfGW456L13_861 0.45 -0.4 967,957 + PfGW456L13_861 0.59 -1.0 968,019 + PfGW456L13_861 0.73 -0.4 968,019 + PfGW456L13_861 0.73 -0.6 968,019 + PfGW456L13_861 0.73 +0.9 968,019 + PfGW456L13_861 0.73 +1.2 968,019 + PfGW456L13_861 0.73 +1.2 968,019 + PfGW456L13_861 0.73 +0.3 968,019 + PfGW456L13_861 0.73 +0.7 968,019 + PfGW456L13_861 0.73 +0.6 968,020 - PfGW456L13_861 0.73 -0.3 968,020 - PfGW456L13_861 0.73 +0.1 968,020 - PfGW456L13_861 0.73 +0.1 968,020 - PfGW456L13_861 0.73 +0.8 968,020 - PfGW456L13_861 0.73 +0.4 968,020 - PfGW456L13_861 0.73 +0.6 968,020 - PfGW456L13_861 0.73 -0.1 968,020 - PfGW456L13_861 0.73 +0.1 968,020 - PfGW456L13_861 0.73 +0.8 968,020 - PfGW456L13_861 0.73 -0.2 968,020 - PfGW456L13_861 0.73 +0.4 968,020 - PfGW456L13_861 0.73 +0.3 968,020 - PfGW456L13_861 0.73 -1.3 968,285 + PfGW456L13_862 0.12 +0.8 968,285 + PfGW456L13_862 0.12 -0.5 968,286 - PfGW456L13_862 0.12 -0.5 968,286 - PfGW456L13_862 0.12 +0.5 968,286 - PfGW456L13_862 0.12 -1.3 968,437 - PfGW456L13_862 0.35 -0.3 968,438 + PfGW456L13_862 0.35 +0.2 968,438 + PfGW456L13_862 0.35 +0.2 968,438 + PfGW456L13_862 0.35 -0.7 968,438 + PfGW456L13_862 0.35 +0.1 968,438 + PfGW456L13_862 0.35 +1.0 968,438 + PfGW456L13_862 0.35 +0.2 968,438 + PfGW456L13_862 0.35 -0.3 968,438 + PfGW456L13_862 0.35 -1.6 968,438 + PfGW456L13_862 0.35 +0.7 968,438 + PfGW456L13_862 0.35 +0.9 968,438 + PfGW456L13_862 0.35 +0.8 968,439 - PfGW456L13_862 0.35 -1.0 968,439 - PfGW456L13_862 0.35 +0.5 968,439 - PfGW456L13_862 0.35 +0.1 968,439 - PfGW456L13_862 0.35 -0.5 968,439 - PfGW456L13_862 0.35 +0.6 968,439 - PfGW456L13_862 0.35 +0.5 968,439 - PfGW456L13_862 0.35 -0.7 968,439 - PfGW456L13_862 0.35 -0.4 968,439 - PfGW456L13_862 0.35 -0.6 968,439 - PfGW456L13_862 0.35 +0.0 968,439 - PfGW456L13_862 0.35 -0.5 968,439 - PfGW456L13_862 0.35 +0.2 968,481 + PfGW456L13_862 0.42 +1.0 968,481 + PfGW456L13_862 0.42 +0.7 968,482 - PfGW456L13_862 0.42 -0.8 968,638 + PfGW456L13_862 0.65 +0.5 968,638 + PfGW456L13_862 0.65 +0.0 968,639 - PfGW456L13_862 0.65 +0.1 968,639 - PfGW456L13_862 0.65 -0.3 968,639 - PfGW456L13_862 0.65 -0.3 968,639 - PfGW456L13_862 0.65 -0.6 968,639 - PfGW456L13_862 0.65 -0.2 968,685 - PfGW456L13_862 0.72 +0.1 968,685 - PfGW456L13_862 0.72 -0.7 968,774 + PfGW456L13_862 0.86 -0.0 968,774 + PfGW456L13_862 0.86 +0.5 968,775 - PfGW456L13_862 0.86 -0.2 968,775 - PfGW456L13_862 0.86 -0.1 968,775 - PfGW456L13_862 0.86 -0.0 968,859 - +0.2 968,899 + -0.2 968,900 - -0.7 969,023 + -0.5 969,023 + +0.2 969,023 + -0.1 969,023 + +1.6 969,023 + -0.3 969,023 + -0.7 969,023 + +0.3 969,023 + -0.4 969,023 + +0.8 969,023 + -0.2 969,024 - -1.1 969,024 - -0.3 969,024 - +0.4 969,024 - +0.2 969,026 + -0.2 969,026 + +1.4 969,026 + -0.7 969,027 - -0.5 969,055 + +1.0 969,055 + +0.0 969,056 - -1.6 969,056 - -2.4 969,056 - +0.7 969,056 - +0.2 969,056 - -2.3 969,083 + +1.0 969,083 + +0.6 969,362 - +0.2 969,425 + PfGW456L13_863 0.32 +0.1 969,426 - PfGW456L13_863 0.32 +0.8 969,426 - PfGW456L13_863 0.32 +0.5 969,426 - PfGW456L13_863 0.32 +0.5 969,681 + PfGW456L13_863 0.54 -0.1 969,682 - PfGW456L13_863 0.54 +0.4 969,682 - PfGW456L13_863 0.54 -0.2 969,682 - PfGW456L13_863 0.54 +0.3 969,682 - PfGW456L13_863 0.54 +0.3
Or see this region's nucleotide sequence